Wall clock time and date at job start Sun Mar 7 2021 15:10:39 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46503 * 1 3 3 C 1.33864 * 124.19297 * 2 1 4 4 O 1.21543 * 123.79115 * 0.03179 * 3 2 1 5 5 N 1.34668 * 112.41977 * 179.76467 * 3 2 1 6 6 C 1.46862 * 106.42757 * 0.22691 * 5 3 2 7 7 C 1.52461 * 110.48834 * 241.45833 * 6 5 3 8 8 C 1.53083 * 109.58419 * 178.66514 * 7 6 5 9 9 C 1.53011 * 109.41838 * 59.14377 * 8 7 6 10 10 N 1.46499 * 109.46522 * 179.51622 * 9 8 7 11 11 C 1.34778 * 120.00316 * 275.04319 * 10 9 8 12 12 O 1.21637 * 119.99720 * 359.97438 * 11 10 9 13 13 C 1.47192 * 119.99821 * 179.97438 * 11 10 9 14 14 C 1.36002 * 123.46130 * 0.02562 * 13 11 10 15 15 S 1.70453 * 110.81625 * 179.97438 * 14 13 11 16 16 C 1.75505 * 92.44322 * 0.02562 * 15 14 13 17 17 C 1.50703 * 124.71100 * 179.97438 * 16 15 14 18 18 O 1.42897 * 109.46687 * 245.02127 * 17 16 15 19 19 Si 1.86295 * 109.47213 * 5.01714 * 17 16 15 20 20 C 1.32766 * 110.57458 * 359.73015 * 16 15 14 21 21 C 1.52997 * 109.50933 * 299.53128 * 9 8 7 22 22 C 1.52477 * 110.48719 * 118.54255 * 6 5 3 23 23 C 1.34915 * 124.19445 * 180.18243 * 2 1 3 24 24 O 1.21231 * 127.25540 * 359.97438 * 23 2 1 25 25 H 1.08994 * 109.47505 * 0.02919 * 1 2 3 26 26 H 1.09004 * 109.46708 * 120.03202 * 1 2 3 27 27 H 1.09001 * 109.47423 * 240.02362 * 1 2 3 28 28 H 0.97002 * 126.79302 * 180.22541 * 5 3 2 29 29 H 1.09001 * 109.45356 * 298.69746 * 7 6 5 30 30 H 1.08995 * 109.45664 * 58.62910 * 7 6 5 31 31 H 1.09000 * 109.47786 * 299.16452 * 8 7 6 32 32 H 1.08993 * 109.48162 * 179.13373 * 8 7 6 33 33 H 1.09005 * 109.46270 * 59.54186 * 9 8 7 34 34 H 0.97004 * 119.99756 * 95.03680 * 10 9 8 35 35 H 1.08003 * 124.59621 * 359.97438 * 14 13 11 36 36 H 1.08997 * 109.47070 * 125.01946 * 17 16 15 37 37 H 0.96693 * 114.00393 * 59.99972 * 18 17 16 38 38 H 1.48502 * 110.00328 * 180.02562 * 19 17 16 39 39 H 1.48498 * 110.00169 * 301.32526 * 19 17 16 40 40 H 1.08004 * 123.45965 * 180.23191 * 20 16 15 41 41 H 1.08992 * 109.48152 * 300.48271 * 21 9 8 42 42 H 1.09005 * 109.47720 * 180.45166 * 21 9 8 43 43 H 1.08997 * 109.45140 * 301.37437 * 22 6 5 44 44 H 1.09005 * 109.44254 * 61.29636 * 22 6 5 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 6 2.2173 1.1073 0.0000 4 8 1.7617 2.2341 0.0006 5 7 3.5357 0.8325 0.0051 6 6 3.6548 -0.6313 0.0033 7 6 4.3730 -1.1098 1.2602 8 6 4.4564 -2.6383 1.2531 9 6 5.2126 -3.1007 0.0059 10 7 5.3031 -4.5629 0.0040 11 6 6.2958 -5.1777 0.6771 12 8 7.1170 -4.5184 1.2858 13 6 6.3862 -6.6468 0.6755 14 6 5.5078 -7.4515 0.0194 15 16 5.9144 -9.0930 0.2326 16 6 7.3025 -8.6972 1.2310 17 6 8.2348 -9.7097 1.8447 18 8 8.1287 -9.6533 3.2686 19 14 7.7741 -11.4157 1.2549 20 6 7.4200 -7.3817 1.3662 21 6 4.4670 -2.6343 -1.2460 22 6 4.3836 -1.1058 -1.2491 23 6 2.2233 -1.1159 -0.0036 24 8 1.8376 -2.2652 -0.0068 25 1 -0.3634 1.0276 -0.0005 26 1 -0.3633 -0.5144 -0.8898 27 1 -0.3634 -0.5135 0.8902 28 1 4.2629 1.4744 0.0092 29 1 5.3793 -0.6915 1.2848 30 1 3.8218 -0.7804 2.1409 31 1 3.4501 -3.0571 1.2441 32 1 4.9835 -2.9777 2.1446 33 1 6.2160 -2.6749 0.0109 34 1 4.6483 -5.0887 -0.4817 35 1 4.6665 -7.0983 -0.5585 36 1 9.2596 -9.4870 1.5476 37 1 7.2418 -9.8415 3.6047 38 1 8.6858 -12.4236 1.8535 39 1 6.3686 -11.7191 1.6259 40 1 8.2061 -6.9096 1.9370 41 1 3.4608 -3.0532 -1.2470 42 1 5.0019 -2.9709 -2.1341 43 1 3.8398 -0.7736 -2.1334 44 1 5.3900 -0.6873 -1.2638 There are 64 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 64 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_17849352_6894386.mol2 44 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 15:10:39 Heat of formation + Delta-G solvation = -67.990893 kcal Electronic energy + Delta-G solvation = -30907.015352 eV Core-core repulsion = 26532.594615 eV Total energy + Delta-G solvation = -4374.420737 eV No. of doubly occupied orbitals = 64 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 366.113 amu Computer time = 0.97 seconds Orbital eigenvalues (eV) -43.87418 -41.18045 -40.03737 -39.11871 -38.59542 -37.28017 -37.02082 -35.98094 -34.19286 -32.29465 -31.91154 -29.72010 -29.04626 -26.98726 -25.96204 -24.79835 -24.26478 -23.17028 -22.59570 -21.89370 -20.88350 -20.26727 -19.17195 -19.07182 -18.11457 -18.03943 -17.92823 -17.51001 -17.06714 -16.69133 -16.51232 -16.42914 -16.14626 -15.88080 -15.67137 -15.49013 -15.11912 -15.02510 -14.62353 -14.41795 -14.25847 -14.06214 -13.94040 -13.83459 -13.67817 -13.61704 -13.58695 -13.48504 -12.95407 -12.67873 -12.47511 -12.41780 -12.28231 -11.94501 -11.83905 -11.78593 -10.94999 -10.92757 -10.88648 -10.74147 -10.57254 -10.17318 -10.03369 -9.53764 -5.13617 -0.38680 0.31507 0.47202 0.66095 0.88868 1.09728 1.15626 1.48372 1.84488 1.89707 1.91420 2.06458 2.35257 2.72430 3.20571 3.23389 3.25223 3.50698 3.58852 3.79797 3.80931 3.84983 3.92776 3.99542 4.05678 4.15332 4.24053 4.25403 4.33201 4.39344 4.41722 4.43515 4.45276 4.58914 4.64176 4.68850 4.69424 4.84360 4.86455 4.98937 5.04401 5.15120 5.19632 5.42075 5.64753 5.90186 6.24624 6.27406 6.43543 7.01346 7.19559 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.084 3.916 2 N -0.581 5.581 3 C 0.702 3.298 4 O -0.539 6.539 5 N -0.719 5.719 6 C 0.121 3.879 7 C -0.109 4.109 8 C -0.138 4.138 9 C 0.150 3.850 10 N -0.721 5.721 11 C 0.580 3.420 12 O -0.531 6.531 13 C -0.156 4.156 14 C -0.205 4.205 15 S 0.197 5.803 16 C -0.242 4.242 17 C -0.033 4.033 18 O -0.522 6.522 19 Si 0.649 3.351 20 C -0.052 4.052 21 C -0.136 4.136 22 C -0.107 4.107 