Wall clock time and date at job start Sun Mar 7 2021 15:05:38 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46503 * 1 3 3 C 1.33864 * 124.19297 * 2 1 4 4 O 1.21543 * 123.79115 * 0.03179 * 3 2 1 5 5 N 1.34668 * 112.41977 * 179.76467 * 3 2 1 6 6 C 1.46862 * 106.42757 * 0.22691 * 5 3 2 7 7 C 1.52461 * 110.48834 * 241.45833 * 6 5 3 8 8 C 1.53083 * 109.58419 * 178.66514 * 7 6 5 9 9 C 1.53011 * 109.41838 * 59.14377 * 8 7 6 10 10 N 1.46499 * 109.46522 * 179.51622 * 9 8 7 11 11 C 1.34778 * 120.00316 * 275.04319 * 10 9 8 12 12 O 1.21591 * 119.99717 * 359.97438 * 11 10 9 13 13 C 1.47571 * 120.00059 * 179.97438 * 11 10 9 14 14 C 1.40207 * 119.83221 * 359.97438 * 13 11 10 15 15 C 1.36238 * 120.38016 * 179.97438 * 14 13 11 16 16 C 1.39877 * 119.95894 * 0.02562 * 15 14 13 17 17 C 1.46253 * 133.84278 * 180.02562 * 16 15 14 18 18 C 1.50700 * 126.48406 * 359.97438 * 17 16 15 19 19 O 1.42900 * 109.46979 * 75.00157 * 18 17 16 20 20 Si 1.86298 * 109.47191 * 195.00451 * 18 17 16 21 21 C 1.34457 * 107.03648 * 179.97438 * 17 16 15 22 22 N 1.36561 * 109.98276 * 0.02562 * 21 17 16 23 23 C 1.37828 * 109.86090 * 359.97438 * 22 21 17 24 24 C 1.38649 * 133.37739 * 180.32700 * 23 22 21 25 25 C 1.52997 * 109.50933 * 299.53128 * 9 8 7 26 26 C 1.52477 * 110.48719 * 118.54255 * 6 5 3 27 27 C 1.34915 * 124.19445 * 180.18243 * 2 1 3 28 28 O 1.21231 * 127.25540 * 359.97438 * 27 2 1 29 29 H 1.08994 * 109.47505 * 0.02919 * 1 2 3 30 30 H 1.09004 * 109.46708 * 120.03202 * 1 2 3 31 31 H 1.09001 * 109.47423 * 240.02362 * 1 2 3 32 32 H 0.97002 * 126.79302 * 180.22541 * 5 3 2 33 33 H 1.09001 * 109.45356 * 298.69746 * 7 6 5 34 34 H 1.08995 * 109.45664 * 58.62910 * 7 6 5 35 35 H 1.09000 * 109.47786 * 299.16452 * 8 7 6 36 36 H 1.08993 * 109.48162 * 179.13373 * 8 7 6 37 37 H 1.09005 * 109.46270 * 59.54186 * 9 8 7 38 38 H 0.97004 * 119.99756 * 95.03680 * 10 9 8 39 39 H 1.08000 * 119.81153 * 0.02647 * 14 13 11 40 40 H 1.07996 * 120.01717 * 179.97438 * 15 14 13 41 41 H 1.09006 * 109.47009 * 315.00385 * 18 17 16 42 42 H 0.96701 * 114.00040 * 60.00327 * 19 18 17 43 43 H 1.48502 * 110.00190 * 58.68021 * 20 18 17 44 44 H 1.48496 * 110.00059 * 179.97438 * 20 18 17 45 45 H 1.08001 * 125.00782 * 180.02562 * 21 17 16 46 46 H 0.97005 * 125.06936 * 180.02562 * 22 21 17 47 47 H 1.08003 * 120.17097 * 359.93733 * 24 23 22 48 48 H 1.08992 * 109.48152 * 300.48271 * 25 9 8 49 49 H 1.09005 * 109.48621 * 180.45305 * 25 9 8 50 50 H 1.08997 * 109.45140 * 301.37437 * 26 6 5 51 51 H 1.09005 * 109.44254 * 61.29636 * 26 6 5 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 6 2.2173 1.1073 0.0000 4 8 1.7617 2.2341 0.0006 5 7 3.5357 0.8325 0.0051 6 6 3.6548 -0.6313 0.0033 7 6 4.3730 -1.1098 1.2602 8 6 4.4564 -2.6383 1.2531 9 6 5.2126 -3.1007 0.0059 10 7 5.3031 -4.5629 0.0040 11 6 6.2958 -5.1777 0.6771 12 8 7.1167 -4.5186 1.2856 13 6 6.3865 -6.6506 0.6756 14 6 5.4377 -7.4071 -0.0268 15 6 5.5112 -8.7675 -0.0362 16 6 6.5374 -9.4164 0.6583 17 6 6.9004 -10.8200 0.8507 18 6 6.1789 -12.0174 0.2880 19 8 6.4690 -12.1365 -1.1062 