Wall clock time and date at job start Sun Mar 7 2021 15:06:07 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46502 * 1 3 3 C 1.33873 * 124.19491 * 2 1 4 4 O 1.21543 * 123.78882 * 359.96089 * 3 2 1 5 5 N 1.34668 * 112.42210 * 179.69375 * 3 2 1 6 6 C 1.46847 * 106.42112 * 0.27168 * 5 3 2 7 7 C 1.52474 * 110.49025 * 241.43843 * 6 5 3 8 8 C 1.53095 * 109.51486 * 296.01556 * 7 6 5 9 9 C 1.52997 * 109.41704 * 300.83442 * 8 7 6 10 10 N 1.46505 * 109.45661 * 180.42687 * 9 8 7 11 11 C 1.34782 * 119.99899 * 84.89977 * 10 9 8 12 12 O 1.21551 * 119.99919 * 0.02562 * 11 10 9 13 13 C 1.47847 * 119.99867 * 180.02562 * 11 10 9 14 14 C 1.39540 * 120.13961 * 359.97438 * 13 11 10 15 15 C 1.38069 * 119.84239 * 180.02562 * 14 13 11 16 16 Br 1.89102 * 119.94017 * 179.97438 * 15 14 13 17 17 C 1.38430 * 120.12533 * 0.02562 * 15 14 13 18 18 C 1.38359 * 120.27877 * 359.97438 * 17 15 14 19 19 C 1.50698 * 119.92190 * 180.02562 * 18 17 15 20 20 O 1.42899 * 109.47385 * 245.00558 * 19 18 17 21 21 Si 1.86298 * 109.47046 * 5.00348 * 19 18 17 22 22 C 1.37950 * 120.15894 * 359.72697 * 18 17 15 23 23 C 1.53006 * 109.57143 * 60.39626 * 9 8 7 24 24 C 1.52472 * 110.48837 * 118.54997 * 6 5 3 25 25 C 1.34918 * 124.19877 * 180.17464 * 2 1 3 26 26 O 1.21232 * 127.25172 * 0.02562 * 25 2 1 27 27 H 1.09005 * 109.47023 * 0.02562 * 1 2 3 28 28 H 1.08992 * 109.47295 * 120.02653 * 1 2 3 29 29 H 1.09002 * 109.46914 * 240.02887 * 1 2 3 30 30 H 0.97003 * 126.79295 * 180.26969 * 5 3 2 31 31 H 1.08996 * 109.46541 * 56.02444 * 7 6 5 32 32 H 1.09001 * 109.46604 * 176.00106 * 7 6 5 33 33 H 1.09002 * 109.48147 * 180.85622 * 8 7 6 34 34 H 1.09002 * 109.48597 * 60.82031 * 8 7 6 35 35 H 1.09002 * 109.45518 * 300.36572 * 9 8 7 36 36 H 0.96995 * 120.00073 * 264.89888 * 10 9 8 37 37 H 1.07996 * 120.08181 * 359.97438 * 14 13 11 38 38 H 1.08000 * 119.85733 * 179.97438 * 17 15 14 39 39 H 1.09005 * 109.47148 * 125.00150 * 19 18 17 40 40 H 0.96696 * 114.00399 * 59.99659 * 20 19 18 41 41 H 1.48504 * 110.00255 * 58.67990 * 21 19 18 42 42 H 1.48503 * 110.00155 * 180.02562 * 21 19 18 43 43 H 1.08003 * 120.06331 * 180.27795 * 22 18 17 44 44 H 1.08997 * 109.48323 * 179.61336 * 23 9 8 45 45 H 1.09009 * 109.48385 * 59.58460 * 23 9 8 46 46 H 1.09004 * 109.46319 * 183.98645 * 24 6 5 47 47 H 1.08997 * 109.46734 * 303.96772 * 24 6 5 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 6 2.2174 1.1073 0.0000 4 8 1.7618 2.2341 -0.0007 5 7 3.5357 0.8325 0.0067 6 6 3.6548 -0.6311 0.0049 7 6 4.3719 -1.1098 1.2625 8 6 5.8074 -0.5778 1.2664 9 6 6.5389 -1.0787 0.0194 10 7 7.9159 -0.5784 0.0275 11 6 8.8720 -1.2476 0.7018 12 8 8.5919 -2.2664 1.3028 13 6 10.2615 -0.7425 0.7104 14 6 10.5863 0.4264 0.0210 15 6 11.8860 0.8923 0.0327 16 35 12.3294 2.4757 -0.9012 17 6 12.8653 0.2019 0.7259 18 6 12.5489 -0.9576 1.4112 19 6 13.6212 -1.7025 2.1637 20 8 13.8216 -2.9839 