Wall clock time and date at job start Sun Mar 7 2021 15:06:25 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42905 * 1 3 3 C 1.35650 * 116.99762 * 2 1 4 4 C 1.40137 * 120.14732 * 179.97438 * 3 2 1 5 5 C 1.47527 * 120.19200 * 0.02562 * 4 3 2 6 6 O 1.21585 * 120.00274 * 359.97438 * 5 4 3 7 7 N 1.34782 * 119.99897 * 179.97438 * 5 4 3 8 8 C 1.46505 * 119.99899 * 180.02562 * 7 5 4 9 9 C 1.53006 * 109.45339 * 205.00264 * 8 7 5 10 10 C 1.53093 * 109.41514 * 179.57009 * 9 8 7 11 11 C 1.52472 * 109.51475 * 59.16745 * 10 9 8 12 12 C 1.52474 * 110.72922 * 301.23427 * 11 10 9 13 13 C 1.52997 * 109.45661 * 84.89977 * 8 7 5 14 14 N 1.46847 * 110.48837 * 63.98337 * 11 10 9 15 15 C 1.34668 * 106.42112 * 118.54997 * 14 11 10 16 16 O 1.21543 * 123.78851 * 180.02562 * 15 14 11 17 17 N 1.33873 * 112.42210 * 0.27168 * 15 14 11 18 18 C 1.46502 * 124.19491 * 179.69375 * 17 15 14 19 19 C 1.34918 * 111.60612 * 359.53839 * 17 15 14 20 20 O 1.21232 * 127.25172 * 180.17903 * 19 17 15 21 21 C 1.39713 * 119.61521 * 180.27439 * 4 3 2 22 22 C 1.37789 * 119.90462 * 359.51915 * 21 4 3 23 23 C 1.50706 * 119.84827 * 180.20884 * 22 21 4 24 24 O 1.42896 * 109.46940 * 65.27584 * 23 22 21 25 25 Si 1.86296 * 109.47207 * 185.28152 * 23 22 21 26 26 C 1.38544 * 120.30438 * 0.48765 * 22 21 4 27 27 C 1.38059 * 120.38742 * 359.74489 * 26 22 21 28 28 H 1.09003 * 109.47367 * 180.02562 * 1 2 3 29 29 H 1.09004 * 109.47009 * 299.99495 * 1 2 3 30 30 H 1.08997 * 109.47464 * 59.99539 * 1 2 3 31 31 H 0.96995 * 120.00027 * 0.02562 * 7 5 4 32 32 H 1.09002 * 109.43659 * 324.94953 * 8 7 5 33 33 H 1.08997 * 109.48323 * 59.58078 * 9 8 7 34 34 H 1.09009 * 109.47470 * 299.54655 * 9 8 7 35 35 H 1.09004 * 109.45598 * 299.15996 * 10 9 8 36 36 H 1.08997 * 109.46417 * 179.18503 * 10 9 8 37 37 H 1.08996 * 109.46541 * 178.77246 * 12 11 10 38 38 H 1.09001 * 109.46604 * 298.74907 * 12 11 10 39 39 H 1.09002 * 109.47538 * 300.40881 * 13 8 7 40 40 H 1.09002 * 109.47941 * 60.43696 * 13 8 7 41 41 H 0.97003 * 126.78593 * 298.55196 * 14 11 10 42 42 H 1.09005 * 109.47023 * 0.02562 * 18 17 15 43 43 H 1.08992 * 109.47295 * 120.02653 * 18 17 15 44 44 H 1.09002 * 109.46914 * 240.02887 * 18 17 15 45 45 H 1.07993 * 120.04512 * 179.72937 * 21 4 3 46 46 H 1.09005 * 109.46850 * 305.28082 * 23 22 21 47 47 H 0.96703 * 114.00148 * 60.00428 * 24 23 22 48 48 H 1.48505 * 110.00040 * 179.97438 * 25 23 22 49 49 H 1.48508 * 109.99811 * 301.31506 * 25 23 22 50 50 H 1.08001 * 119.80607 * 179.71913 * 26 22 21 51 51 H 1.08002 * 119.95221 * 180.02562 * 27 26 22 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0448 1.2087 0.0000 4 6 3.4441 1.2857 0.0005 5 6 4.2549 0.0532 0.0005 6 8 3.7095 -1.0334 0.0005 7 7 5.6005 0.1318 0.0005 8 6 6.4057 -1.0921 0.0000 9 6 7.7781 -0.7994 0.6099 10 6 8.6149 -2.0814 0.6187 11 6 8.7729 -2.5963 -0.8078 12 6 7.4112 -2.8725 -1.4357 13 6 6.5786 -1.5877 -1.4371 14 7 9.5283 -1.6346 -1.6207 15 6 10.6424 -2.2724 -2.0277 16 8 11.4973 -1.7618 -2.7246 17 7 10.7000 -3.5338 -1.5828 18 6 11.7952 -4.4613 -1.8768 19 6 9.6260 -3.8437 -0.8274 20 