23 C 0.532 3.468 24 O -0.455 6.455 25 H 0.098 0.902 26 H 0.079 0.921 27 H 0.079 0.921 28 H 0.442 0.558 29 H 0.091 0.909 30 H 0.078 0.922 31 H 0.084 0.916 32 H 0.080 0.920 33 H 0.093 0.907 34 H 0.400 0.600 35 H 0.172 0.828 36 H 0.128 0.872 37 H 0.378 0.622 38 H -0.234 1.234 39 H -0.238 1.238 40 H 0.156 0.844 41 H 0.088 0.912 42 H 0.083 0.917 43 H 0.081 0.919 44 H 0.092 0.908 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.102 -3.207 -4.538 5.665 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.057 4.057 2 N -0.327 5.327 3 C 0.402 3.598 4 O -0.412 6.412 5 N -0.383 5.383 6 C 0.030 3.970 7 C -0.148 4.148 8 C -0.177 4.177 9 C 0.046 3.954 10 N -0.372 5.372 11 C 0.366 3.634 12 O -0.408 6.408 13 C -0.174 4.174 14 C -0.344 4.344 15 S 0.464 5.536 16 C -0.359 4.359 17 C -0.145 4.145 18 O -0.329 6.329 19 Si 0.548 3.452 20 C -0.082 4.082 21 C -0.174 4.174 22 C -0.146 4.146 23 C 0.319 3.681 24 O -0.324 6.324 25 H 0.117 0.883 26 H 0.098 0.902 27 H 0.098 0.902 28 H 0.287 0.713 29 H 0.110 0.890 30 H 0.097 0.903 31 H 0.103 0.897 32 H 0.099 0.901 33 H 0.111 0.889 34 H 0.235 0.765 35 H 0.189 0.811 36 H 0.146 0.854 37 H 0.225 0.775 38 H -0.157 1.157 39 H -0.162 1.162 40 H 0.174 0.826 41 H 0.106 0.894 42 H 0.101 0.899 43 H 0.100 0.900 44 H 0.111 0.889 Dipole moment (debyes) X Y Z Total from point charges -1.373 -4.780 -4.426 6.657 hybrid contribution -0.130 1.940 1.171 2.269 sum -1.502 -2.840 -3.255 4.574 Atomic orbital electron populations 1.21910 0.74703 1.05387 1.03675 1.46347 1.09806 1.07984 1.68611 1.15943 0.82225 0.84182 0.77436 1.91050 1.75158 1.20274 1.54677 1.45600 1.06699 1.07068 1.78920 1.21178 0.94560 0.81445 0.99848 1.21619 1.01673 0.96819 0.94653 1.22067 1.02660 0.93862 0.99118 1.20945 1.00456 0.79537 0.94463 1.45844 1.30469 1.07409 1.53470 1.17605 0.80801 0.86424 0.78615 1.90821 1.40655 1.66359 1.43010 1.20253 0.98661 0.93843 1.04650 1.25812 1.04123 0.99598 1.04836 1.83177 1.21538 1.03457 1.45471 1.24740 1.03545 0.98797 1.08790 1.24401 1.01518 1.05442 0.83137 1.86645 1.35682 1.92189 1.18382 0.95267 0.81981 0.76058 0.91930 1.21056 0.98000 0.91522 0.97585 1.21936 1.02815 0.94665 0.97973 1.21592 1.01798 0.96230 0.95004 1.20647 0.88058 0.84914 0.74508 1.90756 1.78930 1.17535 1.45163 0.88294 0.90238 0.90246 0.71279 0.89023 0.90287 0.89747 0.90101 0.88855 0.76516 0.81096 0.85442 0.77451 1.15714 1.16238 0.82614 0.89372 0.89872 0.90018 0.88942 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.08 -0.10 10.89 59.85 0.65 0.55 16 2 N -0.58 -0.27 3.01 -128.24 -0.39 -0.65 16 3 C 0.70 1.09 8.63 -87.83 -0.76 0.33 16 4 O -0.54 -2.81 17.24 5.33 0.09 -2.72 16 5 N -0.72 1.23 5.88 -53.87 -0.32 0.91 16 6 C 0.12 -0.25 1.01 -133.10 -0.13 -0.38 16 7 C -0.11 0.23 5.10 -26.96 -0.14 0.10 16 8 C -0.14 0.12 5.25 -26.68 -0.14 -0.02 16 9 C 0.15 -0.22 2.44 -67.93 -0.17 -0.38 16 10 N -0.72 0.78 5.05 -54.95 -0.28 0.50 16 11 C 0.58 1.08 7.76 -12.62 -0.10 0.98 16 12 O -0.53 -2.91 16.46 5.24 0.09 -2.83 16 13 C -0.16 -0.10 5.98 -104.63 -0.63 -0.73 16 14 C -0.21 0.37 10.38 29.93 0.31 0.68 16 15 S 0.20 -0.39 20.20 -107.50 -2.17 -2.56 16 16 C -0.24 0.11 5.65 -36.18 -0.20 -0.10 16 17 C -0.03 0.03 2.94 36.01 0.11 0.13 16 18 O -0.52 -0.41 12.88 -35.23 -0.45 -0.86 16 19 Si 0.65 -1.10 30.92 -169.99 -5.26 -6.36 16 20 C -0.05 -0.06 9.95 -39.02 -0.39 -0.45 16 21 C -0.14 0.41 5.14 -26.69 -0.14 0.27 16 22 C -0.11 0.36 5.10 -26.96 -0.14 0.23 16 23 C 0.53 0.02 6.53 -10.71 -0.07 -0.05 16 24 O -0.46 -0.67 13.94 5.60 0.08 -0.60 16 25 H 0.10 -0.10 7.45 -51.93 -0.39 -0.48 16 26 H 0.08 -0.18 8.14 -51.93 -0.42 -0.60 16 27 H 0.08 -0.16 8.14 -51.93 -0.42 -0.58 16 28 H 0.44 -1.63 8.96 -40.82 -0.37 -1.99 16 29 H 0.09 -0.30 8.14 -51.93 -0.42 -0.72 16 30 H 0.08 -0.13 8.14 -51.93 -0.42 -0.55 16 31 H 0.08 0.01 6.11 -51.93 -0.32 -0.31 16 32 H 0.08 0.06 8.14 -51.93 -0.42 -0.36 16 33 H 0.09 -0.03 7.58 -51.93 -0.39 -0.43 16 34 H 0.40 -1.32 7.10 -40.82 -0.29 -1.61 16 35 H 0.17 -0.78 7.01 -52.48 -0.37 -1.15 16 36 H 0.13 -0.20 7.96 -51.93 -0.41 -0.61 16 37 H 0.38 -0.80 8.70 45.56 0.40 -0.41 16 38 H -0.23 -0.29 7.11 56.52 0.40 0.11 16 39 H -0.24 0.06 7.11 56.52 0.40 0.46 16 40 H 0.16 0.33 8.06 -52.48 -0.42 -0.09 16 41 H 0.09 -0.18 6.11 -51.93 -0.32 -0.50 16 42 H 0.08 -0.31 8.14 -51.93 -0.42 -0.74 16 43 H 0.08 -0.27 8.14 -51.93 -0.42 -0.69 16 44 H 0.09 -0.43 8.14 -51.93 -0.42 -0.85 16 LS Contribution 372.71 15.07 5.62 5.62 Total: 0.00 -10.12 372.71 -10.37 -20.50 By element: Atomic # 1 Polarization: -6.65 SS G_CDS: -5.46 Total: -12.11 kcal Atomic # 6 Polarization: 3.10 SS G_CDS: -1.93 Total: 1.17 kcal Atomic # 7 Polarization: 1.74 SS G_CDS: -0.98 Total: 0.76 kcal Atomic # 8 Polarization: -6.81 SS G_CDS: -0.20 Total: -7.01 kcal Atomic # 14 Polarization: -1.10 SS G_CDS: -5.26 Total: -6.36 kcal Atomic # 16 Polarization: -0.39 SS G_CDS: -2.17 Total: -2.56 kcal Total LS contribution 5.62 Total: 5.62 kcal Total: -10.12 -10.37 -20.50 kcal The number of atoms in the molecule is 44 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17849352_6894386.mol2 44 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -47.494 kcal (2) G-P(sol) polarization free energy of solvation -10.122 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -57.616 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.375 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.496 kcal (6) G-S(sol) free energy of system = (1) + (5) -67.991 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.97 seconds