Wall clock time and date at job start Sun Mar 7 2021 15:08:27 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46495 * 1 3 3 C 1.33866 * 124.19821 * 2 1 4 4 O 1.21543 * 123.78718 * 359.97438 * 3 2 1 5 5 N 1.34667 * 112.42521 * 179.97438 * 3 2 1 6 6 C 1.46862 * 106.42388 * 0.02562 * 5 3 2 7 7 C 1.52471 * 110.48127 * 118.54202 * 6 5 3 8 8 C 1.53081 * 109.58972 * 181.30483 * 7 6 5 9 9 C 1.53010 * 109.41741 * 300.84823 * 8 7 6 10 10 N 1.46497 * 109.46712 * 180.49697 * 9 8 7 11 11 C 1.34775 * 120.00292 * 155.00067 * 10 9 8 12 12 O 1.21286 * 119.99711 * 359.97438 * 11 10 9 13 13 C 1.50699 * 120.00269 * 179.97438 * 11 10 9 14 14 C 1.50701 * 109.47350 * 180.02562 * 13 11 10 15 15 C 1.34849 * 125.88953 * 274.95684 * 14 13 11 16 16 C 1.40895 * 107.41486 * 179.79987 * 15 14 13 17 17 C 1.34851 * 107.41829 * 0.38657 * 16 15 14 18 18 C 1.50699 * 125.89054 * 179.88330 * 17 16 15 19 19 O 1.42894 * 109.47188 * 244.68202 * 18 17 16 20 20 Si 1.86298 * 109.46950 * 4.68876 * 18 17 16 21 21 N 1.36338 * 125.89105 * 94.99589 * 14 13 11 22 22 C 1.53013 * 109.49500 * 60.48710 * 9 8 7 23 23 C 1.52472 * 110.47937 * 241.44258 * 6 5 3 24 24 C 1.34920 * 124.19718 * 180.02562 * 2 1 3 25 25 O 1.21237 * 127.25018 * 359.97438 * 24 2 1 26 26 H 1.08998 * 109.47022 * 359.97075 * 1 2 3 27 27 H 1.09000 * 109.47240 * 119.97533 * 1 2 3 28 28 H 1.09000 * 109.46956 * 239.97466 * 1 2 3 29 29 H 0.97005 * 126.79195 * 180.02562 * 5 3 2 30 30 H 1.08999 * 109.45412 * 61.26230 * 7 6 5 31 31 H 1.09008 * 109.44613 * 301.33779 * 7 6 5 32 32 H 1.09002 * 109.47518 * 180.86460 * 8 7 6 33 33 H 1.08991 * 109.48330 * 60.83468 * 8 7 6 34 34 H 1.09003 * 109.46533 * 300.48275 * 9 8 7 35 35 H 0.97005 * 120.00086 * 334.99912 * 10 9 8 36 36 H 1.08992 * 109.47219 * 59.99936 * 13 11 10 37 37 H 1.08999 * 109.46957 * 299.99971 * 13 11 10 38 38 H 1.08001 * 126.29324 * 0.05728 * 15 14 13 39 39 H 1.08001 * 126.28894 * 180.23430 * 16 15 14 40 40 H 1.09006 * 109.46662 * 124.68471 * 18 17 16 41 41 H 0.96709 * 113.99337 * 60.00344 * 19 18 17 42 42 H 1.48506 * 109.99834 * 180.02562 * 20 18 17 43 43 H 1.48502 * 110.00011 * 301.31529 * 20 18 17 44 44 H 0.97006 * 125.63572 * 359.97438 * 21 14 13 45 45 H 1.08999 * 109.48013 * 59.50474 * 22 9 8 46 46 H 1.09009 * 109.47575 * 179.53216 * 22 9 8 47 47 H 1.09003 * 109.45370 * 298.73066 * 23 6 5 48 48 H 1.09002 * 109.45275 * 58.66671 * 23 6 5 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4649 0.0000 0.0000 3 6 2.2174 1.1072 0.0000 4 8 1.7618 2.2340 -0.0005 5 7 3.5357 0.8324 0.0006 6 6 3.6548 -0.6313 0.0003 7 6 4.3788 -1.1075 -1.2542 8 6 4.4629 -2.6360 -1.2493 9 6 5.2139 -3.1002 0.0004 10 7 5.3053 -4.5623 0.0002 11 6 6.3012 -5.1754 0.6700 12 8 7.1221 -4.5165 1.2727 13 6 6.3949 -6.6795 0.6703 14 6 7.5871 -7.1084 1.4862 15 6 8.8565 -7.2043 1.0412 16 6 9.6512 -7.6330 2.1227 17 6 8.8359 -7.7910 3.1851 18 6 9.2547 -8.2414 4.5609 19 8 8.6481 -9.5013 4.8549 20 14 11.1086 -8.4156 4.6197 21 7 7.5683 -7.4672 2.8014 22 6 4.4621 -2.6364 1.2498 23 6 4.3780 -1.1079 1.2552 24 6 2.2233 -1.1159 -0.0005 25 8 1.8375 -2.2653 -0.0006 26 1 -0.3633 1.0276 0.0005 27 1 -0.3634 -0.5134 -0.8902 28 1 -0.3633 -0.5142 0.8898 29 1 4.2629 1.4744 0.0010 30 1 5.3849 -0.6887 -1.2737 31 1 3.8312 -0.7769 -2.1368 32 1 4.9942 -2.9736 -2.1391 33 1 3.4569 -3.0554 -1.2455 34 1 6.2170 -2.6735 0.0008 35 1 4.6490 -5.0892 -0.4821 36 1 6.5073 -7.0366 -0.3533 37 1 5.4878 -7.0999 1.1043 38 1 9.2012 -6.9878 0.0408 39 1 10.7171 -7.8059 2.1036 40 1 8.9355 -7.5038 5.2974 41 1 8.8881 -10.2067 4.2383 42 1 11.5343 -8.8599 5.9713 43 1 11.5593 -9.3949 3.5984 44 1 6.7827 -7.4888 3.3701 45 1 3.4560 -3.0559 1.2452 46 1 4.9930 -2.9744 2.1398 47 1 5.3842 -0.6891 1.2754 48 1 3.8299 -0.7777 2.1376 There are 67 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 67 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_17849352_14644196.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 15:08:27 Heat of formation + Delta-G solvation = -57.495833 kcal Electronic energy + Delta-G solvation = -33050.982302 eV Core-core repulsion = 28495.127029 eV Total energy + Delta-G solvation = -4555.855273 eV No. of doubly occupied orbitals = 67 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 363.167 amu Computer time = 1.24 seconds Orbital eigenvalues (eV) -43.88348 -42.28909 -40.90139 -39.90816 -38.78070 -37.78003 -37.14553 -35.97420 -34.20146 -33.04861 -32.30347 -31.85444 -30.17716 -29.15806 -28.79776 -25.50784 -24.84190 -24.27662 -23.24743 -22.63331 -21.71652 -21.28706 -21.01638 -20.59729 -19.17906 -18.98600 -18.23115 -18.05138 -17.69877 -17.41713 -16.82143 -16.68077 -16.52863 -16.35958 -16.30742 -15.79768 -15.72802 -15.24277 -15.03812 -14.97501 -14.64181 -14.52889 -14.36906 -14.09359 -14.01401 -13.93174 -13.83075 -13.71882 -13.66817 -13.60021 -13.49798 -12.95404 -12.80379 -12.48522 -12.26758 -12.10770 -11.94623 -11.80915 -11.73202 -10.96057 -10.90103 -10.86931 -10.74970 -10.58199 -10.11351 -9.71114 -8.90437 -4.85736 0.46119 1.08495 1.16611 1.28740 1.63338 1.70144 1.88661 1.89340 1.95462 1.95671 2.26348 2.51472 2.71977 3.20615 3.23862 3.38578 3.57299 3.64752 3.78669 3.83264 3.84495 3.90598 3.99537 4.02372 4.04910 4.14532 4.23232 4.31082 4.36637 4.38620 4.41290 4.44615 4.47316 4.58181 4.60139 4.63649 4.68225 4.82889 4.83721 4.85683 5.00813 5.13541 5.32664 5.36245 5.42259 5.63769 5.89215 6.05286 6.20375 6.23540 6.40028 6.43034 6.66792 7.00369 7.21574 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.084 3.916 2 N -0.581 5.581 3 C 0.701 3.299 4 O -0.539 6.539 5 N -0.719 5.719 6 C 0.121 3.879 7 C -0.108 4.108 8 C -0.135 4.135 9 C 0.150 3.850 10 N -0.728 5.728 11 C 0.513 3.487 12 O -0.521 6.521 13 C -0.073 4.073 14 C 0.038 3.962 15 C -0.174 4.174 16 C -0.187 4.187 17 C -0.008 4.008 18 C -0.056 4.056 19 O -0.537 6.537 20 Si 0.716 3.284 21 N -0.535 5.535 22 C -0.137 4.137 23 C -0.109 4.109 24 C 0.532 3.468 25 O -0.455 6.455 26 H 0.098 0.902 27 H 0.079 0.921 28 H 0.079 0.921 29 H 0.442 0.558 30 H 0.092 0.908 31 H 0.081 0.919 32 H 0.082 0.918 33 H 0.088 0.912 34 H 0.092 0.908 35 H 0.402 0.598 36 H 0.117 0.883 37 H 0.099 0.901 38 H 0.136 0.864 39 H 0.141 0.859 40 H 0.114 0.886 41 H 0.378 0.622 42 H -0.258 1.258 43 H -0.257 1.257 44 H 0.412 0.588 45 H 0.083 0.917 46 H 0.078 0.922 47 H 0.091 0.909 48 H 0.078 0.922 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.357 -0.937 -3.333 3.480 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.057 4.057 2 N -0.328 5.328 3 C 0.402 3.598 4 O -0.411 6.411 5 N -0.383 5.383 6 C 0.030 3.970 7 C -0.147 4.147 8 C -0.173 4.173 9 C 0.045 3.955 10 N -0.380 5.380 11 C 0.298 3.702 12 O -0.396 6.396 13 C -0.114 4.114 14 C -0.076 4.076 15 C -0.198 4.198 16 C -0.212 4.212 17 C -0.122 4.122 18 C -0.165 4.165 19 O -0.344 6.344 20 Si 0.615 3.385 21 N -0.130 5.130 22 C -0.176 4.176 23 C -0.148 4.148 24 C 0.319 3.681 25 O -0.324 6.324 26 H 0.117 0.883 27 H 0.098 0.902 28 H 0.097 0.903 29 H 0.287 0.713 30 H 0.110 0.890 31 H 0.099 0.901 32 H 0.101 0.899 33 H 0.106 0.894 34 H 0.110 0.890 35 H 0.236 0.764 36 H 0.135 0.865 37 H 0.118 0.882 38 H 0.154 0.846 39 H 0.158 0.842 40 H 0.132 0.868 41 H 0.226 0.774 42 H -0.183 1.183 43 H -0.181 1.181 44 H 0.249 0.751 45 H 0.102 0.898 46 H 0.097 0.903 47 H 0.109 0.891 48 H 0.096 0.904 Dipole moment (debyes) X Y Z Total from point charges -0.051 -0.692 -2.173 2.282 hybrid contribution -1.230 -0.786 -0.349 1.500 sum -1.280 -1.478 -2.522 3.191 Atomic orbital electron populations 1.21910 0.74699 1.05396 1.03677 1.46348 1.09809 1.07989 1.68609 1.15944 0.82227 0.84185 0.77440 1.91050 1.75159 1.20274 1.54663 1.45604 1.06697 1.07079 1.78925 1.21172 0.94545 0.81439 0.99841 1.21597 1.01797 0.96336 0.94938 1.21934 1.02792 0.94573 0.98044 1.20914 1.00260 0.80009 0.94288 1.46016 1.30529 1.07313 1.54121 1.20580 0.80754 0.90131 0.78695 1.90766 1.39985 1.66667 1.42193 1.20140 0.96706 0.92639 1.01911 1.19480 0.95922 1.07718 0.84477 1.20581 0.91576 1.07944 0.99708 1.20670 0.98990 1.08788 0.92710 1.20762 0.84759 1.09598 0.97055 1.24769 1.11594 0.87016 0.93165 1.86580 1.71689 1.19454 1.56631 0.94204 0.74024 0.90180 0.80087 1.41800 1.09020 1.52522 1.09668 1.22054 1.02601 0.93850 0.99092 1.21619 1.01597 0.96884 0.94677 1.20648 0.88059 0.84915 0.74504 1.90758 1.78933 1.17532 1.45176 0.88289 0.90222 0.90256 0.71278 0.88978 0.90058 0.89906 0.89392 0.89041 0.76362 0.86492 0.88240 0.84599 0.84169 0.86824 0.77416 1.18305 1.18107 0.75130 0.89813 0.90335 0.89070 0.90367 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.08 -0.11 10.89 59.84 0.65 0.54 16 2 N -0.58 -0.19 3.01 -128.25 -0.39 -0.57 16 3 C 0.70 1.00 8.63 -87.83 -0.76 0.24 16 4 O -0.54 -2.75 17.24 5.33 0.09 -2.66 16 5 