8 9.3922 -4.9014 -0.2831 21 6 4.0667 2.5364 0.0064 22 6 3.3037 3.6837 0.0015 23 6 3.9766 5.0321 0.0030 24 8 4.6991 5.2052 -1.2176 25 14 2.6884 6.3690 0.1571 26 6 1.9205 3.6033 0.0010 27 6 1.2924 2.3739 0.0001 28 1 -0.3634 -1.0277 0.0005 29 1 -0.3633 0.5138 0.8901 30 1 -0.3634 0.5139 -0.8899 31 1 6.0356 0.9987 0.0009 32 1 5.9021 -1.8579 0.5900 33 1 7.6529 -0.4400 1.6312 34 1 8.2849 -0.0386 0.0161 35 1 8.1149 -2.8372 1.2244 36 1 9.5980 -1.8705 1.0397 37 1 7.5472 -3.2182 -2.4604 38 1 6.8942 -3.6396 -0.8593 39 1 5.5998 -1.7893 -1.8723 40 1 7.0882 -0.8249 -2.0259 41 1 9.2750 -0.7206 -1.8242 42 1 12.5356 -3.9626 -2.5024 43 1 12.2621 -4.7794 -0.9447 44 1 11.4028 -5.3320 -2.4023 45 1 5.1445 2.6038 0.0112 46 1 4.6661 5.0931 0.8451 47 1 4.1475 5.1626 -2.0107 48 1 3.3393 7.7037 0.1605 49 1 1.7235 6.2767 -0.9680 50 1 1.3303 4.5078 0.0018 51 1 0.2137 2.3195 -0.0007 There are 72 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 72 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_17849352_12496546.mol2 51 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 15:06:25 Heat of formation + Delta-G solvation = -103.689436 kcal Electronic energy + Delta-G solvation = -37322.355185 eV Core-core repulsion = 32383.014385 eV Total energy + Delta-G solvation = -4939.340799 eV No. of doubly occupied orbitals = 72 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 390.172 amu Computer time = 1.38 seconds Orbital eigenvalues (eV) -43.78842 -41.82126 -40.53516 -39.68371 -39.29280 -38.99339 -37.31154 -36.89759 -35.88278 -34.09088 -32.66027 -32.28126 -31.93894 -30.18163 -28.87197 -28.55138 -26.28021 -25.70012 -24.72646 -24.29371 -23.54367 -22.49743 -21.74300 -21.37074 -21.02975 -19.58740 -19.02038 -18.52335 -18.18974 -17.89326 -17.77526 -17.32984 -16.93481 -16.82857 -16.62691 -16.51057 -16.28391 -16.15457 -15.98138 -15.94302 -15.64809 -15.46128 -15.16229 -14.93084 -14.62650 -14.60737 -14.42579 -14.32123 -13.86979 -13.66615 -13.61567 -13.60163 -13.49145 -13.39516 -13.21890 -13.08609 -12.54558 -12.49599 -12.30247 -12.14748 -12.01868 -11.86437 -11.78640 -11.73137 -11.17306 -10.92419 -10.85574 -10.58575 -10.54687 -10.28653 -10.07147 -9.34863 -5.07210 -0.30862 0.13425 0.53312 1.15563 1.16696 1.47355 1.80720 1.86661 1.95338 1.97388 2.03167 2.16702 2.66515 2.81200 3.20669 3.24051 3.27840 3.44151 3.52461 3.55270 3.61130 3.82329 3.87821 3.92183 3.94802 4.01912 4.04039 4.11105 4.15118 4.15769 4.26382 4.29938 4.33077 4.36437 4.44201 4.44545 4.52713 4.55831 4.59498 4.66145 4.67573 4.72588 4.78560 4.82303 4.84189 4.97754 5.04109 5.08089 5.17726 5.41029 5.44898 5.68073 5.95538 6.22698 6.28255 6.29778 6.47603 7.06235 7.27686 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.019 3.981 2 O -0.279 6.279 3 C 0.194 3.806 4 C -0.176 4.176 5 C 0.563 3.437 6 O -0.512 6.512 7 N -0.728 5.728 8 C 0.144 3.856 9 C -0.125 4.125 10 C -0.109 4.109 11 C 0.123 3.877 12 C -0.110 4.110 13 C -0.127 4.127 14 N -0.716 5.716 15 C 0.702 3.298 16 O -0.540 6.540 17 N -0.581 5.581 18 C 0.084 3.916 19 C 0.531 3.469 20 O -0.456 