Wall clock time and date at job start Sun Mar 7 2021 15:10:06 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46498 * 1 3 3 C 1.33861 * 124.19713 * 2 1 4 4 O 1.21542 * 123.78779 * 359.94869 * 3 2 1 5 5 N 1.34670 * 112.42472 * 179.69107 * 3 2 1 6 6 C 1.46846 * 106.41767 * 0.26893 * 5 3 2 7 7 C 1.52473 * 110.48681 * 241.43354 * 6 5 3 8 8 C 1.53087 * 109.51906 * 296.01705 * 7 6 5 9 9 C 1.52998 * 109.42027 * 300.83455 * 8 7 6 10 10 N 1.46502 * 109.45496 * 180.42921 * 9 8 7 11 11 C 1.34774 * 119.99916 * 84.90162 * 10 9 8 12 12 O 1.21695 * 120.00288 * 354.35686 * 11 10 9 13 13 C 1.46674 * 119.99812 * 174.35881 * 11 10 9 14 14 C 1.37896 * 126.22496 * 4.20014 * 13 11 10 15 15 C 1.39880 * 107.09011 * 180.02562 * 14 13 11 16 16 Br 1.89093 * 126.07030 * 180.02562 * 15 14 13 17 17 C 1.35505 * 107.85280 * 359.97438 * 15 14 13 18 18 C 1.50700 * 125.56526 * 180.02562 * 17 15 14 19 19 O 1.42898 * 109.46611 * 242.06631 * 18 17 15 20 20 Si 1.86304 * 109.47103 * 122.07181 * 18 17 15 21 21 N 1.35597 * 108.85707 * 359.72956 * 17 15 14 22 22 C 1.46503 * 125.67319 * 180.28396 * 21 17 15 23 23 C 1.53008 * 109.56782 * 60.39896 * 9 8 7 24 24 C 1.52480 * 110.48920 * 118.55337 * 6 5 3 25 25 C 1.34916 * 124.19579 * 180.16873 * 2 1 3 26 26 O 1.21235 * 127.25891 * 0.02562 * 25 2 1 27 27 H 1.09001 * 109.47109 * 0.03162 * 1 2 3 28 28 H 1.09006 * 109.47345 * 120.03005 * 1 2 3 29 29 H 1.09003 * 109.47276 * 240.02889 * 1 2 3 30 30 H 0.97004 * 126.78890 * 180.26630 * 5 3 2 31 31 H 1.09006 * 109.46454 * 56.03553 * 7 6 5 32 32 H 1.09005 * 109.46369 * 175.99731 * 7 6 5 33 33 H 1.09005 * 109.48014 * 180.85193 * 8 7 6 34 34 H 1.08999 * 109.48342 * 60.82101 * 8 7 6 35 35 H 1.09000 * 109.45144 * 300.36842 * 9 8 7 36 36 H 0.96996 * 119.99441 * 264.89832 * 10 9 8 37 37 H 1.07996 * 126.45002 * 0.02562 * 14 13 11 38 38 H 1.08991 * 109.47515 * 2.06853 * 18 17 15 39 39 H 0.96695 * 114.00606 * 299.99677 * 19 18 17 40 40 H 1.48497 * 109.99968 * 174.92544 * 20 18 17 41 41 H 1.48494 * 109.99790 * 296.24565 * 20 18 17 42 42 H 1.08994 * 109.47310 * 264.51080 * 22 21 17 43 43 H 1.08997 * 109.47001 * 24.51580 * 22 21 17 44 44 H 1.09006 * 109.46594 * 144.51235 * 22 21 17 45 45 H 1.08997 * 109.47724 * 179.61903 * 23 9 8 46 46 H 1.08995 * 109.48909 * 59.58122 * 23 9 8 47 47 H 1.08999 * 109.46425 * 183.99252 * 24 6 5 48 48 H 1.08994 * 109.46336 * 303.96680 * 24 6 5 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 6 2.2173 1.1072 0.0000 4 8 1.7617 2.2340 -0.0009 5 7 3.5357 0.8324 0.0067 6 6 3.6546 -0.6312 0.0051 7 6 4.3718 -1.1097 1.2626 8 6 5.8073 -0.5779 1.2666 9 6 6.5388 -1.0788 0.0197 10 7 7.9158 -0.5787 0.0279 11 6 8.8718 -1.2478 0.7022 12 8 8.5739 -2.2082 1.3877 13 6 10.2713 -0.8185 0.6099 14 6 10.7404 0.2927 -0.0585 15 6 12.1284 0.3196 0.1122 16 35 13.3108 1.6208 -0.5838 17 6 12.4751 -0.7519 0.8659 18 6 13.8763 -1.1077 1.2914 19 8 14.2325 -2.3781 