Wall clock time and date at job start Sun Mar 7 2021 15:08:51 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46496 * 1 3 3 C 1.33872 * 124.19509 * 2 1 4 4 O 1.21532 * 123.78908 * 0.02562 * 3 2 1 5 5 N 1.34671 * 112.41644 * 180.02562 * 3 2 1 6 6 C 1.46868 * 106.43043 * 0.02562 * 5 3 2 7 7 C 1.52466 * 110.47676 * 118.54219 * 6 5 3 8 8 C 1.53080 * 109.58519 * 181.30752 * 7 6 5 9 9 C 1.53016 * 109.41795 * 300.84852 * 8 7 6 10 10 N 1.46498 * 109.46871 * 180.49430 * 9 8 7 11 11 C 1.34780 * 119.99973 * 155.00076 * 10 9 8 12 12 O 1.21279 * 119.99783 * 0.02562 * 11 10 9 13 13 C 1.50695 * 119.99970 * 179.97438 * 11 10 9 14 14 C 1.53000 * 109.47087 * 180.02562 * 13 11 10 15 15 O 1.42898 * 109.47000 * 180.02562 * 14 13 11 16 16 C 1.35898 * 117.00022 * 180.02562 * 15 14 13 17 17 C 1.38735 * 120.05680 * 359.71948 * 16 15 14 18 18 C 1.38142 * 119.94796 * 179.74520 * 17 16 15 19 19 C 1.38273 * 120.05100 * 0.50782 * 18 17 16 20 20 C 1.50699 * 119.94080 * 179.74191 * 19 18 17 21 21 O 1.42901 * 109.47339 * 245.02096 * 20 19 18 22 22 Si 1.86297 * 109.47231 * 5.02647 * 20 19 18 23 23 C 1.38259 * 120.11431 * 359.76819 * 19 18 17 24 24 C 1.38153 * 120.05515 * 359.97438 * 23 19 18 25 25 C 1.53017 * 109.49571 * 60.48567 * 9 8 7 26 26 C 1.52470 * 110.47900 * 241.44580 * 6 5 3 27 27 C 1.34925 * 124.19616 * 180.02562 * 2 1 3 28 28 O 1.21232 * 127.25041 * 359.97438 * 27 2 1 29 29 H 1.09006 * 109.47503 * 359.97438 * 1 2 3 30 30 H 1.09001 * 109.47581 * 119.97360 * 1 2 3 31 31 H 1.09001 * 109.47496 * 239.97559 * 1 2 3 32 32 H 0.97003 * 126.78379 * 180.02562 * 5 3 2 33 33 H 1.08995 * 109.45374 * 61.27078 * 7 6 5 34 34 H 1.09003 * 109.45173 * 301.33677 * 7 6 5 35 35 H 1.09002 * 109.48011 * 180.86729 * 8 7 6 36 36 H 1.08997 * 109.48584 * 60.83688 * 8 7 6 37 37 H 1.09002 * 109.46469 * 300.48356 * 9 8 7 38 38 H 0.96999 * 120.00161 * 335.00318 * 10 9 8 39 39 H 1.09001 * 109.47293 * 300.00438 * 13 11 10 40 40 H 1.09003 * 109.47135 * 60.00250 * 13 11 10 41 41 H 1.09008 * 109.46943 * 299.99818 * 14 13 11 42 42 H 1.08995 * 109.47315 * 60.00047 * 14 13 11 43 43 H 1.08001 * 120.02129 * 359.97438 * 17 16 15 44 44 H 1.07999 * 119.97429 * 180.22988 * 18 17 16 45 45 H 1.09005 * 109.46903 * 125.02718 * 20 19 18 46 46 H 0.96708 * 113.99447 * 60.00550 * 21 20 19 47 47 H 1.48498 * 110.00230 * 58.67920 * 22 20 19 48 48 H 1.48508 * 110.00065 * 179.97438 * 22 20 19 49 49 H 1.08000 * 119.97627 * 179.97438 * 23 19 18 50 50 H 1.08002 * 120.02592 * 179.97438 * 24 23 19 51 51 H 1.09000 * 109.47703 * 59.50188 * 25 9 8 52 