6.456 21 C -0.019 4.019 22 C -0.167 4.167 23 C -0.068 4.068 24 O -0.530 6.530 25 Si 0.683 3.317 26 C -0.048 4.048 27 C -0.214 4.214 28 H 0.105 0.895 29 H 0.059 0.941 30 H 0.058 0.942 31 H 0.398 0.602 32 H 0.097 0.903 33 H 0.085 0.915 34 H 0.072 0.928 35 H 0.096 0.904 36 H 0.082 0.918 37 H 0.079 0.921 38 H 0.095 0.905 39 H 0.083 0.917 40 H 0.067 0.933 41 H 0.439 0.561 42 H 0.098 0.902 43 H 0.079 0.921 44 H 0.079 0.921 45 H 0.135 0.865 46 H 0.119 0.881 47 H 0.377 0.623 48 H -0.256 1.256 49 H -0.260 1.260 50 H 0.134 0.866 51 H 0.141 0.859 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -3.985 3.688 2.817 6.117 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.076 4.076 2 O -0.189 6.189 3 C 0.145 3.855 4 C -0.180 4.180 5 C 0.351 3.649 6 O -0.388 6.388 7 N -0.381 5.381 8 C 0.040 3.960 9 C -0.163 4.163 10 C -0.148 4.148 11 C 0.032 3.968 12 C -0.149 4.149 13 C -0.166 4.166 14 N -0.381 5.381 15 C 0.403 3.597 16 O -0.413 6.413 17 N -0.328 5.328 18 C -0.057 4.057 19 C 0.317 3.683 20 O -0.325 6.325 21 C -0.038 4.038 22 C -0.167 4.167 23 C -0.178 4.178 24 O -0.336 6.336 25 Si 0.584 3.416 26 C -0.066 4.066 27 C -0.233 4.233 28 H 0.124 0.876 29 H 0.078 0.922 30 H 0.076 0.924 31 H 0.234 0.766 32 H 0.115 0.885 33 H 0.104 0.896 34 H 0.091 0.909 35 H 0.115 0.885 36 H 0.101 0.899 37 H 0.098 0.902 38 H 0.114 0.886 39 H 0.101 0.899 40 H 0.086 0.914 41 H 0.285 0.715 42 H 0.117 0.883 43 H 0.098 0.902 44 H 0.098 0.902 45 H 0.153 0.847 46 H 0.137 0.863 47 H 0.224 0.776 48 H -0.181 1.181 49 H -0.185 1.185 50 H 0.152 0.848 51 H 0.158 0.842 Dipole moment (debyes) X Y Z Total from point charges -3.757 3.025 2.773 5.564 hybrid contribution 0.143 0.695 -1.303 1.484 sum -3.614 3.719 1.470 5.390 Atomic orbital electron populations 1.23242 0.78138 1.04796 1.01466 1.86379 1.21233 1.25169 1.86130 1.19100 0.90962 0.85075 0.90391 1.19322 0.90878 0.93881 1.13888 1.17939 0.81806 0.88682 0.76496 1.90855 1.71446 1.28522 1.47942 1.45930 1.05899 1.09496 1.76783 1.21015 0.90881 0.87571 0.96553 1.21802 0.94238 0.97527 1.02703 1.21630 1.02068 0.98591 0.92536 1.21140 0.93750 0.87429 0.94498 1.21654 0.91573 0.99529 1.02172 1.21925 1.01123 0.96488 0.97027 1.45604 1.21623 1.16082 1.54777 1.15941 0.82942 0.80864 0.79983 1.91044 1.41405 1.68870 1.40012 1.46337 1.23626 1.14075 1.48723 1.21909 0.88279 0.92324 1.03147 1.20659 0.81316 0.89094 0.77239 1.90833 1.72908 1.25717 1.43001 1.20966 0.99814 0.89856 0.93149 1.20057 0.93533 0.95929 1.07210 1.24929 1.04034 0.98992 0.89892 1.86603 1.37419 1.94229 1.15385 0.95021 0.78822 0.77732 0.90005 1.21052 0.93821 0.97496 0.94233 1.21240 1.00768 0.91569 1.09694 0.87633 0.92214 0.92364 0.76632 0.88496 0.89645 0.90948 0.88544 0.89894 0.90187 0.88646 0.89884 0.91391 0.71531 0.88317 0.90236 0.90239 0.84737 0.86286 0.77565 1.18067 1.18489 0.84847 0.84155 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 -0.03 9.81 101.05 0.99 0.96 16 2 O -0.28 -0.72 8.57 -40.53 -0.35 -1.07 16 3 C 0.19 0.26 6.70 -38.70 -0.26 0.00 16 4 C -0.18 -0.16 5.89 -104.85 -0.62 -0.78 16 5 C 0.56 1.10 