Wall clock time and date at job start Sun Mar 7 2021 15:09:52 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46503 * 1 3 3 C 1.33864 * 124.19279 * 2 1 4 4 O 1.21543 * 123.79115 * 359.97438 * 3 2 1 5 5 N 1.34668 * 112.41977 * 179.73157 * 3 2 1 6 6 C 1.46863 * 106.42728 * 0.26758 * 5 3 2 7 7 C 1.52473 * 110.48385 * 241.45766 * 6 5 3 8 8 C 1.53084 * 109.58133 * 178.66420 * 7 6 5 9 9 C 1.53015 * 109.41595 * 59.14793 * 8 7 6 10 10 N 1.46497 * 109.46622 * 179.51377 * 9 8 7 11 11 C 1.34779 * 119.99880 * 275.03759 * 10 9 8 12 12 O 1.21285 * 120.00053 * 359.97438 * 11 10 9 13 13 C 1.50703 * 119.99882 * 179.97438 * 11 10 9 14 14 O 1.42903 * 109.47143 * 180.02562 * 13 11 10 15 15 C 1.35895 * 117.00029 * 180.02562 * 14 13 11 16 16 C 1.38707 * 120.05339 * 179.97438 * 15 14 13 17 17 C 1.38169 * 119.94232 * 179.97438 * 16 15 14 18 18 C 1.50708 * 119.97240 * 180.02562 * 17 16 15 19 19 O 1.42896 * 109.46747 * 64.99719 * 18 17 16 20 20 Si 1.86295 * 109.47130 * 184.99887 * 18 17 16 21 21 C 1.38238 * 120.05526 * 0.02562 * 17 16 15 22 22 C 1.38285 * 120.11219 * 0.02562 * 21 17 16 23 23 C 1.38124 * 120.05698 * 359.68203 * 22 21 17 24 24 C 1.53009 * 109.50832 * 299.52605 * 9 8 7 25 25 C 1.52464 * 110.48644 * 118.54396 * 6 5 3 26 26 C 1.34916 * 124.19429 * 180.21711 * 2 1 3 27 27 O 1.21232 * 127.25588 * 359.97438 * 26 2 1 28 28 H 1.08994 * 109.47511 * 0.02959 * 1 2 3 29 29 H 1.09004 * 109.46960 * 120.02915 * 1 2 3 30 30 H 1.08998 * 109.47424 * 240.02515 * 1 2 3 31 31 H 0.97002 * 126.79300 * 180.24016 * 5 3 2 32 32 H 1.08992 * 109.45158 * 298.70119 * 7 6 5 33 33 H 1.08998 * 109.45308 * 58.63705 * 7 6 5 34 34 H 1.09000 * 109.47843 * 299.16959 * 8 7 6 35 35 H 1.08994 * 109.47895 * 179.12632 * 8 7 6 36 36 H 1.09006 * 109.46512 * 59.53493 * 9 8 7 37 37 H 0.96994 * 120.00101 * 95.03490 * 10 9 8 38 38 H 1.08996 * 109.46943 * 299.99883 * 13 11 10 39 39 H 1.08999 * 109.46829 * 59.99890 * 13 11 10 40 40 H 1.08002 * 120.03196 * 359.97438 * 16 15 14 41 41 H 1.08997 * 109.46781 * 305.00103 * 18 17 16 42 42 H 0.96698 * 113.99973 * 60.00411 * 19 18 17 43 43 H 1.48501 * 110.00001 * 179.97438 * 20 18 17 44 44 H 1.48496 * 110.00219 * 301.31947 * 20 18 17 45 45 H 1.08007 * 119.94444 * 180.02562 * 21 17 16 46 46 H 1.08009 * 119.97114 * 179.97438 * 22 21 17 47 47 H 1.07995 * 120.02700 * 180.31987 * 23 22 21 48 48 H 1.09003 * 109.47509 * 300.48655 * 24 9 8 49 49 H 1.09000 * 109.47793 * 180.45740 * 24 9 8 50 50 H 1.09000 * 109.45374 * 301.35477 * 25 6 5 51 51 H 1.08995 * 109.45306 * 61.29713 * 25 6 5 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 6 2.2173 1.1073 0.0000 4 8 1.7617 2.2341 -0.0005 5 7 3.5357 0.8325 0.0058 6 6 3.6548 -0.6313 0.0036 7 6 4.3723 -1.1101 1.2609 8 6 4.4557 -2.6387 1.2533 9 6 5.2128 -3.1007 0.0064 10 7 5.3033 -4.5628 0.0040 11 6 6.2958 -5.1777 0.6775 12 8 7.1142 -4.5204 1.2851 13 6 6.3886 -6.6818 0.6755 14 8 7.5152 -7.0906 1.4537 15 6 7.7435 -8.4265 1.5544 16 6 8.8201 -8.8934 2.2939 17 6 9.0497 -10.2521 2.3952 18 6 10.2189 -10.7603 3.1990 19 8 10.0294 -10.4299 4.5763 20 14 10.3418 -12.6100 3.0152 21 6 8.2079 -11.1458 1.7599 22 6 7.1346 -10.6828 1.0211 23 6 6.8972 -9.3257 0.9217 24 6 4.4679 -2.6339 -1.2459 25 6 4.3844 -1.1053 -1.2485 26 6 2.2233 -1.1159 -0.0042 27 8 1.8376 -2.2653 -0.0082 28 1 -0.3634 1.0276 -0.0005 29 1 -0.3633 -0.5143 -0.8898 30 1 -0.3634 -0.5134 0.8902 31 1 4.2629 1.4744 0.0102 32 1 5.3784 -0.6918 1.2862 33 1 3.8204 -0.7812 2.1413 34 1 3.4494 -3.0575 1.2434 35 1 4.9824 -2.9784 2.1450 36 1 6.2162 -2.6747 0.0121 37 1 4.6490 -5.0884 -0.4822 38 1 5.4792 -7.1025 1.1045 39 1 6.5054 -7.0372 -0.3483 40 1 9.4783 -8.1956 2.7902 41 1 11.1370 -10.2973 2.8373 42 1 9.2295 -10.8091 4.9653 43 1 11.4914 -13.1234 3.8027 44 1 9.0838 -13.2509 3.4753 45 1 8.3889 -12.2076 1.8406 46 1 6.4786 -11.3830 0.5253 47 1 6.0558 -8.9648 0.3490 48 1 3.4616 -3.0529 -1.2476 49 1 5.0033 -2.9701 -2.1338 50 1 3.8410 -0.7730 -2.1330 51 1 5.3907 -0.6869 -1.2625 There are 72 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 72 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_17849352_4860298.mol2 51 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 15:09:52 Heat of formation + Delta-G solvation = -108.776674 kcal Electronic energy + Delta-G solvation = -36089.161173 eV Core-core repulsion = 31149.599775 eV Total energy + Delta-G solvation = -4939.561399 eV No. of doubly occupied orbitals = 72 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 390.172 amu Computer time = 1.50 seconds Orbital eigenvalues (eV) -43.86785 -41.58602 -40.85040 -40.03779 -39.15289 -38.61456 -37.37996 -37.21113 -35.99553 -34.20317 -32.49029 -32.13786 -31.73895 -30.33500 -29.06327 -28.47344 -26.79921 -25.12327 -24.14038 -23.67743 -23.32273 -22.71198 -22.24257 -21.48610 -20.59684 -19.33987 -19.16399 -18.57535 -18.05335 -17.94720 -17.55320 -17.40947 -17.31232 -17.07619 -16.75922 -16.65184 -16.55994 -16.21891 -15.93762 -15.76376 -15.52017 -15.26821 -14.99282 -14.96414 -14.71007 -14.34350 -14.26401 -14.13402 -13.96583 -13.85056 -13.71882 -13.54770 -13.47182 -13.38947 -13.01597 -12.88272 -12.59757 -12.31580 -12.24703 -12.08328 -12.01399 -11.96582 -11.82961 -11.58685 -10.98347 -10.93990 -10.90948 -10.66050 -10.52332 -10.17178 -9.93826 -9.27917 -4.90504 0.21235 0.40042 0.44690 1.12603 1.28130 1.45026 1.51048 1.61733 1.82787 1.96896 2.01610 2.58245 2.67090 2.78145 3.32647 3.39386 3.41377 3.55579 3.67112 3.71769 3.85294 3.91629 3.94968 4.02037 4.09653 4.11143 4.13630 4.16756 4.25364 4.34234 4.36906 4.37439 4.42117 4.46966 4.54061 4.54680 4.57426 4.66282 4.71612 4.78918 4.88240 4.97244 4.98988 5.02287 5.14933 5.19283 5.25288 5.37790 5.42362 5.45795 5.70256 5.72273 5.89288 6.26671 6.28883 6.46435 6.48006 6.98739 7.13008 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.078 3.922 2 N -0.584 5.584 3 C 0.699 3.301 4 O -0.580 6.580 5 N -0.702 5.702 6 C 0.128 3.872 7 C -0.106 4.106 8 C -0.132 4.132 9 C 0.151 3.849 10 N -0.705 5.705 11 C 0.515 3.485 12 O -0.568 6.568 13 C 0.036 3.964 14 O -0.322 6.322 15 C 0.114 3.886 16 C -0.149 4.149 