Wall clock time and date at job start Sun Mar 7 2021 15:07:22 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46501 * 1 3 3 C 1.33875 * 124.19093 * 2 1 4 4 O 1.21532 * 123.78716 * 359.97438 * 3 2 1 5 5 N 1.34672 * 112.42064 * 180.02562 * 3 2 1 6 6 C 1.46856 * 106.41671 * 359.97438 * 5 3 2 7 7 C 1.52476 * 110.49282 * 241.44102 * 6 5 3 8 8 C 1.53092 * 109.52837 * 295.99985 * 7 6 5 9 9 C 1.52999 * 109.41375 * 300.83482 * 8 7 6 10 10 N 1.46498 * 109.45371 * 180.43274 * 9 8 7 11 11 C 1.34776 * 120.00205 * 84.90448 * 10 9 8 12 12 O 1.21507 * 120.00007 * 0.02562 * 11 10 9 13 13 C 1.48176 * 119.99950 * 180.02562 * 11 10 9 14 14 N 1.32714 * 119.72025 * 359.72200 * 13 11 10 15 15 C 1.31527 * 121.63601 * 179.74841 * 14 13 11 16 16 C 1.38552 * 120.90593 * 0.53374 * 15 14 13 17 17 C 1.50707 * 120.32527 * 179.71508 * 16 15 14 18 18 O 1.42898 * 109.46938 * 245.02327 * 17 16 15 19 19 Si 1.86305 * 109.46839 * 5.02332 * 17 16 15 20 20 C 1.38624 * 119.35357 * 359.74029 * 16 15 14 21 21 C 1.38595 * 118.48590 * 359.97438 * 20 16 15 22 22 C 1.53004 * 109.56453 * 60.40532 * 9 8 7 23 23 C 1.52480 * 110.48764 * 118.55801 * 6 5 3 24 24 C 1.34908 * 124.19856 * 180.02562 * 2 1 3 25 25 O 1.21240 * 127.25535 * 0.02562 * 24 2 1 26 26 H 1.09000 * 109.47461 * 359.97407 * 1 2 3 27 27 H 1.08999 * 109.46936 * 119.97700 * 1 2 3 28 28 H 1.08999 * 109.47142 * 239.97080 * 1 2 3 29 29 H 0.96996 * 126.79346 * 180.02562 * 5 3 2 30 30 H 1.09008 * 109.45754 * 56.01482 * 7 6 5 31 31 H 1.08998 * 109.46494 * 175.97552 * 7 6 5 32 32 H 1.08993 * 109.48076 * 180.85569 * 8 7 6 33 33 H 1.08997 * 109.47833 * 60.81242 * 8 7 6 34 34 H 1.09002 * 109.44261 * 300.38285 * 9 8 7 35 35 H 0.97007 * 119.99715 * 264.90429 * 10 9 8 36 36 H 1.08008 * 119.54756 * 180.26918 * 15 14 13 37 37 H 1.09004 * 109.46881 * 125.02437 * 17 16 15 38 38 H 0.96695 * 113.99921 * 60.00110 * 18 17 16 39 39 H 1.48501 * 109.99537 * 179.97438 * 19 17 16 40 40 H 1.48498 * 110.00069 * 301.31677 * 19 17 16 41 41 H 1.08000 * 120.75971 * 179.97438 * 20 16 15 42 42 H 1.07996 * 120.46818 * 180.02562 * 21 20 16 43 43 H 1.09000 * 109.47852 * 179.61204 * 22 9 8 44 44 H 1.08993 * 109.48323 * 59.57310 * 22 9 8 45 45 H 1.08998 * 109.46084 * 184.01493 * 23 6 5 46 46 H 1.08997 * 109.46144 * 303.98797 * 23 6 5 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 6 2.2173 1.1074 0.0000 4 8 1.7616 2.2340 -0.0005 5 7 3.5357 0.8327 -0.0006 6 6 3.6547 -0.6311 -0.0003 7 6 4.3791 -1.1076 1.2539 8 6 5.8148 -0.5762 1.2487 9 6 6.5389 -1.0797 -0.0015 10 7 7.9161 -0.5802 -0.0022 11 6 8.8757 -1.2486 0.6677 12 8 8.5987 -2.2658 1.2718 13 6 10.2685 -0.7430 0.6675 14 7 10.5660 0.3656 0.0012 15 6 11.7884 0.8505 -0.0204 16 6 12.8197 0.2106 0.6478 17 6 14.2169 0.7744 0.6091 18 8 15.0789 -0.1360 -0.0765 19 14 