Wall clock time and date at job start Sun Mar 7 2021 15:07:53 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46502 * 1 3 3 C 1.33873 * 124.19491 * 2 1 4 4 O 1.21543 * 123.78882 * 359.96089 * 3 2 1 5 5 N 1.34668 * 112.42210 * 179.69375 * 3 2 1 6 6 C 1.46847 * 106.42112 * 0.27168 * 5 3 2 7 7 C 1.52474 * 110.49025 * 241.43843 * 6 5 3 8 8 C 1.53095 * 109.51486 * 296.01556 * 7 6 5 9 9 C 1.52997 * 109.41704 * 300.83442 * 8 7 6 10 10 N 1.46505 * 109.45661 * 180.42687 * 9 8 7 11 11 C 1.34782 * 119.99899 * 84.89977 * 10 9 8 12 12 O 1.21585 * 119.99829 * 359.97438 * 11 10 9 13 13 C 1.47527 * 119.99897 * 180.02562 * 11 10 9 14 14 C 1.40137 * 120.19200 * 179.97438 * 13 11 10 15 15 O 1.35650 * 120.14732 * 0.02562 * 14 13 11 16 16 C 1.38707 * 119.70192 * 179.97438 * 14 13 11 17 17 C 1.38054 * 120.08494 * 0.03373 * 16 14 13 18 18 C 1.50697 * 119.80619 * 179.97438 * 17 16 14 19 19 O 1.42897 * 109.47333 * 64.99473 * 18 17 16 20 20 Si 1.86303 * 109.47321 * 184.99512 * 18 17 16 21 21 C 1.38557 * 120.38980 * 359.96820 * 17 16 14 22 22 C 1.37787 * 120.29774 * 359.74729 * 21 17 16 23 23 C 1.53006 * 109.57143 * 60.39626 * 9 8 7 24 24 C 1.52472 * 110.48837 * 118.54997 * 6 5 3 25 25 C 1.34918 * 124.19877 * 180.17464 * 2 1 3 26 26 O 1.21232 * 127.25172 * 0.02562 * 25 2 1 27 27 H 1.09005 * 109.47023 * 0.02562 * 1 2 3 28 28 H 1.08992 * 109.47295 * 120.02653 * 1 2 3 29 29 H 1.09002 * 109.46914 * 240.02887 * 1 2 3 30 30 H 0.97003 * 126.79295 * 180.26969 * 5 3 2 31 31 H 1.08996 * 109.46541 * 56.02444 * 7 6 5 32 32 H 1.09001 * 109.46604 * 176.00106 * 7 6 5 33 33 H 1.09002 * 109.48147 * 180.85622 * 8 7 6 34 34 H 1.09002 * 109.48597 * 60.82031 * 8 7 6 35 35 H 1.09002 * 109.45518 * 300.36572 * 9 8 7 36 36 H 0.96995 * 120.00073 * 264.89888 * 10 9 8 37 37 H 0.96700 * 114.00725 * 90.00090 * 15 14 13 38 38 H 1.08002 * 119.96313 * 179.97438 * 16 14 13 39 39 H 1.09001 * 109.47321 * 304.99324 * 18 17 16 40 40 H 0.96703 * 114.00200 * 60.00401 * 19 18 17 41 41 H 1.48501 * 110.00405 * 179.97438 * 20 18 17 42 42 H 1.48496 * 109.99977 * 301.31869 * 20 18 17 43 43 H 1.07994 * 119.84439 * 180.02562 * 21 17 16 44 44 H 1.07993 * 120.04612 * 180.27641 * 22 21 17 45 45 H 1.08997 * 109.48323 * 179.61336 * 23 9 8 46 46 H 1.09009 * 109.47470 * 59.57912 * 23 9 8 47 47 H 1.09004 * 109.46319 * 183.98645 * 24 6 5 48 48 H 1.08997 * 109.46734 * 303.96772 * 24 6 5 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 6 2.2174 1.1073 0.0000 4 8 1.7618 2.2341 -0.0007 5 7 3.5357 0.8325 0.0067 6 6 3.6548 -0.6311 0.0049 7 6 4.3719 -1.1098 1.2625 8 6 5.8074 -0.5778 1.2664 9 6 6.5389 -1.0787 0.0194 10 7 7.9159 -0.5784 0.0275 11 6 8.8720 -1.2476 0.7018 12 8 8.5916 -2.2661 1.3037 13 6 10.2585 -0.7436 0.7104 14 6 11.2557 -1.4359 1.4105 15 8 10.9508 -2.5735 2.0836 16 6 12.5560 -0.9531 1.4113 17 6 12.8649 0.2046 0.7256 18 6 14.2796 0.7237 0.7312 19 8 15.1314 -0.2075 0.0609 20 14 