52 H 1.09001 * 109.47917 * 179.52680 * 25 9 8 53 53 H 1.08996 * 109.45235 * 298.73325 * 26 6 5 54 54 H 1.09001 * 109.45307 * 58.66128 * 26 6 5 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 6 2.2173 1.1073 0.0000 4 8 1.7618 2.2340 0.0005 5 7 3.5357 0.8324 -0.0006 6 6 3.6548 -0.6315 -0.0016 7 6 4.3779 -1.1069 -1.2569 8 6 4.4619 -2.6353 -1.2529 9 6 5.2139 -3.1002 -0.0039 10 7 5.3052 -4.5623 -0.0049 11 6 6.3017 -5.1758 0.6640 12 8 7.1224 -4.5173 1.2671 13 6 6.3953 -6.6798 0.6634 14 6 7.6063 -7.1157 1.4907 15 8 7.6954 -8.5419 1.4896 16 6 8.7233 -9.0964 2.1844 17 6 9.6311 -8.2842 2.8486 18 6 10.6722 -8.8504 3.5585 19 6 10.8160 -10.2251 3.5987 20 6 11.9560 -10.8398 4.3691 21 8 12.8362 -11.5093 3.4641 22 14 12.8899 -9.5025 5.2690 23 6 9.9160 -11.0364 2.9329 24 6 8.8701 -10.4753 2.2260 25 6 4.4630 -2.6370 1.2463 26 6 4.3789 -1.1086 1.2525 27 6 2.2233 -1.1160 -0.0005 28 8 1.8375 -2.2653 -0.0006 29 1 -0.3634 1.0277 0.0005 30 1 -0.3634 -0.5134 -0.8902 31 1 -0.3634 -0.5142 0.8897 32 1 4.2629 1.4744 -0.0003 33 1 5.3840 -0.6881 -1.2768 34 1 3.8297 -0.7758 -2.1389 35 1 4.9927 -2.9726 -2.1432 36 1 3.4559 -3.0548 -1.2486 37 1 6.2170 -2.6736 -0.0040 38 1 4.6486 -5.0890 -0.4870 39 1 5.4884 -7.1005 1.0978 40 1 6.5069 -7.0365 -0.3605 41 1 8.5133 -6.6950 1.0565 42 1 7.4943 -6.7591 2.5145 43 1 9.5217 -7.2104 2.8137 44 1 11.3769 -8.2187 4.0788 45 1 11.5625 -11.5564 5.0901 46 1 13.2244 -10.9312 2.7930 47 1 11.9780 -8.7779 6.1902 48 1 14.0166 -10.0960 6.0332 49 1 10.0307 -12.1098 2.9655 50 1 8.1676 -11.1095 1.7057 51 1 3.4569 -3.0565 1.2422 52 1 4.9944 -2.9755 2.1357 53 1 5.3850 -0.6898 1.2722 54 1 3.8314 -0.7788 2.1354 There are 75 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 75 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_17849352_4549602.mol2 54 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 15:08:51 Heat of formation + Delta-G solvation = -118.437122 kcal Electronic energy + Delta-G solvation = -37724.454145 eV Core-core repulsion = 32628.936219 eV Total energy + Delta-G solvation = -5095.517926 eV No. of doubly occupied orbitals = 75 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 404.187 amu Computer time = 1.83 seconds Orbital eigenvalues (eV) -43.85895 -41.41149 -40.96439 -40.04388 -39.19341 -38.72147 -37.28092 -37.14273 -35.97595 -34.19019 -33.23685 -32.11665 -32.03462 -31.44120 -29.66853 -28.97801 -26.60834 -25.72640 -24.90337 -24.11054 -23.59846 -22.99394 -22.45726 -22.13546 -21.34126 -20.54263 -19.48649 -19.15441 -18.32013 -18.05336 -17.91074 -17.55564 -17.44966 -17.30582 -16.91929 -16.67425 -16.56157 -16.42949 -16.12141 -15.91159 -15.73957 -15.66202 -15.46545 -14.97950 -14.80922 -14.69015 -14.47370 -14.39164 -14.28549 -14.17762 -13.97552 -13.76590 -13.70086 -13.55835 -13.53380 -13.40226 -12.91190 -12.86404 -12.74168 -12.29194 -12.21089 -12.18787 -12.03392 -11.96831 -11.80646 -11.75100 -11.70250 -10.98448 -10.93728 -10.89797 -10.51054 -10.40958 -10.08734 -10.03771 -9.20878 -5.01040 0.28853 0.31039 0.45372 1.13436 1.32508 1.57382 1.62755 1.73702 1.83235 1.95529 2.02531 2.50331 2.66462 2.78931 3.35654 3.41195 3.56100 3.60104 3.72859 3.75119 3.84539 3.88812 3.92810 3.93518 3.98961 4.05048 4.13786 4.19089 4.27313 4.35381 4.35822 4.37635 4.42397 4.44729 4.49799 4.52690 4.55204 4.59540 4.67561 4.71430 4.72156 4.80576 4.80916 4.89796 4.98116 4.99611 5.04455 5.17216 5.18553 5.24375 5.29340 5.50049 5.50138 5.72700 5.73116 5.89953 6.27674 6.33848 6.51164 6.78962 6.99467 7.19717 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.078 3.922 2 N -0.584 5.584 3 C 0.698 3.302 4 O -0.580 6.580 5 N -0.702 5.702 6 C 0.128 3.872 7 C -0.105 4.105 8 C -0.127 4.127 9 C 0.150 3.850 10 N -0.713 5.713 11 C 0.522 3.478 12 O -0.577 6.577 13 C -0.135 4.135 14 C 0.073 3.927 15 O -0.322 6.322 16 C 0.123 3.877 17 C -0.208 4.208 18 C -0.078 4.078 19 C -0.163 4.163 20 C -0.066 4.066 21 O -0.556 6.556 22 Si 0.769 3.231 23 C -0.061 4.061 24 C -0.160 4.160 25 C -0.132 4.132 26 C -0.105 4.105 27 C 0.528 3.472 28 O -0.471 6.471 29 H 0.093 0.907 30 H 0.090 0.910 31 H 0.086 0.914 32 H 0.452 0.548 33 H 0.112 0.888 34 H 0.084 0.916 35 H 0.097 0.903 36 H 0.079 0.921 37 H 0.087 0.913 38 H 0.416 0.584 39 H 0.121 0.879 40 H 0.127 0.873 41 H 0.070 0.930 42 H 0.064 0.936 43 H 0.143 0.857 44 H 0.146 0.854 45 H 0.106 0.894 46 H 0.395 0.605 47 H -0.289 1.289 48 H -0.298 1.298 49 H 0.138 0.862 50 H 0.140 0.860 51 H 0.073 0.927 52 H 0.064 0.936 53 H 0.107 0.893 54 H 0.072 0.928 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.228 0.708 -4.934 4.990 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.062 4.062 2 N -0.331 5.331 3 C 0.399 3.601 4 O -0.457 6.457 5 N -0.366 5.366 6 C 0.037 3.963 7 C -0.144 4.144 8 C -0.165 4.165 9 C 0.045 3.955 10 N -0.364 5.364 11 C 0.310 3.690 12 O -0.457 6.457 13 C -0.175 4.175 14 C -0.003 4.003 15 O -0.236 6.236 16 C 0.078 3.922 17 C -0.227 4.227 18 C -0.095 4.095 19 C -0.163 4.163 20 C -0.177 4.177 21 O -0.364 6.364 22 Si 0.676 3.324 23 C -0.079 4.079 24 C -0.178 4.178 25 C -0.171 4.171 26 C -0.144 4.144 27 C 