20 14 6.7443 -13.5559 1.1736 21 6 7.9997 -10.8401 1.6247 22 7 8.3693 -9.5647 1.9436 23 6 7.4961 -8.6665 1.3685 24 6 7.4168 -7.2823 1.3687 25 6 4.4670 -2.6343 -1.2460 26 6 4.3836 -1.1058 -1.2491 27 6 2.2233 -1.1159 -0.0036 28 8 1.8376 -2.2652 -0.0068 29 1 -0.3634 1.0276 -0.0005 30 1 -0.3633 -0.5144 -0.8898 31 1 -0.3634 -0.5135 0.8902 32 1 4.2629 1.4744 0.0092 33 1 5.3793 -0.6915 1.2848 34 1 3.8218 -0.7804 2.1409 35 1 3.4501 -3.0571 1.2441 36 1 4.9835 -2.9777 2.1446 37 1 6.2160 -2.6749 0.0109 38 1 4.6483 -5.0887 -0.4817 39 1 4.6446 -6.9085 -0.5642 40 1 4.7770 -9.3444 -0.5788 41 1 5.1049 -11.8925 0.4262 42 1 7.4087 -12.2506 -1.3041 43 1 6.4771 -13.4313 2.6290 44 1 6.0396 -14.7438 0.6282 45 1 8.5146 -11.7332 1.9466 46 1 9.1329 -9.3264 2.4923 47 1 8.1484 -6.6967 1.9055 48 1 3.4608 -3.0532 -1.2470 49 1 5.0018 -2.9708 -2.1342 50 1 3.8398 -0.7736 -2.1334 51 1 5.3900 -0.6873 -1.2638 There are 73 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 73 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_17849352_12335838.mol2 51 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 15:05:38 Heat of formation + Delta-G solvation = -43.501062 kcal Electronic energy + Delta-G solvation = -37411.001339 eV Core-core repulsion = 32471.074503 eV Total energy + Delta-G solvation = -4939.926836 eV No. of doubly occupied orbitals = 73 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 399.167 amu Computer time = 1.69 seconds Orbital eigenvalues (eV) -43.86371 -42.43500 -41.09989 -40.05401 -38.83747 -37.86181 -37.44285 -37.22386 -36.00080 -34.14353 -33.22110 -32.12807 -30.98493 -30.69554 -29.37717 -28.93950 -26.46731 -25.46600 -24.44558 -24.10270 -23.61363 -23.02697 -22.44418 -21.37832 -20.81377 -20.54660 -19.35590 -19.15345 -18.38118 -18.04905 -17.85665 -17.50366 -17.20525 -16.92604 -16.68028 -16.56228 -16.23714 -16.18911 -15.88270 -15.68591 -15.54078 -15.37980 -15.05401 -14.98087 -14.81467 -14.73622 -14.47531 -14.28105 -14.15945 -14.00607 -13.83482 -13.70678 -13.54060 -13.41680 -13.09672 -12.83535 -12.64853 -12.30440 -12.27350 -12.26650 -12.20692 -11.97469 -11.91607 -11.80593 -11.06624 -10.94166 -10.90345 -10.76461 -10.51494 -10.28451 -10.13644 -9.34447 -8.76975 -4.96938 -0.29929 0.38490 0.45205 1.13341 1.39855 1.43846 1.72226 1.83080 1.91143 1.94509 2.02743 2.06398 2.28138 2.77835 2.88592 3.34758 3.40482 3.62176 3.65113 3.73098 3.76177 3.91265 3.91826 3.94471 3.97544 4.11142 4.14656 4.17958 4.32424 4.35169 4.37093 4.42060 4.46067 4.50276 4.54430 4.57315 4.58131 4.61079 4.71082 4.77900 4.81013 4.88910 4.97949 4.98260 5.03169 5.15899 5.21159 5.24351 5.42853 5.44987 5.54620 5.63246 5.73197 5.89610 5.99839 6.27621 6.48957 6.56867 6.91767 6.99493 7.15913 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.078 3.922 2 N -0.584 5.584 3 C 0.699 3.301 4 O -0.580 6.580 5 N -0.701 5.701 6 C 0.128 3.872 7 C -0.104 4.104 8 C -0.132 4.132 9 C 0.150 3.850 10 N -0.709 5.709 11 C 0.565 3.435 12 O -0.576 6.576 13 C -0.138 4.138 14 C -0.108 4.108 15 C -0.088 4.088 16 C -0.083 4.083 