Wall clock time and date at job start Sun Mar 7 2021 15:10:15 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46503 * 1 3 3 C 1.33864 * 124.19279 * 2 1 4 4 O 1.21543 * 123.79115 * 359.97438 * 3 2 1 5 5 N 1.34668 * 112.41977 * 179.73157 * 3 2 1 6 6 C 1.46863 * 106.42728 * 0.26758 * 5 3 2 7 7 C 1.52473 * 110.48385 * 241.45766 * 6 5 3 8 8 C 1.53084 * 109.58133 * 178.66420 * 7 6 5 9 9 C 1.53015 * 109.41595 * 59.14793 * 8 7 6 10 10 N 1.46497 * 109.46622 * 179.51377 * 9 8 7 11 11 C 1.34779 * 119.99880 * 275.03759 * 10 9 8 12 12 O 1.21285 * 120.00053 * 359.97438 * 11 10 9 13 13 C 1.50703 * 119.99882 * 179.97438 * 11 10 9 14 14 O 1.42903 * 109.47143 * 180.02562 * 13 11 10 15 15 C 1.35915 * 117.00153 * 180.02562 * 14 13 11 16 16 C 1.38788 * 120.05996 * 179.97438 * 15 14 13 17 17 Br 1.89101 * 120.03282 * 0.02562 * 16 15 14 18 18 C 1.38228 * 119.92931 * 179.97438 * 16 15 14 19 19 C 1.38242 * 120.04627 * 359.97438 * 18 16 15 20 20 C 1.50705 * 119.94503 * 179.97438 * 19 18 16 21 21 O 1.42900 * 109.46684 * 64.99893 * 20 19 18 22 22 Si 1.86293 * 109.47332 * 185.00134 * 20 19 18 23 23 C 1.38279 * 120.12003 * 359.97438 * 19 18 16 24 24 C 1.38156 * 120.06739 * 359.77173 * 23 19 18 25 25 C 1.53009 * 109.50832 * 299.52605 * 9 8 7 26 26 C 1.52464 * 110.48644 * 118.54396 * 6 5 3 27 27 C 1.34916 * 124.19429 * 180.21711 * 2 1 3 28 28 O 1.21232 * 127.25588 * 359.97438 * 27 2 1 29 29 H 1.08994 * 109.47511 * 0.02959 * 1 2 3 30 30 H 1.09004 * 109.46960 * 120.02915 * 1 2 3 31 31 H 1.08998 * 109.47424 * 240.02515 * 1 2 3 32 32 H 0.97002 * 126.79300 * 180.24016 * 5 3 2 33 33 H 1.08992 * 109.45158 * 298.70119 * 7 6 5 34 34 H 1.08998 * 109.45308 * 58.63705 * 7 6 5 35 35 H 1.09000 * 109.47843 * 299.16959 * 8 7 6 36 36 H 1.08994 * 109.47895 * 179.12632 * 8 7 6 37 37 H 1.09006 * 109.46512 * 59.53493 * 9 8 7 38 38 H 0.96994 * 120.00101 * 95.03490 * 10 9 8 39 39 H 1.08996 * 109.46943 * 299.99883 * 13 11 10 40 40 H 1.08999 * 109.46829 * 59.99890 * 13 11 10 41 41 H 1.08003 * 119.98251 * 179.97438 * 18 16 15 42 42 H 1.09001 * 109.47171 * 305.00351 * 20 19 18 43 43 H 0.96701 * 114.00521 * 60.00658 * 21 20 19 44 44 H 1.48499 * 109.99876 * 180.02562 * 22 20 19 45 45 H 1.48505 * 109.99841 * 301.31694 * 22 20 19 46 46 H 1.07992 * 119.96998 * 180.02562 * 23 19 18 47 47 H 1.07999 * 120.02017 * 180.25339 * 24 23 19 48 48 H 1.09003 * 109.47509 * 300.48655 * 25 9 8 49 49 H 1.09000 * 109.47793 * 180.45740 * 25 9 8 50 50 H 1.09000 * 109.45374 * 301.35477 * 26 6 5 51 51 H 1.08995 * 109.45306 * 61.29713 * 26 6 5 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 6 2.2173 1.1073 0.0000 4 8 1.7617 2.2341 -0.0005 5 7 3.5357 0.8325 0.0058 6 6 3.6548 -0.6313 0.0036 7 6 4.3723 -1.1101 1.2609 8 6 4.4557 -2.6387 1.2533 9 6 5.2128 -3.1007 0.0064 10 7 5.3033 -4.5628 0.0040 11 6 6.2958 -5.1777 0.6775 12 8 7.1142 -4.5204 1.2851 13 6 6.3886 -6.6818 0.6755 14 8 7.5152 -7.0906 1.4537 15 6 7.7436 -8.4267 1.5544 16 6 8.8207 -8.8940 2.2944 17 35 9.9725 -7.6724 3.1645 18 6 9.0501 -10.2534 2.3955 19 6 8.2073 -11.1466 1.7607 20 6 8.4599 -12.6282 1.8720 21 8 8.2920 -13.0393 3.2302 22 14 7.2522 -13.5469 0.7912 23 6 7.1329 -10.6832 1.0239 24 6 6.8961 -9.3258 0.9239 25 6 4.4679 -2.6339 -1.2459 26 6 4.3844 -1.1053 -1.2485 27 6 2.2233 -1.1159 -0.0042 28 8 1.8376 -2.2653 -0.0082 29 1 -0.3634 1.0276 -0.0005 30 1 -0.3633 -0.5143 -0.8898 31 1 -0.3634 -0.5134 0.8902 32 1 4.2629 1.4744 0.0102 33 1 5.3784 -0.6918 1.2862 34 1 3.8204 -0.7812 2.1413 35 1 3.4494 -3.0575 1.2434 36 1 4.9824 -2.9784 2.1450 37 1 6.2162 -2.6747 0.0121 38 1 4.6490 -5.0884 -0.4822 39 1 5.4792 -7.1025 1.1045 40 1 6.5054 -7.0372 -0.3483 41 1 9.8883 -10.6180 2.9707 42 1 9.4773 -12.8486 1.5488 43 1 7.4080 -12.8732 3.5851 44 1 7.4905 -15.0092 0.8926 45 1 5.8606 -13.2300 1.2014 46 1 6.4759 -11.3832 0.5293 47 1 6.0543 -8.9648 0.3516 48 1 3.4616 -3.0529 -1.2476 49 1 5.0033 -2.9701 -2.1338 50 1 3.8410 -0.7730 -2.1330 51 1 5.3907 -0.6869 -1.2625 There are 75 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 75 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_17849352_6201210.mol2 51 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 15:10:15 Heat of formation + Delta-G solvation = -101.894832 kcal Electronic energy + Delta-G solvation = -38378.864284 eV Core-core repulsion = 33099.783302 eV Total energy + Delta-G solvation = -5279.080982 eV No. of doubly occupied orbitals = 75 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 468.082 amu Computer time = 1.87 seconds Orbital eigenvalues (eV) -43.85669 -41.67592 -40.88870 -40.03805 -39.24421 -38.62212 -37.36884 -37.19439 -35.97180 -34.18232 -33.58363 -32.11786 -31.95302 -30.80474 -30.22837 -29.08315 -28.62522 -26.34361 -25.14075 -24.14479 -23.99851 -23.11910 -22.56477 -22.30685 -21.52781 -20.59487 -19.56859 -19.15416 -18.61864 -18.21701 -18.04068 -17.57661 -17.46717 -17.28240 -17.03295 -16.66987 -16.55246 -16.38005 -16.16593 -15.90218 -15.73148 -15.64709 -15.44522 -15.02101 -14.96930 -14.70536 -14.47982 -14.35419 -14.25559 -13.90869 -13.78534 -13.73175 -13.69589 -13.58448 -13.52948 -13.40240 -12.86829 -12.39876 -12.29759 -12.23945 -12.20256 -12.12584 -11.96689 -11.87538 -11.80916 -11.68495 -11.22229 -10.94709 -10.92375 -10.89235 -10.59454 -10.51102 -10.12847 -9.95585 -9.31673 -4.88755 -0.04126 0.13269 0.45781 0.65517 1.13466 1.34150 1.44759 1.51256 1.62222 1.83608 2.01750 2.02632 2.40252 2.52607 2.78953 3.34071 3.41118 3.41824 3.53056 3.62262 3.73765 3.77547 3.83958 3.93166 3.97078 4.06039 4.12112 4.13165 4.13493 4.18934 4.34067 4.35970 4.38236 4.43060 4.48775 4.55446 4.59030 4.59749 4.66072 4.72366 4.80568 4.86585 4.89920 4.99526 5.01774 5.04447 5.17217 5.22211 5.24757 5.44831 5.50869 5.72976 5.90225 6.08471 6.27998 6.50223 6.51046 6.99459 7.18444 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.078 3.922 2 N -0.584 5.584 3 C 0.698 3.302 4 O -0.581 6.581 5 N -0.703 5.703 6 C 0.128 3.872 7 C -0.106 4.106 8 C -0.132 4.132 9 C 0.152 3.848 10 N -0.706 5.706 11 C 0.514 3.486 12 O -0.564 6.564 13 C 0.030 3.970 14 O -0.304 6.304 15 C 0.150 3.850 16 C -0.144 4.144 17 Br -0.054 7.054 18 C -0.035 