14.3421 2.3657 -0.1467 21 6 11.8818 0.8919 0.0322 22 6 10.5861 0.4236 0.0158 23 6 5.8206 -0.5736 -1.2336 24 6 4.3851 -1.1056 -1.2466 25 6 2.2234 -1.1159 -0.0034 26 8 1.8377 -2.2652 -0.0073 27 1 -0.3633 1.0277 -0.0005 28 1 -0.3633 -0.5142 -0.8897 29 1 -0.3633 -0.5134 0.8903 30 1 4.2630 1.4745 0.0116 31 1 3.8457 -0.7414 2.1431 32 1 4.3883 -2.1995 1.2787 33 1 6.3242 -0.9329 2.1581 34 1 5.7913 0.5121 1.2652 35 1 6.5489 -2.1686 0.0177 36 1 8.1394 0.2343 -0.4524 37 1 11.0400 -3.3788 1.5558 38 1 13.3278 -1.4831 1.9499 39 1 14.6167 0.8488 1.7602 40 1 14.8900 -0.3678 -0.8617 41 1 15.7320 2.8887 -0.1476 42 1 13.8549 2.2149 -1.5413 43 1 12.1333 1.7964 -0.5016 44 1 9.8240 0.9601 -0.5296 45 1 6.3468 -0.9255 -2.1209 46 1 5.8043 0.5163 -1.2287 47 1 4.4019 -2.1954 -1.2660 48 1 3.8682 -0.7345 -2.1315 There are 69 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 69 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_17849352_13422076.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 15:07:53 Heat of formation + Delta-G solvation = -110.581861 kcal Electronic energy + Delta-G solvation = -34767.734447 eV Core-core repulsion = 29983.632389 eV Total energy + Delta-G solvation = -4784.102058 eV No. of doubly occupied orbitals = 69 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 376.156 amu Computer time = 1.24 seconds Orbital eigenvalues (eV) -43.83203 -41.75386 -40.46862 -39.72245 -39.13729 -38.45126 -37.28575 -36.93706 -35.93558 -34.18448 -32.79172 -32.34465 -31.18608 -30.29172 -28.89485 -27.50433 -25.22052 -24.37985 -24.02266 -23.93264 -23.02949 -21.80768 -21.48886 -21.19142 -19.56012 -19.08774 -18.74822 -18.36135 -17.93591 -17.81939 -17.47455 -16.82679 -16.65092 -16.59262 -16.52837 -16.34240 -16.18292 -15.95672 -15.70785 -15.56842 -15.30363 -15.19452 -15.00389 -14.62752 -14.46927 -14.33185 -13.88882 -13.82068 -13.64861 -13.62885 -13.53256 -13.27472 -13.16711 -13.05658 -12.60303 -12.46203 -12.16149 -12.08652 -11.90681 -11.84656 -11.67495 -11.20808 -10.91492 -10.89042 -10.69829 -10.59731 -10.28987 -10.13278 -9.87260 -5.09918 -0.48726 0.02972 0.49392 1.10471 1.11625 1.44117 1.68257 1.83335 1.88270 1.91607 1.95714 2.50017 2.76263 3.01141 3.15061 3.21208 3.23489 3.34881 3.48393 3.52508 3.64451 3.75799 3.83514 3.90403 3.91936 3.97722 4.04692 4.12534 4.24883 4.27225 4.29069 4.29867 4.39964 4.49444 4.52575 4.60677 4.61076 4.62064 4.68369 4.72044 4.78659 4.88330 4.91622 4.99986 5.05969 5.12670 5.30241 5.45415 5.63635 5.91631 6.22824 6.25915 6.32609 6.64256 7.02227 7.12051 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.084 3.916 2 N -0.581 5.581 3 C 0.702 3.298 4 O -0.540 6.540 5 N -0.716 5.716 6 C 0.123 3.877 7 C -0.111 4.111 8 C -0.127 4.127 9 C 0.143 3.857 10 N -0.726 5.726 11 C 0.560 3.440 12 O -0.514 6.514 13 C -0.165 4.165 14 C 0.173 3.827 15 O -0.476 6.476 16 C -0.129 4.129 17 C -0.073 4.073 18 C -0.081 4.081 19 O -0.526 6.526 20 Si 0.691 3.309 21 C -0.137 4.137 22 C -0.065 4.065 23 C -0.124 4.124 24 C -0.109 4.109 25 C 0.531 3.469 26 O -0.456 6.456 27 H 0.098 0.902 28 H 0.079 0.921 29 H 0.079 0.921 30 H 0.439 0.561 31 H 0.080 0.920 32 H 0.095 0.905 33 H 0.083 0.917 34 H 0.068 0.932 35 H 0.097 0.903 36 H 0.399 0.601 37 H 0.398 0.602 38 H 0.140 0.860 39 H 0.123 0.877 40 H 0.377 0.623 41 H -0.255 1.255 42 H -0.258 1.258 43 H 0.136 0.864 44 H 0.134 0.866 45 H 0.084 0.916 46 H 0.072 0.928 47 H 0.096 0.904 48 H 0.083 0.917 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.672 2.896 -3.375 4.751 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.057 4.057 2 N -0.327 5.327 3 C 0.403 3.597 4 O -0.413 6.413 5 N -0.381 5.381 6 C 0.032 3.968 7 C -0.150 4.150 8 C -0.166 4.166 9 C 0.039 3.961 10 N -0.379 5.379 11 C 0.348 3.652 12 O -0.389 6.389 13 C -0.169 4.169 14 C 0.127 3.873 15 O -0.287 6.287 16 C -0.147 4.147 17 C -0.074 4.074 18 C -0.191 4.191 19 O -0.332 6.332 20 Si 0.592 3.408 21 C -0.155 4.155 22 C -0.084 4.084 23 C -0.162 4.162 24 C -0.148 4.148 25 C 0.317 3.683 26 O -0.324 6.324 27 H 0.117 0.883 28 H 0.098 0.902 29 H 0.098 0.902 30 H 0.284 0.716 31 H 0.099 0.901 32 H 0.114 0.886 33 H 0.102 0.898 34 H 0.087 0.913 35 H 0.115 0.885 36 H 0.234 0.766 37 H 0.257 0.743 38 H 0.158 0.842 39 H 0.141 0.859 40 H 0.225 0.775 41 H -0.180 1.180 42 H -0.183 1.183 43 H 0.154 0.846 44 H 0.151 0.849 45 H 0.103 0.897 46 H 0.091 0.909 47 H 0.114 0.886 48 H 0.101 0.899 Dipole moment (debyes) X Y Z Total from point charges 1.384 2.906 -2.559 4.112 hybrid contribution 0.591 -0.540 -1.237 1.474 sum 1.975 2.365 -3.796 4.889 Atomic orbital electron populations 1.21914 0.74668 1.05353 1.03740 1.46336 1.09819 1.07966 1.68626 1.15939 0.82225 0.84163 0.77391 1.91046 1.75188 1.20280 1.54765 1.45595 1.06495 1.07078 1.78941 1.21136 0.94171 0.81731 0.99778 1.21656 0.95530 1.03009 0.94763 1.21925 0.94175 1.01114 0.99364 1.21044 0.80033 1.00669 0.94365 1.45947 1.08569 1.29343 1.54028 1.18041 0.84490 0.83777 0.78918 1.90848 1.82211 1.23813 1.42068 1.20409 0.94274 0.99168 1.03027 1.18508 0.90407 0.88805 0.89607 1.84758 1.90251 1.14678 1.39049 1.21364 0.95606 0.97390 1.00362 1.20386 0.96104 0.94826 0.96091 1.25160 0.87404 1.02425 1.04120 1.86641 1.54752 1.62846 1.28991 0.94864 0.84281 0.79784 0.81902 1.21002 0.92960 1.00489 1.01050 1.21132 0.96617 0.94120 0.96506 1.21800 0.94802 1.01499 0.98148 1.21629 0.94996 1.03073 0.95147 1.20653 0.88096 0.84923 0.74660 1.90836 1.78965 1.17664 1.44958 0.88295 0.90228 0.90212 0.71556 0.90101 0.88646 0.89808 0.91318 0.88493 0.76573 0.74317 0.84184 0.85913 0.77539 1.17984 1.18295 0.84646 0.84872 0.89696 0.90901 0.88551 0.89863 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.08 -0.08 10.89 59.85 0.65 0.57 16 2 N -0.58 -0.31 3.01 -128.24 -0.39 -0.70 16 3 C 0.70 0.85 8.63 -87.82 -0.76 0.10 16 4 O -0.54 -2.60 17.24 5.33 0.09 -2.51 16 5 N -0.72 1.56 5.23 -53.88 -0.28 1.28 16 6 C 0.12 -0.27 0.84 -133.11 -0.11 -0.39 16 7 C -0.11 0.26 4.98 -26.95 -0.13 0.13 16 8 C -0.13 0.35 5.38 -26.68 -0.14 0.21 16 9 C 0.14 -0.44 2.44 -67.93 -0.17 -0.61 16 10 N -0.73 2.15 5.03 -54.84 -0.28 1.87 16 11 C 0.56 0.30 7.73 -12.47 -0.10 0.20 16 12 O -0.51 -2.16 14.82 -16.59 -0.25 -2.40 16 13 C -0.17 0.06 5.89 -104.85 -0.62 -0.56 16 14 C 0.17 0.13 6.72 -38.70 -0.26 -0.13 16 15 O -0.48 -0.85 11.58 -40.53 -0.47 -1.32 16 16 C -0.13 0.04 9.60 -39.48 -0.38 -0.34 16 17 C -0.07 0.12 5.36 -104.57 -0.56 -0.44 16 18 C -0.08 0.16 2.79 36.00 0.10 0.26 16 19 O -0.53 0.19 12.83 -35.23 -0.45 -0.27 16 20 Si 0.69 -1.90 29.86 -169.99 -5.08 -6.98 16 21 C -0.14 0.39 8.64 -39.63 -0.34 0.05 16 22 C -0.07 0.19 9.54 -39.20 -0.37 -0.18 16 23 C -0.12 0.62 5.28 -26.68 -0.14 0.48 16 24 C -0.11 0.40 4.98 -26.95 -0.13 0.27 16 25 C 0.53 0.28 6.95 -10.71 -0.07 0.20 16 26 O -0.46 -1.44 17.86 5.60 0.10 -1.34 16 27 H 0.10 -0.09 7.45 -51.93 -0.39 -0.48 16 28 H 0.08 -0.15 8.14 -51.93 -0.42 -0.57 16 29 H 0.08 -0.14 8.14 -51.93 -0.42 -0.56 16 30 H 0.44 -1.78 7.70 -40.82 -0.31 -2.10 16 31 H 0.08 -0.15 8.14 -51.93 -0.42 -0.58 16 32 H 0.10 -0.18 8.14 -51.93 -0.42 -0.60 16 33 H 0.08 -0.04 8.14 -51.93 -0.42 -0.46 16 34 H 0.07 -0.26 7.33 -51.93 -0.38 -0.64 16 35 H 0.10 -0.11 7.58 -51.93 -0.39 -0.51 16 36 H 0.40 -2.24 6.63 -40.82 -0.27 -2.51 16 37 H 0.40 -0.70 9.06 45.56 0.41 -0.29 16 38 H 0.14 -0.06 8.06 -52.49 -0.42 -0.48 16 39 H 0.12 -0.29 7.96 -51.93 -0.41 -0.71 16 40 H 0.38 -1.26 8.70 45.56 0.40 -0.86 16 41 H -0.25 -0.24 7.11 56.52 0.40 0.16 16 42 H -0.26 0.33 7.00 56.52 0.40 0.73 16 43 H 0.14 -0.64 4.81 -52.49 -0.25 -0.89 16 44 H 0.13 -0.81 6.40 -52.49 -0.34 -1.15 16 45 H 0.08 -0.45 8.14 -51.93 -0.42 -0.87 16 46 H 0.07 -0.45 7.33 -51.92 -0.38 -0.83 16 47 H 0.10 -0.32 8.14 -51.93 -0.42 -0.75 16 48 H 0.08 -0.30 8.14 -51.93 -0.42 -0.72 16 LS Contribution 392.35 15.07 5.91 5.91 Total: 0.00 -12.37 392.35 -9.95 -22.32 By element: Atomic # 1 Polarization: -10.35 SS G_CDS: -5.33 Total: -15.68 kcal Atomic # 6 Polarization: 3.36 SS G_CDS: -3.54 Total: -0.18 kcal Atomic # 7 Polarization: 3.39 SS G_CDS: -0.94 Total: 2.45 kcal Atomic # 8 Polarization: -6.87 SS G_CDS: -0.98 Total: -7.85 kcal Atomic # 14 Polarization: -1.90 SS G_CDS: -5.08 Total: -6.98 kcal Total LS contribution 5.91 Total: 5.91 kcal Total: -12.37 -9.95 -22.32 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17849352_13422076.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -88.259 kcal (2) G-P(sol) polarization free energy of solvation -12.374 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -100.633 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.949 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.323 kcal (6) G-S(sol) free energy of system = (1) + (5) -110.582 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.24 seconds