1.5639 21 14 15.2107 -0.7327 2.1021 22 6 11.2529 -1.4302 1.4124 23 6 5.8206 -0.5736 -1.2336 24 6 4.3851 -1.1056 -1.2466 25 6 2.2234 -1.1159 -0.0034 26 8 1.8377 -2.2652 -0.0073 27 1 -0.3633 1.0277 -0.0005 28 1 -0.3633 -0.5142 -0.8897 29 1 -0.3633 -0.5134 0.8903 30 1 4.2630 1.4745 0.0116 31 1 3.8457 -0.7414 2.1431 32 1 4.3883 -2.1995 1.2787 33 1 6.3242 -0.9329 2.1581 34 1 5.7913 0.5121 1.2652 35 1 6.5489 -2.1686 0.0177 36 1 8.1394 0.2343 -0.4524 37 1 9.8232 0.9650 -0.5211 38 1 13.8806 0.5700 0.7319 39 1 13.3141 -1.8312 3.2017 40 1 14.0969 -2.9460 0.6377 41 1 15.0075 0.6139 2.6942 42 1 16.2766 -1.4570 2.8402 43 1 11.0067 -2.3331 1.9516 44 1 6.3468 -0.9255 -2.1209 45 1 5.8043 0.5163 -1.2289 46 1 4.4019 -2.1954 -1.2660 47 1 3.8682 -0.7345 -2.1315 There are 69 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 69 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_17849352_12335870.mol2 47 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 15:06:07 Heat of formation + Delta-G solvation = -71.608799 kcal Electronic energy + Delta-G solvation = -34391.782693 eV Core-core repulsion = 29588.234823 eV Total energy + Delta-G solvation = -4803.547871 eV No. of doubly occupied orbitals = 69 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 438.067 amu Computer time = 1.37 seconds Orbital eigenvalues (eV) -43.85081 -41.64652 -40.34558 -39.85508 -39.10674 -37.66970 -37.09928 -36.02475 -34.23192 -33.59531 -32.88054 -32.13566 -30.44462 -30.20812 -28.82633 -27.01462 -25.85027 -24.70575 -24.15877 -23.27292 -22.79647 -21.78774 -21.41148 -20.96058 -19.24713 -19.00722 -18.08213 -17.97889 -17.71682 -17.56502 -17.29076 -16.71838 -16.61654 -16.57311 -16.37682 -16.12967 -15.90939 -15.53057 -15.50409 -15.33416 -15.05314 -14.93997 -14.45781 -14.33068 -14.30508 -14.10492 -13.79197 -13.57993 -13.48636 -13.39612 -13.24938 -13.09408 -12.99874 -12.35434 -12.22579 -12.05535 -11.97395 -11.96105 -11.90557 -11.65997 -11.47001 -11.29695 -11.07438 -10.98613 -10.56792 -10.54650 -10.33469 -10.09563 -9.89103 -5.05778 -0.49371 -0.14089 0.42119 0.45857 1.12431 1.21506 1.53967 1.59962 1.82971 1.89522 1.96294 2.01097 2.49179 2.77788 3.28731 3.29498 3.36738 3.40840 3.55646 3.69071 3.81668 3.89394 3.93156 3.95699 3.98045 4.08911 4.13696 4.22560 4.28829 4.30232 4.36104 4.37732 4.42345 4.49794 4.53491 4.61994 4.72085 4.77178 4.78327 4.87114 4.94193 4.96942 4.98913 5.08591 5.16331 5.17189 5.35481 5.42388 5.71727 5.88296 6.23198 6.39131 6.72159 6.99125 7.07120 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.078 3.922 2 N -0.584 5.584 3 C 0.701 3.299 4 O -0.578 6.578 5 N -0.696 5.696 6 C 0.132 3.868 7 C -0.106 4.106 8 C -0.121 4.121 9 C 0.142 3.858 10 N -0.705 5.705 11 C 0.562 3.438 12 O -0.569 6.569 13 C -0.135 4.135 14 C -0.042 4.042 15 C -0.100 4.100 16 Br -0.029 7.029 17 C -0.061 4.061 18 C -0.118 4.118 19 