Wall clock time and date at job start Sun Mar 7 2021 15:08:25 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46495 * 1 3 3 C 1.33866 * 124.19821 * 2 1 4 4 O 1.21543 * 123.78718 * 359.97438 * 3 2 1 5 5 N 1.34667 * 112.42521 * 179.97438 * 3 2 1 6 6 C 1.46862 * 106.42388 * 0.02562 * 5 3 2 7 7 C 1.52471 * 110.48127 * 118.54202 * 6 5 3 8 8 C 1.53081 * 109.58972 * 181.30483 * 7 6 5 9 9 C 1.53010 * 109.41741 * 300.84823 * 8 7 6 10 10 N 1.46497 * 109.46712 * 180.49697 * 9 8 7 11 11 C 1.34775 * 120.00292 * 155.00067 * 10 9 8 12 12 O 1.21286 * 119.99711 * 359.97438 * 11 10 9 13 13 C 1.50699 * 120.00269 * 179.97438 * 11 10 9 14 14 C 1.50701 * 109.47350 * 180.02562 * 13 11 10 15 15 C 1.34849 * 125.88953 * 274.95684 * 14 13 11 16 16 C 1.40895 * 107.41486 * 179.79987 * 15 14 13 17 17 C 1.34851 * 107.41829 * 0.38657 * 16 15 14 18 18 C 1.50699 * 125.89054 * 179.88330 * 17 16 15 19 19 O 1.42894 * 109.47188 * 244.68202 * 18 17 16 20 20 Si 1.86298 * 109.46950 * 4.68876 * 18 17 16 21 21 N 1.36338 * 125.89105 * 94.99589 * 14 13 11 22 22 C 1.53013 * 109.49500 * 60.48710 * 9 8 7 23 23 C 1.52472 * 110.47937 * 241.44258 * 6 5 3 24 24 C 1.34920 * 124.19718 * 180.02562 * 2 1 3 25 25 O 1.21237 * 127.25018 * 359.97438 * 24 2 1 26 26 H 1.08998 * 109.47022 * 359.97075 * 1 2 3 27 27 H 1.09000 * 109.47240 * 119.97533 * 1 2 3 28 28 H 1.09000 * 109.46956 * 239.97466 * 1 2 3 29 29 H 0.97005 * 126.79195 * 180.02562 * 5 3 2 30 30 H 1.08999 * 109.45412 * 61.26230 * 7 6 5 31 31 H 1.09008 * 109.44613 * 301.33779 * 7 6 5 32 32 H 1.09002 * 109.47518 * 180.86460 * 8 7 6 33 33 H 1.08991 * 109.48330 * 60.83468 * 8 7 6 34 34 H 1.09003 * 109.46533 * 300.48275 * 9 8 7 35 35 H 0.97005 * 120.00086 * 334.99912 * 10 9 8 36 36 H 1.08992 * 109.47219 * 59.99936 * 13 11 10 37 37 H 1.08999 * 109.46957 * 299.99971 * 13 11 10 38 38 H 1.08001 * 126.29324 * 0.05728 * 15 14 13 39 39 H 1.08001 * 126.28894 * 180.23430 * 16 15 14 40 40 H 1.09006 * 109.46662 * 124.68471 * 18 17 16 41 41 H 0.96709 * 113.99337 * 60.00344 * 19 18 17 42 42 H 1.48506 * 109.99834 * 180.02562 * 20 18 17 43 43 H 1.48502 * 110.00011 * 301.31529 * 20 18 17 44 44 H 0.97006 * 125.63572 * 359.97438 * 21 14 13 45 45 H 1.08999 * 109.48013 * 59.50474 * 22 9 8 46 46 H 1.09009 * 109.47575 * 179.53216 * 22 9 8 47 47 H 1.09003 * 109.45370 * 298.73066 * 23 6 5 48 48 H 1.09002 * 109.45275 * 58.66671 * 23 6 5 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4649 0.0000 0.0000 3 6 2.2174 1.1072 0.0000 4 8 1.7618 2.2340 -0.0005 5 7 3.5357 0.8324 0.0006 6 6 3.6548 -0.6313 0.0003 7 6 4.3788 -1.1075 -1.2542 8 6 4.4629 -2.6360 -1.2493 9 6 5.2139 -3.1002 0.0004 10 7 5.3053 -4.5623 0.0002 11 6 6.3012 -5.1754 0.6700 12 8 7.1221 -4.5165 1.2727 13 6 6.3949 -6.6795 0.6703 14 6 7.5871 -7.1084 1.4862 15 6 8.8565 -7.2043 1.0412 16 6 9.6512 -7.6330 2.1227 17 6 8.8359 -7.7910 3.1851 18 6 