0.7426 20 14 13.9587 -1.1894 3.1508 21 7 11.3545 -1.4478 1.1800 22 6 11.3054 -2.6688 1.9881 23 6 5.8206 -0.5738 -1.2334 24 6 4.3851 -1.1059 -1.2464 25 6 2.2232 -1.1159 -0.0033 26 8 1.8376 -2.2653 -0.0071 27 1 -0.3633 1.0277 -0.0006 28 1 -0.3634 -0.5143 -0.8898 29 1 -0.3634 -0.5134 0.8903 30 1 4.2629 1.4744 0.0116 31 1 3.8455 -0.7414 2.1433 32 1 4.3881 -2.1996 1.2790 33 1 6.3240 -0.9328 2.1583 34 1 5.7912 0.5120 1.2653 35 1 6.5488 -2.1688 0.0180 36 1 8.1393 0.2340 -0.4521 37 1 10.1476 1.0075 -0.6099 38 1 14.5697 -0.3485 0.9300 39 1 13.6567 -3.1029 1.0222 40 1 15.3009 -1.6581 3.5796 41 1 13.6787 0.1486 3.7308 42 1 11.3090 -3.5391 1.3320 43 1 12.1747 -2.7051 2.6446 44 1 10.3959 -2.6704 2.5890 45 1 6.3468 -0.9259 -2.1207 46 1 5.8042 0.5160 -1.2288 47 1 4.4018 -2.1956 -1.2658 48 1 3.8683 -0.7349 -2.1313 There are 70 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 70 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_17849352_5000100.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 15:10:06 Heat of formation + Delta-G solvation = -48.686899 kcal Electronic energy + Delta-G solvation = -35640.052101 eV Core-core repulsion = 30744.760809 eV Total energy + Delta-G solvation = -4895.291292 eV No. of doubly occupied orbitals = 70 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 441.078 amu Computer time = 1.49 seconds Orbital eigenvalues (eV) -43.82364 -42.85945 -40.73965 -39.84671 -39.06505 -37.89840 -37.06456 -36.00109 -34.57997 -33.90995 -32.20162 -32.08554 -31.02782 -30.12979 -28.83253 -27.33175 -26.95315 -25.06777 -24.13264 -23.67720 -22.81885 -21.76023 -21.48917 -21.14484 -20.41858 -19.13769 -18.88730 -18.14845 -17.95147 -17.63238 -17.38507 -17.08886 -16.75122 -16.65217 -16.55584 -16.11857 -16.03562 -15.59883 -15.42223 -15.31310 -15.30339 -14.68082 -14.41427 -14.35433 -14.32373 -14.26308 -14.20252 -13.78778 -13.67615 -13.56551 -13.41710 -13.32383 -13.20484 -13.02845 -12.91697 -12.39325 -12.30572 -12.02708 -11.92204 -11.88287 -11.61843 -11.37087 -11.20627 -10.98899 -10.96026 -10.84448 -10.52455 -10.15200 -9.77090 -9.26044 -5.21870 0.17998 0.44848 0.64126 0.92003 1.14677 1.19239 1.45843 1.53857 1.82615 1.85187 2.03279 2.21960 2.26803 2.81698 3.19178 3.33875 3.41682 3.43076 3.57325 3.72618 3.79053 3.91584 3.95817 4.00558 4.12940 4.19340 4.28797 4.34308 4.35283 4.37526 4.39833 4.43475 4.45602 4.56997 4.64865 4.66348 4.73878 4.75923 4.82267 4.92076 5.02340 5.04016 5.19528 5.22895 5.27934 5.46492 5.59917 5.73966 5.85662 5.90851 6.25857 6.43590 6.46180 7.01225 7.11417 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.078 3.922 2 N -0.584 5.584 3 C 0.700 3.300 4 O -0.579 6.579 5 N -0.696 5.696 6 C 0.131 3.869 7 C -0.106 4.106 8 C -0.120 4.120 9 C 0.149 3.851 10 N -0.700 5.700 11 C 0.595 3.405 12 O -0.564 6.564 13 C -0.041 4.041 14 C -0.107 4.107 15 C -0.182 4.182 16 Br -0.032 7.032 17 C 0.047 