14.2024 2.4088 -0.2850 20 6 12.5541 -0.9535 1.3520 21 6 11.2557 -1.4382 1.3622 22 6 5.8136 -0.5764 -1.2513 23 6 4.3779 -1.1079 -1.2552 24 6 2.2233 -1.1158 -0.0005 25 8 1.8377 -2.2653 -0.0014 26 1 -0.3634 1.0276 0.0005 27 1 -0.3633 -0.5135 -0.8902 28 1 -0.3633 -0.5143 0.8897 29 1 4.2629 1.4746 -0.0003 30 1 3.8580 -0.7374 2.1369 31 1 4.3951 -2.1973 1.2722 32 1 6.3365 -0.9298 2.1380 33 1 5.7990 0.5136 1.2454 34 1 6.5481 -2.1697 -0.0013 35 1 8.1373 0.2317 -0.4848 36 1 11.9919 1.7577 -0.5701 37 1 14.5782 0.9202 1.6271 38 1 14.8172 -0.3130 -0.9904 39 1 15.5743 2.9755 -0.3295 40 1 13.6817 2.2288 -1.6640 41 1 13.3410 -1.4710 1.8806 42 1 11.0129 -2.3422 1.9008 43 1 6.3345 -0.9301 -2.1410 44 1 5.7978 0.5134 -1.2482 45 1 4.3941 -2.1976 -1.2730 46 1 3.8561 -0.7381 -2.1377 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_17849352_13287726.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 15:07:22 Heat of formation + Delta-G solvation = -60.494974 kcal Electronic energy + Delta-G solvation = -32285.484309 eV Core-core repulsion = 27756.810462 eV Total energy + Delta-G solvation = -4528.673847 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 361.152 amu Computer time = 1.09 seconds Orbital eigenvalues (eV) -43.81144 -41.96120 -40.69207 -39.72632 -39.15884 -38.11759 -36.95719 -35.99432 -34.34276 -33.57789 -33.02998 -32.32358 -30.39798 -28.92663 -27.77299 -25.31846 -25.07551 -24.34981 -24.08689 -23.21750 -21.86877 -21.60402 -21.18704 -19.39683 -18.98040 -18.79209 -18.02481 -17.91744 -17.63900 -17.07161 -16.79579 -16.64572 -16.57594 -16.52288 -16.27481 -16.17643 -15.77679 -15.66772 -15.22444 -15.17029 -14.71206 -14.59028 -14.48362 -14.33455 -14.29108 -13.84438 -13.62293 -13.59172 -13.57477 -13.48986 -13.16546 -12.76950 -12.57247 -12.19849 -12.07932 -11.89139 -11.82817 -11.41561 -11.16415 -11.12473 -10.87372 -10.83928 -10.70708 -10.57749 -10.43028 -10.16700 -5.15332 -0.64898 -0.01721 0.51210 1.03450 1.13660 1.39418 1.54945 1.79162 1.84641 1.93638 1.97411 2.61647 2.75220 2.87991 3.11904 3.17702 3.24221 3.35543 3.50962 3.55879 3.64225 3.77944 3.83540 3.89213 3.92562 3.98532 4.05491 4.07778 4.26505 4.28567 4.28811 4.32484 4.41910 4.46389 4.53271 4.61611 4.64846 4.69509 4.74931 4.76981 4.79993 4.88851 4.95217 5.01381 5.26915 5.32082 5.66391 5.93688 6.15088 6.23005 6.27734 6.53747 7.04207 7.04527 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.084 3.916 2 N -0.581 5.581 3 C 0.702 3.298 4 O -0.540 6.540 5 N -0.716 5.716 6 C 0.122 3.878 7 C -0.110 4.110 8 C -0.127 4.127 9 C 0.140 3.860 10 N -0.708 5.708 11 C 0.575 3.425 12 O -0.525 6.525 13 C 0.080 3.920 14 N -0.453 5.453 15 C 0.102 3.898 16 C -0.147 4.147 17 C -0.074 4.074 18 O -0.525 6.525 19 Si 0.687 3.313 20 C -0.052 4.052 21 C -0.108 4.108 