17 C -0.081 4.081 18 C -0.094 4.094 19 O -0.551 6.551 20 Si 0.785 3.215 21 C -0.159 4.159 22 C -0.071 4.071 23 C -0.202 4.202 24 C -0.125 4.125 25 C -0.106 4.106 26 C 0.530 3.470 27 O -0.469 6.469 28 H 0.093 0.907 29 H 0.091 0.909 30 H 0.087 0.913 31 H 0.452 0.548 32 H 0.105 0.895 33 H 0.073 0.927 34 H 0.078 0.922 35 H 0.060 0.940 36 H 0.083 0.917 37 H 0.420 0.580 38 H 0.121 0.879 39 H 0.127 0.873 40 H 0.113 0.887 41 H 0.119 0.881 42 H 0.386 0.614 43 H -0.305 1.305 44 H -0.276 1.276 45 H 0.147 0.853 46 H 0.162 0.838 47 H 0.160 0.840 48 H 0.084 0.916 49 H 0.099 0.901 50 H 0.087 0.913 51 H 0.110 0.890 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -3.342 -5.025 -7.514 9.638 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.062 4.062 2 N -0.330 5.330 3 C 0.399 3.601 4 O -0.457 6.457 5 N -0.366 5.366 6 C 0.037 3.963 7 C -0.145 4.145 8 C -0.172 4.172 9 C 0.046 3.954 10 N -0.359 5.359 11 C 0.301 3.699 12 O -0.446 6.446 13 C -0.042 4.042 14 O -0.235 6.235 15 C 0.069 3.931 16 C -0.167 4.167 17 C -0.082 4.082 18 C -0.202 4.202 19 O -0.359 6.359 20 Si 0.689 3.311 21 C -0.176 4.176 22 C -0.089 4.089 23 C -0.220 4.220 24 C -0.164 4.164 25 C -0.145 4.145 26 C 0.317 3.683 27 O -0.339 6.339 28 H 0.112 0.888 29 H 0.109 0.891 30 H 0.105 0.895 31 H 0.299 0.701 32 H 0.123 0.877 33 H 0.092 0.908 34 H 0.096 0.904 35 H 0.079 0.921 36 H 0.101 0.899 37 H 0.257 0.743 38 H 0.139 0.861 39 H 0.145 0.855 40 H 0.131 0.869 41 H 0.137 0.863 42 H 0.235 0.765 43 H -0.234 1.234 44 H -0.202 1.202 45 H 0.164 0.836 46 H 0.179 0.821 47 H 0.178 0.822 48 H 0.102 0.898 49 H 0.117 0.883 50 H 0.105 0.895 51 H 0.128 0.872 Dipole moment (debyes) X Y Z Total from point charges -2.698 -4.862 -6.703 8.709 hybrid contribution -0.770 0.907 1.155 1.658 sum -3.467 -3.955 -5.549 7.645 Atomic orbital electron populations 1.22040 0.74122 1.05381 1.04663 1.46453 1.10424 1.07884 1.68254 1.16096 0.83043 0.83777 0.77163 1.91020 1.76014 1.21838 1.56806 1.45554 1.05919 1.07539 1.77630 1.21203 0.93512 0.80905 1.00677 1.21595 1.02359 0.96068 0.94432 1.21969 1.01913 0.94651 0.98623 1.20974 1.00049 0.79287 0.95063 1.45722 1.29858 1.07745 1.52558 1.20477 0.80954 0.89942 0.78546 1.90763 1.42128 1.67698 1.44054 1.22742 0.90378 0.91972 0.99097 1.86121 1.47597 1.20947 1.68844 1.19191 0.95362 0.82098 0.96453 1.20304 0.98509 0.95688 1.02249 1.20116 0.97317 0.92538 0.98228 1.25458 0.98669 1.14432 0.81633 1.86583 1.49087 1.76409 1.23843 0.93846 0.76945 0.70637 0.89650 1.21244 0.96380 0.99881 1.00145 1.21324 0.96390 0.95094 0.96053 1.21634 1.01877 0.94046 1.04470 1.21866 1.02377 0.94688 0.97426 1.21651 1.02592 0.96109 0.94145 1.20934 0.88747 0.84585 0.74010 1.90746 1.79363 1.17927 1.45847 0.88812 0.89073 0.89472 0.70093 0.87680 0.90822 0.90372 0.92130 0.89914 0.74284 0.86128 0.85548 0.86934 0.86319 0.76465 1.23378 1.20189 0.83557 0.82088 0.82241 0.89792 0.88252 0.89457 0.87160 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.08 -0.19 10.89 127.77 1.39 1.20 16 2 N -0.58 -0.36 3.01 -796.76 -2.40 -2.76 