3.953 18 C -0.054 4.054 19 O -0.542 6.542 20 Si 0.749 3.251 21 N -0.394 5.394 22 C 0.052 3.948 23 C -0.116 4.116 24 C -0.107 4.107 25 C 0.529 3.471 26 O -0.485 6.485 27 H 0.096 0.904 28 H 0.088 0.912 29 H 0.086 0.914 30 H 0.450 0.550 31 H 0.076 0.924 32 H 0.092 0.908 33 H 0.069 0.931 34 H 0.082 0.918 35 H 0.084 0.916 36 H 0.416 0.584 37 H 0.178 0.822 38 H 0.125 0.875 39 H 0.390 0.610 40 H -0.267 1.267 41 H -0.283 1.283 42 H 0.107 0.893 43 H 0.108 0.892 44 H 0.111 0.889 45 H 0.096 0.904 46 H 0.091 0.909 47 H 0.096 0.904 48 H 0.087 0.913 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.090 -2.195 -0.046 2.197 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.063 4.063 2 N -0.330 5.330 3 C 0.401 3.599 4 O -0.456 6.456 5 N -0.362 5.362 6 C 0.041 3.959 7 C -0.145 4.145 8 C -0.159 4.159 9 C 0.045 3.955 10 N -0.351 5.351 11 C 0.383 3.617 12 O -0.444 6.444 13 C -0.156 4.156 14 C -0.133 4.133 15 C -0.268 4.268 16 Br 0.052 6.948 17 C -0.075 4.075 18 C -0.164 4.164 19 O -0.349 6.349 20 Si 0.650 3.350 21 N -0.067 5.067 22 C -0.087 4.087 23 C -0.154 4.154 24 C -0.146 4.146 25 C 0.316 3.684 26 O -0.356 6.356 27 H 0.114 0.886 28 H 0.107 0.893 29 H 0.105 0.895 30 H 0.298 0.702 31 H 0.095 0.905 32 H 0.111 0.889 33 H 0.088 0.912 34 H 0.101 0.899 35 H 0.102 0.898 36 H 0.254 0.746 37 H 0.196 0.804 38 H 0.142 0.858 39 H 0.239 0.761 40 H -0.193 1.193 41 H -0.209 1.209 42 H 0.125 0.875 43 H 0.125 0.875 44 H 0.130 0.870 45 H 0.115 0.885 46 H 0.110 0.890 47 H 0.115 0.885 48 H 0.105 0.895 Dipole moment (debyes) X Y Z Total from point charges 0.358 -2.169 0.812 2.344 hybrid contribution 0.164 0.903 -0.552 1.071 sum 0.523 -1.266 0.259 1.394 Atomic orbital electron populations 1.22040 0.74221 1.05442 1.04578 1.46455 1.10437 1.07965 1.68154 1.16058 0.83075 0.83625 0.77131 1.91022 1.76033 1.21736 1.56785 1.45522 1.05619 1.07435 1.77587 1.21155 0.92638 0.81217 1.00911 1.21608 0.95754 1.02848 0.94254 1.21850 0.93368 1.01906 0.98749 1.21065 0.79335 0.99918 0.95209 1.45554 1.07895 1.29114 1.52576 1.16831 0.83354 0.82254 0.79309 1.90823 1.83194 1.29306 1.41099 1.20107 0.88701 0.98639 1.08123 1.21509 0.92341 0.97850 1.01632 1.20986 0.95327 0.99862 1.10627 1.96664 1.60933 1.51893 1.85260 1.20753 0.89824 0.94692 1.02205 1.24959 0.90189 0.89103 1.12127 1.86593 1.57773 1.16209 1.74282 0.94488 0.84214 0.84745 0.71530 1.43878 1.04086 1.21265 1.37490 1.22761 1.06012 0.83831 0.96054 1.21766 0.93497 1.02635 0.97536 1.21647 0.95539 1.03168 0.94209 1.21042 0.89139 0.84414 0.73755 1.90820 1.79687 1.18647 1.46400 0.88563 0.89344 0.89503 0.70220 0.90518 0.88905 0.91247 0.89910 0.89776 0.74601 0.80421 0.85782 0.76068 1.19310 1.20907 0.87451 0.87478 0.87018 0.88506 0.89028 0.88527 0.89484 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.08 -0.14 10.89 127.77 1.39 1.26 16 2 N -0.58 -0.50 3.01 -796.77 -2.40 -2.90 16 3 C 0.70 1.44 8.63 179.37 1.55 