0.316 3.684 28 O -0.340 6.340 29 H 0.112 0.888 30 H 0.108 0.892 31 H 0.105 0.895 32 H 0.299 0.701 33 H 0.130 0.870 34 H 0.103 0.897 35 H 0.115 0.885 36 H 0.098 0.902 37 H 0.105 0.895 38 H 0.253 0.747 39 H 0.140 0.860 40 H 0.145 0.855 41 H 0.088 0.912 42 H 0.082 0.918 43 H 0.160 0.840 44 H 0.163 0.837 45 H 0.123 0.877 46 H 0.245 0.755 47 H -0.216 1.216 48 H -0.227 1.227 49 H 0.156 0.844 50 H 0.158 0.842 51 H 0.092 0.908 52 H 0.083 0.917 53 H 0.126 0.874 54 H 0.091 0.909 Dipole moment (debyes) X Y Z Total from point charges 0.161 0.855 -3.511 3.617 hybrid contribution -0.750 -0.100 0.208 0.785 sum -0.589 0.756 -3.303 3.439 Atomic orbital electron populations 1.22033 0.74196 1.05374 1.04612 1.46464 1.10405 1.07932 1.68272 1.16097 0.83078 0.83748 0.77172 1.91017 1.76024 1.21836 1.56808 1.45550 1.05870 1.07549 1.77624 1.21208 0.93384 0.80865 1.00806 1.21644 1.02673 0.96104 0.94008 1.21869 1.02220 0.94698 0.97761 1.20953 1.00043 0.79771 0.94709 1.45918 1.29883 1.07655 1.52952 1.20536 0.80445 0.90252 0.77807 1.90731 1.42206 1.67980 1.44806 1.21451 1.00178 0.91304 1.04562 1.22473 0.99362 0.77414 1.01010 1.85961 1.46096 1.23266 1.68312 1.19178 0.87736 0.93001 0.92274 1.21434 0.97585 1.00856 1.02829 1.20995 0.97258 0.94012 0.97265 1.20323 0.99419 0.93781 1.02821 1.25052 0.91976 1.04446 0.96190 1.86463 1.62585 1.40167 1.47192 0.93821 0.77762 0.79217 0.81583 1.20973 0.92160 1.00555 0.94187 1.20666 1.01121 0.91986 1.04065 1.21965 1.01833 0.94525 0.98784 1.21600 1.02345 0.96171 0.94287 1.20983 0.88861 0.84560 0.73991 1.90753 1.79407 1.18016 1.45867 0.88779 0.89169 0.89501 0.70053 0.86975 0.89742 0.88487 0.90214 0.89538 0.74688 0.86046 0.85511 0.91150 0.91755 0.83976 0.83651 0.87665 0.75540 1.21647 1.22655 0.84426 0.84170 0.90808 0.91710 0.87430 0.90896 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.08 -0.17 10.89 127.77 1.39 1.22 16 2 N -0.58 -0.36 3.01 -796.76 -2.40 -2.76 16 3 C 0.70 1.96 8.63 179.37 1.55 3.51 16 4 O -0.58 -6.30 17.24 -3.82 -0.07 -6.37 16 5 N -0.70 3.31 5.88 -442.70 -2.60 0.71 16 6 C 0.13 -0.74 1.01 2.57 0.00 -0.74 16 7 C -0.11 0.98 5.10 30.44 0.16 1.14 16 8 C -0.13 1.10 5.14 30.63 0.16 1.26 16 9 C 0.15 -0.86 2.44 45.00 0.11 -0.75 16 10 N -0.71 4.50 5.08 -442.48 -2.25 2.25 16 11 C 0.52 -1.02 7.79 87.65 0.68 -0.34 16 12 O -0.58 -3.39 15.64 -3.03 -0.05 -3.44 16 13 C -0.14 0.78 6.07 29.85 0.18 0.96 16 14 C 0.07 -0.06 4.03 71.98 0.29 0.23 16 15 O -0.32 -0.78 10.14 -92.40 -0.94 -1.72 16 16 C 0.12 0.43 6.69 22.51 0.15 0.58 16 17 C -0.21 -0.38 9.04 22.37 0.20 -0.17 