4.035 19 C -0.149 4.149 20 C -0.084 4.084 21 O -0.551 6.551 22 Si 0.777 3.223 23 C -0.056 4.056 24 C -0.190 4.190 25 C -0.125 4.125 26 C -0.106 4.106 27 C 0.530 3.470 28 O -0.468 6.468 29 H 0.093 0.907 30 H 0.091 0.909 31 H 0.087 0.913 32 H 0.452 0.548 33 H 0.104 0.896 34 H 0.072 0.928 35 H 0.078 0.922 36 H 0.060 0.940 37 H 0.082 0.918 38 H 0.420 0.580 39 H 0.127 0.873 40 H 0.134 0.866 41 H 0.136 0.864 42 H 0.122 0.878 43 H 0.387 0.613 44 H -0.308 1.308 45 H -0.271 1.271 46 H 0.163 0.837 47 H 0.179 0.821 48 H 0.084 0.916 49 H 0.099 0.901 50 H 0.086 0.914 51 H 0.109 0.891 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -4.290 -3.286 -8.090 9.729 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.062 4.062 2 N -0.330 5.330 3 C 0.399 3.601 4 O -0.457 6.457 5 N -0.367 5.367 6 C 0.037 3.963 7 C -0.145 4.145 8 C -0.171 4.171 9 C 0.047 3.953 10 N -0.360 5.360 11 C 0.300 3.700 12 O -0.441 6.441 13 C -0.048 4.048 14 O -0.216 6.216 15 C 0.102 3.898 16 C -0.224 4.224 17 Br 0.031 6.969 18 C -0.055 4.055 19 C -0.151 4.151 20 C -0.192 4.192 21 O -0.359 6.359 22 Si 0.682 3.318 23 C -0.074 4.074 24 C -0.209 4.209 25 C -0.163 4.163 26 C -0.145 4.145 27 C 0.317 3.683 28 O -0.338 6.338 29 H 0.111 0.889 30 H 0.109 0.891 31 H 0.105 0.895 32 H 0.299 0.701 33 H 0.123 0.877 34 H 0.091 0.909 35 H 0.096 0.904 36 H 0.079 0.921 37 H 0.100 0.900 38 H 0.257 0.743 39 H 0.144 0.856 40 H 0.151 0.849 41 H 0.154 0.846 42 H 0.140 0.860 43 H 0.236 0.764 44 H -0.237 1.237 45 H -0.197 1.197 46 H 0.180 0.820 47 H 0.196 0.804 48 H 0.102 0.898 49 H 0.118 0.882 50 H 0.105 0.895 51 H 0.128 0.872 Dipole moment (debyes) X Y Z Total from point charges -3.758 -2.962 -7.349 8.770 hybrid contribution -0.561 0.191 1.265 1.397 sum -4.319 -2.771 -6.084 7.959 Atomic orbital electron populations 1.22039 0.74137 1.05364 1.04666 1.46455 1.10418 1.07900 1.68269 1.16101 0.83054 0.83780 0.77166 1.91020 1.76024 1.21860 1.56821 1.45561 1.05906 1.07588 1.77622 1.21210 0.93517 0.80861 1.00710 1.21597 1.02303 0.96211 0.94377 1.21966 1.01930 0.94518 0.98699 1.20945 0.99984 0.79407 0.94932 1.45707 1.29939 1.07642 1.52671 1.20434 0.81007 0.89902 0.78657 1.90787 1.41943 1.67613 1.43800 1.22880 0.90244 0.92251 0.99376 1.86246 1.47487 1.19605 1.68269 1.18802 0.93390 0.83218 0.94403 1.21269 0.99360 0.94285 1.07515 1.96759 1.62466 1.60058 1.77623 1.20886 0.98884 0.89231 0.96483 1.20275 0.97294 0.96176 1.01355 1.25315 1.11554 0.93131 0.89231 1.86594 1.37991 1.84790 1.26538 0.94095 0.75046 0.75854 0.86807 1.21290 0.95345 0.95697 0.95067 1.21559 1.01964 0.92890 1.04441 1.21864 1.02403 0.94572 0.97500 1.21652 1.02541 0.96238 0.94095 1.20933 0.88734 0.84584 0.74011 1.90745 1.79355 1.17887 1.45828 0.88851 0.89059 0.89470 0.70117 0.87740 0.90906 0.90376 0.92088 0.89952 0.74275 0.85557 0.84872 0.84596 0.85986 0.76416 1.23710 1.19682 0.81952 0.80390 0.89779 0.88229 0.89529 0.87217 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.08 -0.21 10.89 127.77 1.39 1.18 16 2 N -0.58 -0.17 3.01 -796.76 -2.40 -2.57 16 3 C 0.70 1.96 8.63 179.37 1.55 3.51 