2.99 16 4 O -0.58 -5.79 17.24 -3.85 -0.07 -5.85 16 5 N -0.70 4.05 5.23 -442.72 -2.31 1.73 16 6 C 0.13 -0.80 0.84 2.58 0.00 -0.80 16 7 C -0.11 0.71 4.98 30.45 0.15 0.86 16 8 C -0.12 1.01 5.38 30.62 0.16 1.18 16 9 C 0.15 -1.38 2.40 44.99 0.11 -1.27 16 10 N -0.70 6.13 5.06 -446.49 -2.26 3.87 16 11 C 0.59 -1.42 7.73 86.45 0.67 -0.75 16 12 O -0.56 -1.59 14.41 -4.33 -0.06 -1.65 16 13 C -0.04 0.08 6.89 40.36 0.28 0.36 16 14 C -0.11 0.26 10.34 22.59 0.23 0.49 16 15 C -0.18 -0.30 6.53 22.04 0.14 -0.16 16 16 Br -0.03 -0.09 33.05 -20.37 -0.67 -0.76 16 17 C 0.05 0.01 5.25 41.34 0.22 0.23 16 18 C -0.05 0.02 2.88 71.24 0.20 0.23 16 19 O -0.54 0.44 12.88 -148.98 -1.92 -1.47 16 20 Si 0.75 -1.91 29.48 68.60 2.02 0.11 16 21 N -0.39 0.96 3.10 -519.60 -1.61 -0.65 16 22 C 0.05 -0.43 8.84 127.77 1.13 0.70 16 23 C -0.12 1.51 5.28 30.63 0.16 1.67 16 24 C -0.11 1.01 4.98 30.45 0.15 1.16 16 25 C 0.53 0.20 6.95 87.77 0.61 0.81 16 26 O -0.49 -2.89 17.86 -2.89 -0.05 -2.94 16 27 H 0.10 -0.11 7.45 -2.39 -0.02 -0.13 16 28 H 0.09 -0.33 8.14 -2.38 -0.02 -0.35 16 29 H 0.09 -0.29 8.14 -2.39 -0.02 -0.31 16 30 H 0.45 -4.58 7.70 -92.71 -0.71 -5.29 16 31 H 0.08 -0.42 8.14 -2.38 -0.02 -0.44 16 32 H 0.09 -0.52 8.14 -2.38 -0.02 -0.54 16 33 H 0.07 -0.29 8.05 -2.38 -0.02 -0.31 16 34 H 0.08 -0.90 7.33 -2.39 -0.02 -0.92 16 35 H 0.08 -0.47 7.66 -2.39 -0.02 -0.49 16 36 H 0.42 -5.61 7.50 -92.71 -0.70 -6.31 16 37 H 0.18 -1.48 7.45 -2.91 -0.02 -1.50 16 38 H 0.12 0.24 6.94 -2.39 -0.02 0.22 16 39 H 0.39 -3.56 7.18 -74.06 -0.53 -4.09 16 40 H -0.27 -0.71 7.11 99.48 0.71 0.00 16 41 H -0.28 -1.15 7.11 99.48 0.71 -0.45 16 42 H 0.11 -1.16 8.14 -2.39 -0.02 -1.18 16 43 H 0.11 -1.42 3.92 -2.39 -0.01 -1.43 16 44 H 0.11 -0.70 6.57 -2.38 -0.02 -0.71 16 45 H 0.10 -1.33 8.14 -2.39 -0.02 -1.35 16 46 H 0.09 -1.45 7.33 -2.39 -0.02 -1.47 16 47 H 0.10 -0.84 8.14 -2.39 -0.02 -0.86 16 48 H 0.09 -0.81 8.14 -2.39 -0.02 -0.83 16 Total: 0.00 -27.31 404.54 -3.01 -30.31 By element: Atomic # 1 Polarization: -27.90 SS G_CDS: -0.84 Total: -28.74 kcal Atomic # 6 Polarization: 1.79 SS G_CDS: 7.16 Total: 8.95 kcal Atomic # 7 Polarization: 10.63 SS G_CDS: -8.58 Total: 2.05 kcal Atomic # 8 Polarization: -9.82 SS G_CDS: -2.10 Total: -11.92 kcal Atomic # 14 Polarization: -1.91 SS G_CDS: 2.02 Total: 0.11 kcal Atomic # 35 Polarization: -0.09 SS G_CDS: -0.67 Total: -0.76 kcal Total: -27.31 -3.01 -30.31 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17849352_5000100.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -18.375 kcal (2) G-P(sol) polarization free energy of solvation -27.306 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -45.681 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -3.006 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -30.312 kcal (6) G-S(sol) free energy of system = (1) + (5) -48.687 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.50 seconds