16 18 C -0.08 -0.03 8.66 22.26 0.19 0.16 16 19 C -0.16 -0.22 5.35 -19.85 -0.11 -0.33 16 20 C -0.07 -0.03 2.80 71.24 0.20 0.17 16 21 O -0.56 -0.52 12.83 -148.98 -1.91 -2.43 16 22 Si 0.77 -0.79 29.80 68.60 2.04 1.25 16 23 C -0.06 -0.13 9.68 22.25 0.22 0.08 16 24 C -0.16 -0.44 9.99 22.37 0.22 -0.22 16 25 C -0.13 0.48 5.25 30.62 0.16 0.64 16 26 C -0.11 0.64 5.10 30.44 0.16 0.80 16 27 C 0.53 -0.41 6.53 87.77 0.57 0.17 16 28 O -0.47 -1.08 13.94 -2.88 -0.04 -1.12 16 29 H 0.09 -0.11 7.45 -2.38 -0.02 -0.13 16 30 H 0.09 -0.41 8.14 -2.39 -0.02 -0.43 16 31 H 0.09 -0.34 8.14 -2.39 -0.02 -0.36 16 32 H 0.45 -4.08 8.96 -92.71 -0.83 -4.91 16 33 H 0.11 -1.43 8.14 -2.39 -0.02 -1.45 16 34 H 0.08 -0.75 8.14 -2.39 -0.02 -0.77 16 35 H 0.10 -1.05 8.14 -2.39 -0.02 -1.07 16 36 H 0.08 -0.48 6.12 -2.39 -0.01 -0.50 16 37 H 0.09 -0.33 7.58 -2.39 -0.02 -0.35 16 38 H 0.42 -4.53 8.60 -92.71 -0.80 -5.33 16 39 H 0.12 -1.01 8.14 -2.39 -0.02 -1.03 16 40 H 0.13 -1.19 8.14 -2.39 -0.02 -1.21 16 41 H 0.07 -0.02 7.61 -2.38 -0.02 -0.04 16 42 H 0.06 0.05 7.63 -2.39 -0.02 0.03 16 43 H 0.14 -0.06 6.30 -2.91 -0.02 -0.08 16 44 H 0.15 -0.58 4.90 -2.91 -0.01 -0.59 16 45 H 0.11 0.16 7.96 -2.38 -0.02 0.14 16 46 H 0.39 -2.76 8.70 -74.05 -0.64 -3.41 16 47 H -0.29 -1.20 7.11 99.48 0.71 -0.49 16 48 H -0.30 -1.88 7.11 99.48 0.71 -1.17 16 49 H 0.14 0.06 8.06 -2.91 -0.02 0.04 16 50 H 0.14 0.06 8.06 -2.91 -0.02 0.04 16 51 H 0.07 -0.08 6.11 -2.39 -0.01 -0.09 16 52 H 0.06 -0.01 8.14 -2.39 -0.02 -0.03 16 53 H 0.11 -0.97 8.14 -2.39 -0.02 -0.99 16 54 H 0.07 -0.32 8.14 -2.39 -0.02 -0.34 16 Total: 0.00 -26.83 433.42 -2.97 -29.81 By element: Atomic # 1 Polarization: -23.29 SS G_CDS: -1.25 Total: -24.54 kcal Atomic # 6 Polarization: 1.87 SS G_CDS: 6.48 Total: 8.36 kcal Atomic # 7 Polarization: 7.44 SS G_CDS: -7.25 Total: 0.20 kcal Atomic # 8 Polarization: -12.07 SS G_CDS: -3.00 Total: -15.08 kcal Atomic # 14 Polarization: -0.79 SS G_CDS: 2.04 Total: 1.25 kcal Total: -26.83 -2.97 -29.81 kcal The number of atoms in the molecule is 54 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17849352_4549602.mol2 54 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -88.629 kcal (2) G-P(sol) polarization free energy of solvation -26.833 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -115.463 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -2.975 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -29.808 kcal (6) G-S(sol) free energy of system = (1) + (5) -118.437 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.84 seconds