N -0.72 1.32 5.88 -53.87 -0.32 1.01 16 6 C 0.12 -0.27 1.01 -133.10 -0.13 -0.41 16 7 C -0.11 0.39 5.10 -26.96 -0.14 0.25 16 8 C -0.14 0.46 5.14 -26.68 -0.14 0.32 16 9 C 0.15 -0.32 2.44 -67.92 -0.17 -0.48 16 10 N -0.73 1.80 5.08 -53.79 -0.27 1.52 16 11 C 0.51 -0.06 7.79 -10.99 -0.09 -0.15 16 12 O -0.52 -2.16 15.70 5.55 0.09 -2.08 16 13 C -0.07 0.16 6.24 -29.04 -0.18 -0.02 16 14 C 0.04 0.04 5.66 -81.79 -0.46 -0.43 16 15 C -0.17 -0.33 10.77 -39.78 -0.43 -0.76 16 16 C -0.19 -0.33 9.37 -39.78 -0.37 -0.70 16 17 C -0.01 -0.01 6.50 -81.79 -0.53 -0.54 16 18 C -0.06 -0.03 3.08 36.01 0.11 0.09 16 19 O -0.54 -0.77 12.88 -35.23 -0.45 -1.22 16 20 Si 0.72 -0.29 30.60 -169.99 -5.20 -5.49 16 21 N -0.54 -0.50 6.07 -5.44 -0.03 -0.53 16 22 C -0.14 0.20 5.25 -26.68 -0.14 0.06 16 23 C -0.11 0.27 5.10 -26.96 -0.14 0.13 16 24 C 0.53 -0.08 6.53 -10.71 -0.07 -0.15 16 25 O -0.46 -0.58 13.94 5.59 0.08 -0.50 16 26 H 0.10 -0.11 7.45 -51.93 -0.39 -0.49 16 27 H 0.08 -0.19 8.14 -51.93 -0.42 -0.61 16 28 H 0.08 -0.17 8.14 -51.93 -0.42 -0.59 16 29 H 0.44 -1.68 8.96 -40.82 -0.37 -2.05 16 30 H 0.09 -0.44 8.14 -51.93 -0.42 -0.86 16 31 H 0.08 -0.28 8.14 -51.92 -0.42 -0.70 16 32 H 0.08 -0.34 8.14 -51.93 -0.42 -0.76 16 33 H 0.09 -0.20 6.11 -51.93 -0.32 -0.52 16 34 H 0.09 -0.07 7.58 -51.93 -0.39 -0.47 16 35 H 0.40 -1.90 8.60 -40.82 -0.35 -2.25 16 36 H 0.12 -0.49 8.14 -51.93 -0.42 -0.92 16 37 H 0.10 -0.41 8.14 -51.93 -0.42 -0.83 16 38 H 0.14 0.10 8.06 -52.49 -0.42 -0.32 16 39 H 0.14 0.04 6.24 -52.49 -0.33 -0.29 16 40 H 0.11 -0.01 7.96 -51.93 -0.41 -0.42 16 41 H 0.38 -0.46 8.70 45.56 0.40 -0.06 16 42 H -0.26 -0.65 7.11 56.52 0.40 -0.24 16 43 H -0.26 -0.38 7.11 56.52 0.40 0.02 16 44 H 0.41 -0.26 8.96 -40.82 -0.37 -0.63 16 45 H 0.08 -0.03 6.11 -51.93 -0.32 -0.35 16 46 H 0.08 0.01 8.14 -51.92 -0.42 -0.41 16 47 H 0.09 -0.31 8.14 -51.93 -0.42 -0.73 16 48 H 0.08 -0.15 8.14 -51.93 -0.42 -0.57 16 LS Contribution 390.26 15.07 5.88 5.88 Total: 0.00 -11.53 390.26 -10.20 -21.73 By element: Atomic # 1 Polarization: -8.37 SS G_CDS: -6.69 Total: -15.06 kcal Atomic # 6 Polarization: 0.96 SS G_CDS: -2.98 Total: -2.02 kcal Atomic # 7 Polarization: 2.44 SS G_CDS: -1.01 Total: 1.43 kcal Atomic # 8 Polarization: -6.26 SS G_CDS: -0.20 Total: -6.46 kcal Atomic # 14 Polarization: -0.29 SS G_CDS: -5.20 Total: -5.49 kcal Total LS contribution 5.88 Total: 5.88 kcal Total: -11.53 -10.20 -21.73 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17849352_14644196.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -35.770 kcal (2) G-P(sol) polarization free energy of solvation -11.530 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -47.300 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.196 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.726 kcal (6) G-S(sol) free energy of system = (1) + (5) -57.496 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.24 seconds