16 4 O -0.58 -6.35 17.24 -3.85 -0.07 -6.42 16 5 N -0.70 3.13 5.88 -442.69 -2.60 0.52 16 6 C 0.13 -0.73 1.01 2.58 0.00 -0.73 16 7 C -0.11 0.58 5.10 30.45 0.16 0.73 16 8 C -0.13 0.43 5.25 30.63 0.16 0.60 16 9 C 0.15 -0.87 2.44 45.00 0.11 -0.76 16 10 N -0.71 5.06 5.08 -442.48 -2.25 2.81 16 11 C 0.51 -0.33 7.87 87.66 0.69 0.36 16 12 O -0.56 -5.99 16.16 15.99 0.26 -5.73 16 13 C 0.03 -0.19 5.22 71.24 0.37 0.18 16 14 O -0.30 -1.01 9.00 -73.56 -0.66 -1.67 16 15 C 0.15 0.20 6.68 22.52 0.15 0.35 16 16 C -0.14 -0.70 6.24 22.40 0.14 -0.56 16 17 Br -0.05 -0.47 33.16 -20.37 -0.68 -1.15 16 18 C -0.03 -0.08 9.42 22.27 0.21 0.13 16 19 C -0.15 0.35 5.35 -19.85 -0.11 0.24 16 20 C -0.08 0.25 2.80 71.24 0.20 0.45 16 21 O -0.55 -0.63 12.83 -148.98 -1.91 -2.55 16 22 Si 0.78 -4.48 29.88 68.60 2.05 -2.43 16 23 C -0.06 0.36 8.66 22.26 0.19 0.55 16 24 C -0.19 1.17 9.04 22.36 0.20 1.37 16 25 C -0.13 1.19 5.14 30.62 0.16 1.34 16 26 C -0.11 1.01 5.10 30.44 0.16 1.17 16 27 C 0.53 -0.69 6.53 87.78 0.57 -0.12 16 28 O -0.47 -0.56 13.94 -2.88 -0.04 -0.60 16 29 H 0.09 -0.14 7.45 -2.39 -0.02 -0.15 16 30 H 0.09 -0.48 8.14 -2.38 -0.02 -0.50 16 31 H 0.09 -0.39 8.14 -2.39 -0.02 -0.41 16 32 H 0.45 -3.84 8.96 -92.71 -0.83 -4.67 16 33 H 0.10 -0.81 8.14 -2.39 -0.02 -0.82 16 34 H 0.07 -0.28 8.14 -2.39 -0.02 -0.30 16 35 H 0.08 -0.13 6.11 -2.39 -0.01 -0.14 16 36 H 0.06 0.07 8.14 -2.39 -0.02 0.05 16 37 H 0.08 -0.22 7.58 -2.38 -0.02 -0.23 16 38 H 0.42 -5.76 8.60 -92.71 -0.80 -6.55 16 39 H 0.13 -1.59 7.65 -2.39 -0.02 -1.61 16 40 H 0.13 -1.83 7.68 -2.39 -0.02 -1.85 16 41 H 0.14 0.35 8.06 -2.91 -0.02 0.33 16 42 H 0.12 -0.46 7.96 -2.39 -0.02 -0.48 16 43 H 0.39 -1.83 8.70 -74.06 -0.64 -2.47 16 44 H -0.31 -1.02 7.11 99.48 0.71 -0.31 16 45 H -0.27 1.02 7.01 99.48 0.70 1.71 16 46 H 0.16 -1.92 4.83 -2.91 -0.01 -1.93 16 47 H 0.18 -2.55 6.30 -2.91 -0.02 -2.57 16 48 H 0.08 -0.64 6.11 -2.39 -0.01 -0.66 16 49 H 0.10 -1.20 8.14 -2.39 -0.02 -1.22 16 50 H 0.09 -0.82 8.14 -2.39 -0.02 -0.84 16 51 H 0.11 -1.36 8.14 -2.39 -0.02 -1.37 16 Total: 0.00 -33.56 432.78 -3.19 -36.76 By element: Atomic # 1 Polarization: -25.79 SS G_CDS: -1.20 Total: -26.99 kcal Atomic # 6 Polarization: 3.70 SS G_CDS: 6.30 Total: 10.01 kcal Atomic # 7 Polarization: 8.02 SS G_CDS: -7.25 Total: 0.77 kcal Atomic # 8 Polarization: -14.55 SS G_CDS: -2.42 Total: -16.97 kcal Atomic # 14 Polarization: -4.48 SS G_CDS: 2.05 Total: -2.43 kcal Atomic # 35 Polarization: -0.47 SS G_CDS: -0.68 Total: -1.15 kcal Total: -33.56 -3.19 -36.76 kcal The number of atoms in the molecule is 51 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17849352_6201210.mol2 51 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -65.140 kcal (2) G-P(sol) polarization free energy of solvation -33.560 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -98.700 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -3.195 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -36.755 kcal (6) G-S(sol) free energy of system = (1) + (5) -101.895 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.87 seconds