22 C -0.124 4.124 23 C -0.109 4.109 24 C 0.531 3.469 25 O -0.457 6.457 26 H 0.098 0.902 27 H 0.079 0.921 28 H 0.079 0.921 29 H 0.440 0.560 30 H 0.081 0.919 31 H 0.095 0.905 32 H 0.083 0.917 33 H 0.070 0.930 34 H 0.098 0.902 35 H 0.412 0.588 36 H 0.165 0.835 37 H 0.125 0.875 38 H 0.378 0.622 39 H -0.251 1.251 40 H -0.255 1.255 41 H 0.148 0.852 42 H 0.153 0.847 43 H 0.085 0.915 44 H 0.074 0.926 45 H 0.096 0.904 46 H 0.083 0.917 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.532 2.346 -0.756 3.534 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.057 4.057 2 N -0.327 5.327 3 C 0.403 3.597 4 O -0.413 6.413 5 N -0.381 5.381 6 C 0.032 3.968 7 C -0.149 4.149 8 C -0.166 4.166 9 C 0.036 3.964 10 N -0.359 5.359 11 C 0.359 3.641 12 O -0.400 6.400 13 C -0.058 4.058 14 N -0.164 5.164 15 C -0.058 4.058 16 C -0.150 4.150 17 C -0.184 4.184 18 O -0.332 6.332 19 Si 0.587 3.413 20 C -0.078 4.078 21 C -0.129 4.129 22 C -0.162 4.162 23 C -0.148 4.148 24 C 0.317 3.683 25 O -0.325 6.325 26 H 0.117 0.883 27 H 0.098 0.902 28 H 0.098 0.902 29 H 0.285 0.715 30 H 0.099 0.901 31 H 0.114 0.886 32 H 0.101 0.899 33 H 0.088 0.912 34 H 0.116 0.884 35 H 0.249 0.751 36 H 0.181 0.819 37 H 0.143 0.857 38 H 0.226 0.774 39 H -0.176 1.176 40 H -0.179 1.179 41 H 0.165 0.835 42 H 0.170 0.830 43 H 0.104 0.896 44 H 0.092 0.908 45 H 0.115 0.885 46 H 0.102 0.898 Dipole moment (debyes) X Y Z Total from point charges 1.630 2.435 -0.886 3.062 hybrid contribution 1.278 -0.671 -0.426 1.505 sum 2.909 1.764 -1.312 3.646 Atomic orbital electron populations 1.21911 0.74687 1.05345 1.03726 1.46334 1.09810 1.07973 1.68629 1.15938 0.82229 0.84156 0.77399 1.91043 1.75179 1.20288 1.54759 1.45606 1.06502 1.07080 1.78911 1.21141 0.94165 0.81758 0.99784 1.21656 0.95419 1.03019 0.94846 1.21924 0.94238 1.01261 0.99154 1.21117 0.80018 1.00699 0.94609 1.45850 1.07910 1.29432 1.52687 1.17850 0.83811 0.83329 0.79085 1.90828 1.81929 1.24056 1.43237 1.21162 0.94662 0.93012 0.97010 1.67526 1.21688 1.10878 1.16301 1.22678 0.87518 0.98917 0.96663 1.21589 0.97660 0.97097 0.98646 1.25023 0.86999 1.02387 1.04041 1.86644 1.52485 1.64292 1.29741 0.94984 0.84855 0.79310 0.82172 1.21578 0.96519 0.94159 0.95576 1.22234 0.92398 1.00661 0.97564 1.21792 0.94651 1.01666 0.98120 1.21635 0.95055 1.03044 0.95102 1.20649 0.88094 0.84920 0.74647 1.90836 1.78979 1.17656 1.44998 0.88300 0.90232 0.90230 0.71498 0.90076 0.88624 0.89860 0.91178 0.88415 0.75149 0.81868 0.85705 0.77426 1.17567 1.17947 0.83455 0.82953 0.89614 0.90752 0.88546 0.89827 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.08 -0.07 10.89 59.85 0.65 0.58 16 2 N -0.58 -0.40 3.01 -128.25 -0.39 -0.78 16 3 C 0.70 1.00 8.63 -87.82 -0.76 0.24 16 4 O -0.54 -2.72 17.24 5.34 0.09 -2.62 16 5 N -0.72 1.35 5.23 -53.87 -0.28 1.07 16 6 C 0.12 -0.25 0.84 -133.10 -0.11 -0.36 16 7 C -0.11 0.26 4.98 -26.95 -0.13 0.13 16 8 C -0.13 0.34 5.38 -26.68 -0.14 0.19 16 9 C 0.14 -0.36 2.44 -67.93 -0.17 -0.52 16 10 N -0.71 1.18 5.07 -54.64 -0.28 0.91 16 11 C 0.57 0.63 7.78 -12.18 -0.09 0.53 16 12 O -0.53 -2.07 15.99 5.36 0.09 -1.99 16 13 C 0.08 0.04 6.75 -83.01 -0.56 -0.52 16 14 N -0.45 0.18 9.54 -9.80 -0.09 0.08 16 15 C 0.10 -0.18 9.84 -17.57 -0.17 -0.35 16 16 C -0.15 0.29 5.37 -104.36 -0.56 -0.27 16 17 C -0.07 0.19 2.82 36.01 0.10 0.30 16 18 O -0.53 0.49 12.84 -35.23 -0.45 0.04 16 19 Si 0.69 -2.19 29.91 -169.99 -5.08 -7.27 16 20 C -0.05 0.08 9.83 -39.31 -0.39 -0.31 16 21 C -0.11 0.02 9.63 -39.05 -0.38 -0.35 16 22 C -0.12 0.53 5.28 -26.68 -0.14 0.39 16 23 C -0.11 0.36 4.98 -26.95 -0.13 0.23 16 24 C 0.53 0.34 6.95 -10.72 -0.07 0.27 16 25 O -0.46 -1.48 17.86 5.59 0.10 -1.38 16 26 H 0.10 -0.08 7.45 -51.93 -0.39 -0.47 16 27 H 0.08 -0.14 8.14 -51.93 -0.42 -0.56 16 28 H 0.08 -0.13 8.14 -51.93 -0.42 -0.56 16 29 H 0.44 -1.60 7.71 -40.82 -0.31 -1.91 16 30 H 0.08 -0.16 8.14 -51.92 -0.42 -0.59 16 31 H 0.10 -0.19 8.14 -51.93 -0.42 -0.61 16 32 H 0.08 -0.07 8.14 -51.93 -0.42 -0.50 16 33 H 0.07 -0.25 7.33 -51.93 -0.38 -0.63 16 34 H 0.10 -0.09 7.58 -51.93 -0.39 -0.49 16 35 H 0.41 -1.23 7.93 -40.82 -0.32 -1.55 16 36 H 0.16 -0.63 4.86 -52.48 -0.25 -0.88 16 37 H 0.13 -0.43 7.96 -51.93 -0.41 -0.85 16 38 H 0.38 -1.39 8.70 45.56 0.40 -0.99 16 39 H -0.25 -0.10 7.11 56.52 0.40 0.30 16 40 H -0.25 0.38 7.01 56.52 0.40 0.78 16 41 H 0.15 -0.40 8.06 -52.49 -0.42 -0.82 16 42 H 0.15 -0.07 7.64 -52.49 -0.40 -0.48 16 43 H 0.09 -0.37 8.14 -51.93 -0.42 -0.79 16 44 H 0.07 -0.39 7.33 -51.93 -0.38 -0.77 16 45 H 0.10 -0.30 8.14 -51.93 -0.42 -0.72 16 46 H 0.08 -0.27 8.14 -51.93 -0.42 -0.69 16 LS Contribution 380.86 15.07 5.74 5.74 Total: 0.00 -10.35 380.86 -9.48 -19.82 By element: Atomic # 1 Polarization: -7.91 SS G_CDS: -5.86 Total: -13.77 kcal Atomic # 6 Polarization: 3.22 SS G_CDS: -3.06 Total: 0.16 kcal Atomic # 7 Polarization: 2.31 SS G_CDS: -1.04 Total: 1.28 kcal Atomic # 8 Polarization: -5.78 SS G_CDS: -0.17 Total: -5.95 kcal Atomic # 14 Polarization: -2.19 SS G_CDS: -5.08 Total: -7.27 kcal Total LS contribution 5.74 Total: 5.74 kcal Total: -10.35 -9.48 -19.82 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17849352_13287726.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -40.671 kcal (2) G-P(sol) polarization free energy of solvation -10.347 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -51.017 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.478 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.824 kcal (6) G-S(sol) free energy of system = (1) + (5) -60.495 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.10 seconds