C -0.074 4.074 20 O -0.553 6.553 21 Si 0.769 3.231 22 C -0.031 4.031 23 C -0.115 4.115 24 C -0.107 4.107 25 C 0.529 3.471 26 O -0.486 6.486 27 H 0.097 0.903 28 H 0.088 0.912 29 H 0.086 0.914 30 H 0.450 0.550 31 H 0.077 0.923 32 H 0.090 0.910 33 H 0.063 0.937 34 H 0.086 0.914 35 H 0.079 0.921 36 H 0.416 0.584 37 H 0.166 0.834 38 H 0.156 0.844 39 H 0.112 0.888 40 H 0.397 0.603 41 H -0.278 1.278 42 H -0.295 1.295 43 H 0.129 0.871 44 H 0.098 0.902 45 H 0.094 0.906 46 H 0.094 0.906 47 H 0.090 0.910 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.717 3.237 -5.289 7.230 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.063 4.063 2 N -0.330 5.330 3 C 0.402 3.598 4 O -0.454 6.454 5 N -0.361 5.361 6 C 0.041 3.959 7 C -0.145 4.145 8 C -0.159 4.159 9 C 0.038 3.962 10 N -0.356 5.356 11 C 0.349 3.651 12 O -0.448 6.448 13 C -0.139 4.139 14 C -0.063 4.063 15 C -0.179 4.179 16 Br 0.057 6.943 17 C -0.080 4.080 18 C -0.119 4.119 19 C -0.184 4.184 20 O -0.361 6.361 21 Si 0.674 3.326 22 C -0.050 4.050 23 C -0.153 4.153 24 C -0.146 4.146 25 C 0.317 3.683 26 O -0.356 6.356 27 H 0.115 0.885 28 H 0.107 0.893 29 H 0.104 0.896 30 H 0.298 0.702 31 H 0.096 0.904 32 H 0.108 0.892 33 H 0.082 0.918 34 H 0.105 0.895 35 H 0.097 0.903 36 H 0.254 0.746 37 H 0.183 0.817 38 H 0.173 0.827 39 H 0.129 0.871 40 H 0.247 0.753 41 H -0.204 1.204 42 H -0.223 1.223 43 H 0.147 0.853 44 H 0.117 0.883 45 H 0.113 0.887 46 H 0.113 0.887 47 H 0.108 0.892 Dipole moment (debyes) X Y Z Total from point charges 3.530 3.289 -4.204 6.399 hybrid contribution -0.538 -0.087 0.742 0.920 sum 2.992 3.202 -3.462 5.585 Atomic orbital electron populations 1.22046 0.74160 1.05496 1.04580 1.46458 1.10460 1.07923 1.68137 1.16046 0.83033 0.83626 0.77117 1.91023 1.75999 1.21667 1.56738 1.45502 1.05667 1.07311 1.77627 1.21124 0.92677 0.81328 1.00742 1.21601 0.95709 1.02731 0.94507 1.21849 0.93468 1.02079 0.98518 1.21090 0.79779 0.99892 0.95459 1.45803 1.08187 1.29180 1.52480 1.18284 0.85187 0.83099 0.78500 1.90818 1.82961 1.26003 1.45063 1.19890 0.93614 0.97615 1.02817 1.21481 0.95532 0.93639 0.95615 1.21755 0.96115 0.96674 1.03376 1.96873 1.93867 1.29590 1.73958 1.21365 0.99653 0.93276 0.93715 1.20313 0.95351 0.96158 1.00077 1.25216 1.04734 0.90061 0.98346 1.86515 1.91015 1.26371 1.32168 0.93910 0.74119 0.75278 0.89333 1.21267 0.91415 0.98068 0.94297 1.21766 0.93484 1.02728 0.97315 1.21651 0.95581 1.03103 0.94285 1.21022 0.89110 0.84436 0.73781 1.90821 1.79669 1.18702 1.46384 0.88462 0.89301 0.89562 0.70188 0.90437 0.89192 0.91840 0.89504 0.90252 0.74586 0.81687 0.82668 0.87100 0.75278 1.20427 1.22254 0.85274 0.88345 0.88720 0.88737 0.89176 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.08 -0.11 10.89 127.77 1.39 1.28 16 2 N -0.58 -0.77 3.01 -796.76 -2.40 -3.17 16 3 C 0.70 1.62 8.63 179.37 1.55 3.17 16 4 O -0.58 -5.79 17.24 -3.85 -0.07 -5.85 16 5 N -0.70 3.78 5.23 -442.72 -2.31 1.47 16 6 C 0.13 -0.68 0.84 2.58 0.00 -0.68 16 7 C -0.11 0.54 4.98 30.45 0.15 0.69 16 8 C -0.12 0.79 5.38 30.62 0.16 0.95 16 9 C 0.14 -1.04 2.44 44.99 0.11 -0.93 16 10 N -0.70 5.21 5.03 -445.38 -2.24 2.97 16 11 C 0.56 0.22 7.74 86.79 0.67 0.89 16 12 O -0.57 -5.28 16.01 -3.87 -0.06 -5.34 16 13 C -0.14 0.24 5.87 -20.09 -0.12 0.12 16 14 C -0.04 0.27 9.28 22.54 0.21 0.48 16 15 C -0.10 0.49 6.22 22.28 0.14 0.63 16 16 Br -0.03 0.14 33.69 -20.37 -0.69 -0.55 16 17 C -0.06 0.29 8.40 22.34 0.19 0.48 16 18 C -0.12 0.30 5.34 -19.90 -0.11 0.19 16 19 C -0.07 0.18 2.80 71.24 0.20 0.38 16 20 O -0.55 0.63 12.83 -148.98 -1.91 -1.28 16 21 Si 0.77 -3.27 29.79 68.60 2.04 -1.23 16 22 C -0.03 -0.02 9.23 22.53 0.21 0.19 16 23 C -0.12 1.41 5.28 30.63 0.16 1.57 16 24 C -0.11 0.92 4.98 30.45 0.15 1.08 16 25 C 0.53 0.63 6.95 87.77 0.61 1.25 16 26 O -0.49 -3.39 17.86 -2.88 -0.05 -3.44 16 27 H 0.10 -0.10 7.45 -2.38 -0.02 -0.11 16 28 H 0.09 -0.30 8.14 -2.39 -0.02 -0.32 16 29 H 0.09 -0.25 8.14 -2.39 -0.02 -0.27 16 30 H 0.45 -4.53 7.70 -92.71 -0.71 -5.24 16 31 H 0.08 -0.31 8.14 -2.39 -0.02 -0.32 16 32 H 0.09 -0.30 8.14 -2.39 -0.02 -0.32 16 33 H 0.06 -0.09 8.14 -2.39 -0.02 -0.11 16 34 H 0.09 -0.86 7.33 -2.39 -0.02 -0.88 16 35 H 0.08 -0.19 7.58 -2.39 -0.02 -0.21 16 36 H 0.42 -5.68 6.64 -92.71 -0.62 -6.30 16 37 H 0.17 -2.08 6.40 -2.91 -0.02 -2.10 16 38 H 0.16 -1.26 4.89 -2.91 -0.01 -1.27 16 39 H 0.11 -0.11 7.96 -2.38 -0.02 -0.13 16 40 H 0.40 -3.83 8.70 -74.06 -0.64 -4.47 16 41 H -0.28 0.02 7.11 99.48 0.71 0.73 16 42 H -0.29 -1.06 7.11 99.48 0.71 -0.36 16 43 H 0.13 0.54 7.65 -2.91 -0.02 0.51 16 44 H 0.10 -1.32 8.14 -2.39 -0.02 -1.34 16 45 H 0.09 -1.50 7.33 -2.38 -0.02 -1.52 16 46 H 0.09 -0.70 8.14 -2.38 -0.02 -0.71 16 47 H 0.09 -0.81 8.14 -2.39 -0.02 -0.83 16 Total: 0.00 -27.39 404.93 -2.87 -30.26 By element: Atomic # 1 Polarization: -24.71 SS G_CDS: -0.86 Total: -25.57 kcal Atomic # 6 Polarization: 6.06 SS G_CDS: 5.68 Total: 11.74 kcal Atomic # 7 Polarization: 8.22 SS G_CDS: -6.95 Total: 1.27 kcal Atomic # 8 Polarization: -13.83 SS G_CDS: -2.09 Total: -15.92 kcal Atomic # 14 Polarization: -3.27 SS G_CDS: 2.04 Total: -1.23 kcal Atomic # 35 Polarization: 0.14 SS G_CDS: -0.69 Total: -0.55 kcal Total: -27.39 -2.87 -30.26 kcal The number of atoms in the molecule is 47 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17849352_12335870.mol2 47 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -41.353 kcal (2) G-P(sol) polarization free energy of solvation -27.390 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -68.744 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -2.865 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -30.256 kcal (6) G-S(sol) free energy of system = (1) + (5) -71.609 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.38 seconds