7.73 -12.47 -0.10 1.00 16 6 O -0.51 -2.93 14.82 -16.59 -0.25 -3.18 16 7 N -0.73 1.15 5.03 -54.84 -0.28 0.88 16 8 C 0.14 -0.29 2.44 -67.93 -0.17 -0.46 16 9 C -0.12 0.50 5.28 -26.68 -0.14 0.36 16 10 C -0.11 0.32 4.98 -26.95 -0.13 0.18 16 11 C 0.12 -0.19 0.84 -133.11 -0.11 -0.30 16 12 C -0.11 0.19 4.98 -26.95 -0.13 0.06 16 13 C -0.13 0.24 5.38 -26.68 -0.14 0.10 16 14 N -0.72 1.03 5.23 -53.88 -0.28 0.75 16 15 C 0.70 1.28 8.63 -87.82 -0.76 0.52 16 16 O -0.54 -2.92 17.24 5.33 0.09 -2.83 16 17 N -0.58 -0.61 3.01 -128.24 -0.39 -1.00 16 18 C 0.08 -0.05 10.89 59.85 0.65 0.60 16 19 C 0.53 0.56 6.95 -10.71 -0.07 0.48 16 20 O -0.46 -1.65 17.86 5.60 0.10 -1.55 16 21 C -0.02 0.03 9.16 -39.20 -0.36 -0.33 16 22 C -0.17 0.29 5.34 -104.67 -0.56 -0.27 16 23 C -0.07 0.15 2.79 36.01 0.10 0.25 16 24 O -0.53 0.41 12.83 -35.23 -0.45 -0.04 16 25 Si 0.68 -1.69 29.87 -169.99 -5.08 -6.76 16 26 C -0.05 0.09 8.65 -39.53 -0.34 -0.25 16 27 C -0.21 0.23 9.03 -39.47 -0.36 -0.13 16 28 H 0.11 -0.25 8.14 -51.93 -0.42 -0.67 16 29 H 0.06 -0.18 7.66 -51.93 -0.40 -0.58 16 30 H 0.06 -0.17 7.66 -51.93 -0.40 -0.56 16 31 H 0.40 -1.56 6.63 -40.82 -0.27 -1.83 16 32 H 0.10 -0.01 7.58 -51.93 -0.39 -0.40 16 33 H 0.08 -0.36 8.14 -51.93 -0.42 -0.79 16 34 H 0.07 -0.36 7.33 -51.92 -0.38 -0.74 16 35 H 0.10 -0.26 8.14 -51.93 -0.42 -0.68 16 36 H 0.08 -0.24 8.14 -51.93 -0.42 -0.66 16 37 H 0.08 -0.11 8.14 -51.93 -0.42 -0.53 16 38 H 0.10 -0.12 8.14 -51.93 -0.42 -0.55 16 39 H 0.08 0.02 8.14 -51.93 -0.42 -0.41 16 40 H 0.07 -0.20 7.33 -51.93 -0.38 -0.58 16 41 H 0.44 -1.39 7.70 -40.82 -0.31 -1.71 16 42 H 0.10 -0.05 7.45 -51.93 -0.39 -0.44 16 43 H 0.08 -0.12 8.14 -51.93 -0.42 -0.54 16 44 H 0.08 -0.11 8.14 -51.93 -0.42 -0.53 16 45 H 0.13 -0.45 6.40 -52.49 -0.34 -0.79 16 46 H 0.12 -0.38 7.96 -51.93 -0.41 -0.79 16 47 H 0.38 -1.23 8.70 45.56 0.40 -0.83 16 48 H -0.26 -0.29 7.11 56.52 0.40 0.11 16 49 H -0.26 0.16 7.00 56.52 0.40 0.55 16 50 H 0.13 -0.50 4.81 -52.49 -0.25 -0.75 16 51 H 0.14 -0.44 6.30 -52.49 -0.33 -0.77 16 LS Contribution 410.85 15.07 6.19 6.19 Total: 0.00 -12.01 410.85 -10.06 -22.06 By element: Atomic # 1 Polarization: -8.60 SS G_CDS: -6.87 Total: -15.46 kcal Atomic # 6 Polarization: 4.51 SS G_CDS: -2.51 Total: 2.00 kcal Atomic # 7 Polarization: 1.57 SS G_CDS: -0.94 Total: 0.63 kcal Atomic # 8 Polarization: -7.81 SS G_CDS: -0.85 Total: -8.66 kcal Atomic # 14 Polarization: -1.69 SS G_CDS: -5.08 Total: -6.76 kcal Total LS contribution 6.19 Total: 6.19 kcal Total: -12.01 -10.06 -22.06 kcal The number of atoms in the molecule is 51 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17849352_12496546.mol2 51 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -81.626 kcal (2) G-P(sol) polarization free energy of solvation -12.005 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -93.632 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.058 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.063 kcal (6) G-S(sol) free energy of system = (1) + (5) -103.689 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.38 seconds