17 C -0.236 4.236 18 C -0.039 4.039 19 O -0.561 6.561 20 Si 0.795 3.205 21 C 0.096 3.904 22 N -0.577 5.577 23 C 0.066 3.934 24 C -0.065 4.065 25 C -0.128 4.128 26 C -0.104 4.104 27 C 0.528 3.472 28 O -0.470 6.470 29 H 0.094 0.906 30 H 0.089 0.911 31 H 0.086 0.914 32 H 0.452 0.548 33 H 0.108 0.892 34 H 0.074 0.926 35 H 0.073 0.927 36 H 0.063 0.937 37 H 0.087 0.913 38 H 0.412 0.588 39 H 0.149 0.851 40 H 0.134 0.866 41 H 0.095 0.905 42 H 0.393 0.607 43 H -0.285 1.285 44 H -0.306 1.306 45 H 0.219 0.781 46 H 0.435 0.565 47 H 0.131 0.869 48 H 0.080 0.920 49 H 0.096 0.904 50 H 0.086 0.914 51 H 0.113 0.887 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 5.037 -4.314 -1.203 6.740 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.062 4.062 2 N -0.331 5.331 3 C 0.400 3.600 4 O -0.457 6.457 5 N -0.365 5.365 6 C 0.037 3.963 7 C -0.143 4.143 8 C -0.171 4.171 9 C 0.046 3.954 10 N -0.360 5.360 11 C 0.353 3.647 12 O -0.457 6.457 13 C -0.142 4.142 14 C -0.128 4.128 15 C -0.107 4.107 16 C -0.088 4.088 17 C -0.243 4.243 18 C -0.149 4.149 19 O -0.369 6.369 20 Si 0.701 3.299 21 C -0.033 4.033 22 N -0.180 5.180 23 C -0.041 4.041 24 C -0.087 4.087 25 C -0.166 4.166 26 C -0.143 4.143 27 C 0.316 3.684 28 O -0.340 6.340 29 H 0.113 0.887 30 H 0.108 0.892 31 H 0.105 0.895 32 H 0.300 0.700 33 H 0.127 0.873 34 H 0.093 0.907 35 H 0.092 0.908 36 H 0.081 0.919 37 H 0.105 0.895 38 H 0.250 0.750 39 H 0.166 0.834 40 H 0.152 0.848 41 H 0.112 0.888 42 H 0.243 0.757 43 H -0.212 1.212 44 H -0.234 1.234 45 H 0.235 0.765 46 H 0.276 0.724 47 H 0.149 0.851 48 H 0.099 0.901 49 H 0.115 0.885 50 H 0.104 0.896 51 H 0.131 0.869 Dipole moment (debyes) X Y Z Total from point charges 4.278 -4.441 -0.260 6.172 hybrid contribution -0.551 0.829 0.193 1.013 sum 3.728 -3.612 -0.067 5.191 Atomic orbital electron populations 1.22035 0.74180 1.05395 1.04597 1.46462 1.10414 1.07912 1.68279 1.16086 0.83054 0.83741 0.77161 1.91018 1.76015 1.21788 1.56835 1.45533 1.05895 1.07462 1.77610 1.21197 0.93410 0.80932 1.00735 1.21592 1.02487 0.95865 0.94342 1.21962 1.01750 0.94734 0.98652 1.20997 1.00210 0.79221 0.95003 1.45857 1.29887 1.07826 1.52418 1.18284 0.80656 0.87563 0.78154 1.90756 1.42422 1.67375 1.45176 1.19491 0.98757 0.92185 1.03760 1.20894 0.98752 0.93671 0.99466 1.20385 0.97523 0.94131 0.98635 1.19570 0.96262 0.93549 0.99404 1.20850 1.01527 0.93075 1.08883 1.24541 1.00905 1.02611 0.86852 1.86462 1.32289 1.95826 1.22349 0.94080 0.88638 0.72200 0.75023 1.22354 0.95898 0.88136 0.96896 1.41811 1.26608 1.04456 1.45128 1.18128 0.94269 0.91055 1.00616 1.20148 0.98478 0.90715 0.99317 1.21873 1.02238 0.94937 0.97560 1.21640 1.02715 0.95814 0.94158 1.20978 0.88858 0.84571 0.74017 1.90757 1.79394 1.18050 1.45818 0.88704 0.89196 0.89525 0.70020 0.87339 0.90734 0.90806 0.91868 0.89457 0.75041 0.83389 0.84816 0.88751 0.75711 1.21225 1.23429 0.76464 0.72437 0.85094 0.90144 0.88527 0.89553 0.86899 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.08 -0.09 10.89 127.77 1.39 1.30 16 2 N -0.58 -1.10 3.01 -796.76 -2.40 -3.50 16 3 C 0.70 2.73 8.63 179.37 1.55 4.27 16 4 O -0.58 -6.82 17.24 -3.85 -0.07 -6.89 16 5 N -0.70 2.44 5.88 -442.69 -2.60 -0.16 16 6 C 0.13 -0.52 1.01 2.58 0.00 -0.52 16 7 C -0.10 0.43 5.10 30.44 0.16 0.58 16 8 C -0.13 0.08 5.25 30.63 0.16 0.24 16 9 C 0.15 -0.30 2.44 44.99 0.11 -0.19 16 10 N -0.71 0.26 5.03 -445.64 -2.24 -1.98 16 11 C 0.56 3.27 7.72 86.71 0.67 3.94 16 12 O -0.58 -7.17 15.97 -4.00 -0.06 -7.23 16 13 C -0.14 -0.63 5.87 -20.08 -0.12 -0.75 16 14 C -0.11 -0.14 9.46 22.28 0.21 0.07 16 15 C -0.09 -0.27 10.03 22.20 0.22 -0.05 16 16 C -0.08 -0.32 6.35 -20.14 -0.13 -0.44 16 17 C -0.24 0.14 5.57 -18.65 -0.10 0.04 16 18 C -0.04 0.05 3.06 71.24 0.22 0.27 16 19 O -0.56 0.00 12.88 -148.98 -1.92 -1.92 16 20 Si 0.79 -3.86 30.75 68.60 2.11 -1.75 16 21 C 0.10 -0.58 10.43 83.09 0.87 0.29 16 22 N -0.58 2.30 6.07 -187.71 -1.14 1.16 16 23 C 0.07 0.18 7.26 38.96 0.28 0.46 16 24 C -0.07 -0.32 9.61 22.63 0.22 -0.10 16 25 C -0.13 0.75 5.14 30.62 0.16 0.90 16 26 C -0.10 0.77 5.10 30.45 0.16 0.93 16 27 C 0.53 0.45 6.53 87.78 0.57 1.02 16 28 O -0.47 -1.94 13.94 -2.88 -0.04 -1.98 16 29 H 0.09 -0.02 7.45 -2.39 -0.02 -0.04 16 30 H 0.09 -0.31 8.14 -2.38 -0.02 -0.33 16 31 H 0.09 -0.24 8.14 -2.39 -0.02 -0.26 16 32 H 0.45 -3.58 8.96 -92.71 -0.83 -4.41 16 33 H 0.11 -0.78 8.14 -2.39 -0.02 -0.80 16 34 H 0.07 -0.21 8.14 -2.39 -0.02 -0.23 16 35 H 0.07 0.14 6.11 -2.39 -0.01 0.13 16 36 H 0.06 0.21 8.14 -2.39 -0.02 0.19 16 37 H 0.09 -0.02 7.58 -2.38 -0.02 -0.04 16 38 H 0.41 -1.86 6.59 -92.71 -0.61 -2.47 16 39 H 0.15 -0.68 6.36 -2.91 -0.02 -0.69 16 40 H 0.13 0.17 8.06 -2.91 -0.02 0.15 16 41 H 0.09 0.14 7.96 -2.38 -0.02 0.12 16 42 H 0.39 -3.32 8.70 -74.06 -0.64 -3.96 16 43 H -0.29 -0.01 7.11 99.48 0.71 0.70 16 44 H -0.31 -1.16 7.11 99.48 0.71 -0.45 16 45 H 0.22 -3.28 6.35 -2.91 -0.02 -3.30 16 46 H 0.44 -4.24 8.96 -92.70 -0.83 -5.07 16 47 H 0.13 0.64 7.62 -2.91 -0.02 0.61 16 48 H 0.08 -0.28 6.11 -2.39 -0.01 -0.29 16 49 H 0.10 -0.76 8.14 -2.38 -0.02 -0.78 16 50 H 0.09 -0.64 8.14 -2.39 -0.02 -0.66 16 51 H 0.11 -1.24 8.14 -2.38 -0.02 -1.26 16 Total: 0.00 -31.54 412.38 -3.59 -35.13 By element: Atomic # 1 Polarization: -21.33 SS G_CDS: -1.83 Total: -23.15 kcal Atomic # 6 Polarization: 5.67 SS G_CDS: 6.59 Total: 12.26 kcal Atomic # 7 Polarization: 3.91 SS G_CDS: -8.38 Total: -4.47 kcal Atomic # 8 Polarization: -15.93 SS G_CDS: -2.09 Total: -18.02 kcal Atomic # 14 Polarization: -3.86 SS G_CDS: 2.11 Total: -1.75 kcal Total: -31.54 -3.59 -35.13 kcal The number of atoms in the molecule is 51 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17849352_12335838.mol2 51 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -8.371 kcal (2) G-P(sol) polarization free energy of solvation -31.535 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -39.907 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -3.594 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -35.130 kcal (6) G-S(sol) free energy of system = (1) + (5) -43.501 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.69 seconds