9.2547 -8.2414 4.5609 19 8 8.6481 -9.5013 4.8549 20 14 11.1086 -8.4156 4.6197 21 7 7.5683 -7.4672 2.8014 22 6 4.4621 -2.6364 1.2498 23 6 4.3780 -1.1079 1.2552 24 6 2.2233 -1.1159 -0.0005 25 8 1.8375 -2.2653 -0.0006 26 1 -0.3633 1.0276 0.0005 27 1 -0.3634 -0.5134 -0.8902 28 1 -0.3633 -0.5142 0.8898 29 1 4.2629 1.4744 0.0010 30 1 5.3849 -0.6887 -1.2737 31 1 3.8312 -0.7769 -2.1368 32 1 4.9942 -2.9736 -2.1391 33 1 3.4569 -3.0554 -1.2455 34 1 6.2170 -2.6735 0.0008 35 1 4.6490 -5.0892 -0.4821 36 1 6.5073 -7.0366 -0.3533 37 1 5.4878 -7.0999 1.1043 38 1 9.2012 -6.9878 0.0408 39 1 10.7171 -7.8059 2.1036 40 1 8.9355 -7.5038 5.2974 41 1 8.8881 -10.2067 4.2383 42 1 11.5343 -8.8599 5.9713 43 1 11.5593 -9.3949 3.5984 44 1 6.7827 -7.4888 3.3701 45 1 3.4560 -3.0559 1.2452 46 1 4.9930 -2.9744 2.1398 47 1 5.3842 -0.6891 1.2754 48 1 3.8299 -0.7777 2.1376 There are 67 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 67 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_17849352_14644196.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 15:08:25 Heat of formation + Delta-G solvation = -63.345820 kcal Electronic energy + Delta-G solvation = -33051.235977 eV Core-core repulsion = 28495.127029 eV Total energy + Delta-G solvation = -4556.108947 eV No. of doubly occupied orbitals = 67 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 363.167 amu Computer time = 1.30 seconds Orbital eigenvalues (eV) -43.86441 -42.31127 -40.86479 -39.96766 -38.72920 -37.84292 -37.24163 -35.93900 -34.14892 -32.98941 -32.11368 -31.90482 -30.13504 -29.09755 -28.73042 -25.50461 -24.83591 -24.10136 -23.18137 -22.55693 -21.67758 -21.33636 -21.01207 -20.53962 -19.16532 -19.01909 -18.15823 -18.04487 -17.63094 -17.39786 -16.80945 -16.64623 -16.56688 -16.35580 -16.31357 -15.75791 -15.69138 -15.27721 -14.98674 -14.93895 -14.64207 -14.45821 -14.28488 -14.07501 -14.02560 -13.84340 -13.79927 -13.72101 -13.57883 -13.45262 -13.39078 -12.85633 -12.73686 -12.29156 -12.17620 -12.17135 -11.96686 -11.83419 -11.79280 -10.94887 -10.90769 -10.89275 -10.79664 -10.51429 -10.02610 -9.77822 -8.94869 -4.85426 0.44742 1.11705 1.14413 1.27932 1.66811 1.68977 1.82489 1.90419 1.91189 2.01745 2.32775 2.53959 2.78445 3.35480 3.39808 3.41287 3.71772 3.76071 3.81769 3.91412 3.97271 4.07018 4.15219 4.19514 4.24525 4.35556 4.37540 4.42195 4.44745 4.50736 4.52101 4.55226 4.60507 4.66344 4.71129 4.80979 4.82362 4.89244 4.99686 5.04671 5.17845 5.25758 5.27978 5.31518 5.55831 5.72310 5.89188 6.01289 6.15551 6.27083 6.43938 6.58308 6.69652 6.98665 7.32192 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.078 3.922 2 N -0.585 5.585 3 C 0.698 3.302 4 O -0.581 6.581 5 N -0.702 5.702 6 C 0.128 3.872 7 C -0.106 4.106 8 C -0.126 4.126 9 C 0.151 3.849 10 N -0.716 5.716 11 C 0.513 3.487 12 O -0.569 6.569 13 C -0.070 4.070 14 C 0.036 3.964 15 C -0.199 4.199 