16 3 C 0.70 2.13 8.63 179.37 1.55 3.68 16 4 O -0.58 -6.45 17.24 -3.85 -0.07 -6.52 16 5 N -0.70 2.94 5.88 -442.69 -2.60 0.34 16 6 C 0.13 -0.68 1.01 2.58 0.00 -0.68 16 7 C -0.11 0.52 5.10 30.45 0.16 0.68 16 8 C -0.13 0.32 5.25 30.63 0.16 0.48 16 9 C 0.15 -0.70 2.44 45.00 0.11 -0.59 16 10 N -0.71 3.90 5.08 -442.48 -2.25 1.66 16 11 C 0.51 0.73 7.87 87.66 0.69 1.42 16 12 O -0.57 -7.08 16.16 15.99 0.26 -6.82 16 13 C 0.04 -0.13 5.22 71.24 0.37 0.25 16 14 O -0.32 -2.01 9.67 -73.34 -0.71 -2.72 16 15 C 0.11 0.44 6.69 22.50 0.15 0.59 16 16 C -0.15 -0.90 9.62 22.37 0.22 -0.69 16 17 C -0.08 -0.15 5.35 -19.88 -0.11 -0.26 16 18 C -0.09 -0.13 2.80 71.24 0.20 0.07 16 19 O -0.55 -2.91 12.83 -148.98 -1.91 -4.83 16 20 Si 0.78 -1.63 29.88 68.60 2.05 0.42 16 21 C -0.16 0.36 8.67 22.28 0.19 0.55 16 22 C -0.07 0.31 10.04 22.25 0.22 0.54 16 23 C -0.20 0.60 9.04 22.37 0.20 0.80 16 24 C -0.13 1.08 5.14 30.62 0.16 1.24 16 25 C -0.11 0.95 5.10 30.44 0.16 1.11 16 26 C 0.53 -0.43 6.53 87.78 0.57 0.14 16 27 O -0.47 -0.86 13.94 -2.88 -0.04 -0.90 16 28 H 0.09 -0.12 7.45 -2.39 -0.02 -0.13 16 29 H 0.09 -0.45 8.14 -2.38 -0.02 -0.47 16 30 H 0.09 -0.36 8.14 -2.39 -0.02 -0.38 16 31 H 0.45 -3.75 8.96 -92.71 -0.83 -4.58 16 32 H 0.10 -0.77 8.14 -2.39 -0.02 -0.79 16 33 H 0.07 -0.25 8.14 -2.39 -0.02 -0.27 16 34 H 0.08 -0.06 6.11 -2.39 -0.01 -0.08 16 35 H 0.06 0.12 8.14 -2.39 -0.02 0.10 16 36 H 0.08 -0.14 7.58 -2.38 -0.02 -0.16 16 37 H 0.42 -5.02 8.60 -92.71 -0.80 -5.82 16 38 H 0.12 -1.11 7.65 -2.39 -0.02 -1.13 16 39 H 0.13 -1.29 7.67 -2.39 -0.02 -1.31 16 40 H 0.11 1.05 8.06 -2.91 -0.02 1.03 16 41 H 0.12 0.10 7.96 -2.39 -0.02 0.08 16 42 H 0.39 -0.34 8.70 -74.06 -0.64 -0.98 16 43 H -0.31 -1.82 7.11 99.48 0.71 -1.11 16 44 H -0.28 -0.13 7.01 99.48 0.70 0.57 16 45 H 0.15 -0.92 4.84 -2.91 -0.01 -0.94 16 46 H 0.16 -1.70 8.06 -2.91 -0.02 -1.72 16 47 H 0.16 -1.56 6.30 -2.91 -0.02 -1.58 16 48 H 0.08 -0.57 6.11 -2.39 -0.01 -0.58 16 49 H 0.10 -1.11 8.14 -2.39 -0.02 -1.13 16 50 H 0.09 -0.79 8.14 -2.39 -0.02 -0.81 16 51 H 0.11 -1.32 8.14 -2.39 -0.02 -1.34 16 Total: 0.00 -32.60 412.37 -2.50 -35.10 By element: Atomic # 1 Polarization: -22.28 SS G_CDS: -1.22 Total: -23.50 kcal Atomic # 6 Polarization: 4.14 SS G_CDS: 6.39 Total: 10.54 kcal Atomic # 7 Polarization: 6.48 SS G_CDS: -7.25 Total: -0.77 kcal Atomic # 8 Polarization: -19.31 SS G_CDS: -2.47 Total: -21.78 kcal Atomic # 14 Polarization: -1.63 SS G_CDS: 2.05 Total: 0.42 kcal Total: -32.60 -2.50 -35.10 kcal The number of atoms in the molecule is 51 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17849352_4860298.mol2 51 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -73.681 kcal (2) G-P(sol) polarization free energy of solvation -32.596 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -106.277 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -2.500 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -35.096 kcal (6) G-S(sol) free energy of system = (1) + (5) -108.777 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.50 seconds