16 C -0.201 4.201 17 C -0.018 4.018 18 C -0.061 4.061 19 O -0.552 6.552 20 Si 0.790 3.210 21 N -0.537 5.537 22 C -0.130 4.130 23 C -0.105 4.105 24 C 0.529 3.471 25 O -0.470 6.470 26 H 0.093 0.907 27 H 0.090 0.910 28 H 0.087 0.913 29 H 0.452 0.548 30 H 0.110 0.890 31 H 0.084 0.916 32 H 0.096 0.904 33 H 0.080 0.920 34 H 0.082 0.918 35 H 0.415 0.585 36 H 0.142 0.858 37 H 0.123 0.877 38 H 0.142 0.858 39 H 0.149 0.851 40 H 0.118 0.882 41 H 0.388 0.612 42 H -0.297 1.297 43 H -0.280 1.280 44 H 0.418 0.582 45 H 0.074 0.926 46 H 0.061 0.939 47 H 0.105 0.895 48 H 0.072 0.928 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.441 -1.233 -4.370 4.562 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.062 4.062 2 N -0.331 5.331 3 C 0.399 3.601 4 O -0.457 6.457 5 N -0.366 5.366 6 C 0.037 3.963 7 C -0.145 4.145 8 C -0.165 4.165 9 C 0.047 3.953 10 N -0.367 5.367 11 C 0.300 3.700 12 O -0.448 6.448 13 C -0.110 4.110 14 C -0.078 4.078 15 C -0.224 4.224 16 C -0.226 4.226 17 C -0.132 4.132 18 C -0.170 4.170 19 O -0.360 6.360 20 Si 0.693 3.307 21 N -0.133 5.133 22 C -0.169 4.169 23 C -0.144 4.144 24 C 0.317 3.683 25 O -0.339 6.339 26 H 0.112 0.888 27 H 0.109 0.891 28 H 0.105 0.895 29 H 0.299 0.701 30 H 0.129 0.871 31 H 0.103 0.897 32 H 0.115 0.885 33 H 0.099 0.901 34 H 0.100 0.900 35 H 0.252 0.748 36 H 0.160 0.840 37 H 0.141 0.859 38 H 0.160 0.840 39 H 0.167 0.833 40 H 0.136 0.864 41 H 0.237 0.763 42 H -0.225 1.225 43 H -0.206 1.206 44 H 0.255 0.745 45 H 0.093 0.907 46 H 0.079 0.921 47 H 0.124 0.876 48 H 0.091 0.909 Dipole moment (debyes) X Y Z Total from point charges -0.158 -1.008 -3.242 3.399 hybrid contribution -1.233 -0.741 -0.013 1.439 sum -1.392 -1.750 -3.255 3.949 Atomic orbital electron populations 1.22038 0.74154 1.05389 1.04640 1.46465 1.10428 1.07922 1.68282 1.16096 0.83061 0.83760 0.77166 1.91019 1.76030 1.21833 1.56835 1.45557 1.05893 1.07576 1.77609 1.21204 0.93432 0.80850 1.00768 1.21650 1.02598 0.96227 0.94007 1.21861 1.02226 0.94592 0.97776 1.20890 0.99744 0.80143 0.94573 1.45934 1.30107 1.07399 1.53304 1.20890 0.80325 0.90809 0.77952 1.90750 1.41877 1.67748 1.44380 1.20254 0.96511 0.91190 1.03040 1.19920 0.96735 1.06619 0.84551 1.20838 0.92322 1.08979 1.00228 1.20909 0.99656 1.09049 0.93003 1.20876 0.85081 1.09937 0.97290 1.24928 1.12227 0.86857 0.92957 1.86547 1.72140 1.20077 1.57271 0.93267 0.72287 0.88702 0.76395 1.41900 1.09147 1.52298 1.09929 1.21944 1.01754 0.94425 0.98764 1.21599 1.02255 0.96277 0.94297 1.20962 0.88808 0.84571 0.73997 1.90750 1.79385 1.17964 1.45845 0.88778 0.89123 0.89477 0.70074 0.87120 0.89717 0.88504 0.90134 0.90008 0.74796 0.83987 0.85880 0.84046 0.83347 0.86422 0.76293 1.22520 1.20645 0.74464 0.90750 0.92067 0.87628 0.90937 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.08 -0.16 10.89 127.77 1.39 1.23 16 2 N -0.58 -0.56 3.01 -796.78 -2.40 -2.96 16 3 C 0.70 2.27 8.63 179.37 1.55 3.82 16 4 O -0.58 -6.54 17.24 -3.85 -0.07 -6.61 16 5 N -0.70 2.86 5.88 -442.70 -2.60 0.26 16 6 C 0.13 -0.66 1.01 2.57 0.00 -0.66 16 7 C -0.11 0.91 5.10 30.45 0.16 1.07 16 8 C -0.13 1.02 5.14 30.62 0.16 1.18 16 9 C 0.15 -0.74 2.44 45.00 0.11 -0.63 16 10 N -0.72 4.18 5.08 -442.50 -2.25 1.94 16 11 C 0.51 -0.39 7.79 87.66 0.68 0.30 16 12 O -0.57 -4.96 15.70 -3.05 -0.05 -5.01 16 13 C -0.07 0.39 6.24 29.10 0.18 0.57 16 14 C 0.04 0.06 5.66 41.08 0.23 0.29 16 15 C -0.20 -0.81 10.77 22.14 0.24 -0.57 16 16 C -0.20 -0.80 9.37 22.14 0.21 -0.60 16 17 C -0.02 -0.06 6.50 41.08 0.27 0.21 16 18 C -0.06 -0.08 3.08 71.24 0.22 0.14 16 19 O -0.55 -1.76 12.88 -148.98 -1.92 -3.68 16 20 Si 0.79 -0.20 30.60 68.60 2.10 1.90 16 21 N -0.54 -1.04 6.07 -171.12 -1.04 -2.07 16 22 C -0.13 0.37 5.25 30.63 0.16 0.53 16 23 C -0.11 0.55 5.10 30.45 0.16 0.70 16 24 C 0.53 -0.23 6.53 87.77 0.57 0.34 16 25 O -0.47 -1.12 13.94 -2.90 -0.04 -1.16 16 26 H 0.09 -0.09 7.45 -2.39 -0.02 -0.11 16 27 H 0.09 -0.41 8.14 -2.39 -0.02 -0.43 16 28 H 0.09 -0.34 8.14 -2.39 -0.02 -0.36 16 29 H 0.45 -3.75 8.96 -92.70 -0.83 -4.58 16 30 H 0.11 -1.30 8.14 -2.39 -0.02 -1.32 16 31 H 0.08 -0.71 8.14 -2.38 -0.02 -0.73 16 32 H 0.10 -1.00 8.14 -2.39 -0.02 -1.01 16 33 H 0.08 -0.47 6.11 -2.39 -0.01 -0.48 16 34 H 0.08 -0.17 7.58 -2.39 -0.02 -0.19 16 35 H 0.42 -4.57 8.60 -92.70 -0.80 -5.37 16 36 H 0.14 -1.50 8.14 -2.39 -0.02 -1.52 16 37 H 0.12 -1.26 8.14 -2.39 -0.02 -1.28 16 38 H 0.14 0.25 8.06 -2.91 -0.02 0.23 16 39 H 0.15 0.15 6.24 -2.91 -0.02 0.13 16 40 H 0.12 0.02 7.96 -2.38 -0.02 0.00 16 41 H 0.39 -0.79 8.70 -74.05 -0.64 -1.44 16 42 H -0.30 -1.87 7.11 99.48 0.71 -1.16 16 43 H -0.28 -1.00 7.11 99.48 0.71 -0.29 16 44 H 0.42 -0.52 8.96 -92.70 -0.83 -1.35 16 45 H 0.07 -0.05 6.11 -2.39 -0.01 -0.07 16 46 H 0.06 0.07 8.14 -2.38 -0.02 0.05 16 47 H 0.11 -0.82 8.14 -2.39 -0.02 -0.84 16 48 H 0.07 -0.27 8.14 -2.39 -0.02 -0.29 16 Total: 0.00 -27.88 390.26 -3.99 -31.87 By element: Atomic # 1 Polarization: -20.39 SS G_CDS: -2.01 Total: -22.40 kcal Atomic # 6 Polarization: 1.64 SS G_CDS: 6.28 Total: 7.92 kcal Atomic # 7 Polarization: 5.45 SS G_CDS: -8.29 Total: -2.83 kcal Atomic # 8 Polarization: -14.38 SS G_CDS: -2.07 Total: -16.46 kcal Atomic # 14 Polarization: -0.20 SS G_CDS: 2.10 Total: 1.90 kcal Total: -27.88 -3.99 -31.87 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17849352_14644196.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -31.478 kcal (2) G-P(sol) polarization free energy of solvation -27.877 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -59.356 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -3.990 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -31.867 kcal (6) G-S(sol) free energy of system = (1) + (5) -63.346 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.30 seconds