Wall clock time and date at job start Sun Mar 7 2021 15:10:38 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46503 * 1 3 3 C 1.33864 * 124.19297 * 2 1 4 4 O 1.21543 * 123.79115 * 0.03179 * 3 2 1 5 5 N 1.34668 * 112.41977 * 179.76467 * 3 2 1 6 6 C 1.46862 * 106.42757 * 0.22691 * 5 3 2 7 7 C 1.52461 * 110.48834 * 241.45833 * 6 5 3 8 8 C 1.53083 * 109.58419 * 178.66514 * 7 6 5 9 9 C 1.53011 * 109.41838 * 59.14377 * 8 7 6 10 10 N 1.46499 * 109.46522 * 179.51622 * 9 8 7 11 11 C 1.34778 * 120.00316 * 275.04319 * 10 9 8 12 12 O 1.21637 * 119.99720 * 359.97438 * 11 10 9 13 13 C 1.47192 * 119.99821 * 179.97438 * 11 10 9 14 14 C 1.36002 * 123.46130 * 0.02562 * 13 11 10 15 15 S 1.70453 * 110.81625 * 179.97438 * 14 13 11 16 16 C 1.75505 * 92.44322 * 0.02562 * 15 14 13 17 17 C 1.50703 * 124.71100 * 179.97438 * 16 15 14 18 18 O 1.42897 * 109.46687 * 245.02127 * 17 16 15 19 19 Si 1.86295 * 109.47213 * 5.01714 * 17 16 15 20 20 C 1.32766 * 110.57458 * 359.73015 * 16 15 14 21 21 C 1.52997 * 109.50933 * 299.53128 * 9 8 7 22 22 C 1.52477 * 110.48719 * 118.54255 * 6 5 3 23 23 C 1.34915 * 124.19445 * 180.18243 * 2 1 3 24 24 O 1.21231 * 127.25540 * 359.97438 * 23 2 1 25 25 H 1.08994 * 109.47505 * 0.02919 * 1 2 3 26 26 H 1.09004 * 109.46708 * 120.03202 * 1 2 3 27 27 H 1.09001 * 109.47423 * 240.02362 * 1 2 3 28 28 H 0.97002 * 126.79302 * 180.22541 * 5 3 2 29 29 H 1.09001 * 109.45356 * 298.69746 * 7 6 5 30 30 H 1.08995 * 109.45664 * 58.62910 * 7 6 5 31 31 H 1.09000 * 109.47786 * 299.16452 * 8 7 6 32 32 H 1.08993 * 109.48162 * 179.13373 * 8 7 6 33 33 H 1.09005 * 109.46270 * 59.54186 * 9 8 7 34 34 H 0.97004 * 119.99756 * 95.03680 * 10 9 8 35 35 H 1.08003 * 124.59621 * 359.97438 * 14 13 11 36 36 H 1.08997 * 109.47070 * 125.01946 * 17 16 15 37 37 H 0.96693 * 114.00393 * 59.99972 * 18 17 16 38 38 H 1.48502 * 110.00328 * 180.02562 * 19 17 16 39 39 H 1.48498 * 110.00169 * 301.32526 * 19 17 16 40 40 H 1.08004 * 123.45965 * 180.23191 * 20 16 15 41 41 H 1.08992 * 109.48152 * 300.48271 * 21 9 8 42 42 H 1.09005 * 109.47720 * 180.45166 * 21 9 8 43 43 H 1.08997 * 109.45140 * 301.37437 * 22 6 5 44 44 H 1.09005 * 109.44254 * 61.29636 * 22 6 5 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 6 2.2173 1.1073 0.0000 4 8 1.7617 2.2341 0.0006 5 7 3.5357 0.8325 0.0051 6 6 3.6548 -0.6313 0.0033 7 6 4.3730 -1.1098 1.2602 8 6 4.4564 -2.6383 1.2531 9 6 5.2126 -3.1007 0.0059 10 7 5.3031 -4.5629 0.0040 11 6 6.2958 -5.1777 0.6771 12 8 7.1170 -4.5184 1.2858 13 6 6.3862 -6.6468 0.6755 14 6 5.5078 -7.4515 0.0194 15 16 5.9144 -9.0930 0.2326 16 6 7.3025 -8.6972 1.2310 17 6 8.2348 -9.7097 1.8447 18 8 8.1287 -9.6533 3.2686 19 14 7.7741 -11.4157 1.2549 20 6 7.4200 -7.3817 1.3662 21 6 4.4670 -2.6343 -1.2460 22 6 4.3836 -1.1058 -1.2491 23 6 2.2233 -1.1159 -0.0036 24 8 1.8376 -2.2652 -0.0068 25 1 -0.3634 1.0276 -0.0005 26 1 -0.3633 -0.5144 -0.8898 27 1 -0.3634 -0.5135 0.8902 28 1 4.2629 1.4744 0.0092 29 1 5.3793 -0.6915 1.2848 30 1 3.8218 -0.7804 2.1409 31 1 3.4501 -3.0571 1.2441 32 1 4.9835 -2.9777 2.1446 33 1 6.2160 -2.6749 0.0109 34 1 4.6483 -5.0887 -0.4817 35 1 4.6665 -7.0983 -0.5585 36 1 9.2596 -9.4870 1.5476 37 1 7.2418 -9.8415 3.6047 38 1 8.6858 -12.4236 1.8535 39 1 6.3686 -11.7191 1.6259 40 1 8.2061 -6.9096 1.9370 41 1 3.4608 -3.0532 -1.2470 42 1 5.0019 -2.9709 -2.1341 43 1 3.8398 -0.7736 -2.1334 44 1 5.3900 -0.6873 -1.2638 There are 64 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 64 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_17849352_6894386.mol2 44 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 15:10:38 Heat of formation + Delta-G solvation = -71.777750 kcal Electronic energy + Delta-G solvation = -30907.179562 eV Core-core repulsion = 26532.594615 eV Total energy + Delta-G solvation = -4374.584947 eV No. of doubly occupied orbitals = 64 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 366.113 amu Computer time = 1.12 seconds Orbital eigenvalues (eV) -43.86954 -41.22065 -40.10294 -39.09559 -38.59786 -37.33535 -37.09992 -35.99682 -34.18587 -32.13578 -31.86872 -29.67323 -28.98299 -26.94094 -25.95601 -24.78966 -24.11963 -23.12061 -22.54159 -21.89733 -20.86965 -20.24750 -19.16651 -19.00683 -18.11174 -18.04781 -17.90758 -17.49761 -17.04599 -16.67038 -16.56794 -16.41354 -16.15773 -15.89067 -15.69477 -15.47171 -15.10253 -14.98516 -14.56082 -14.34928 -14.21644 -14.03941 -13.86391 -13.75280 -13.62339 -13.53753 -13.51356 -13.40100 -12.90554 -12.61333 -12.42908 -12.31098 -12.22490 -11.99192 -11.82507 -11.80767 -11.00695 -10.94488 -10.91048 -10.73071 -10.52352 -10.19596 -9.97527 -9.43951 -5.02897 -0.31773 0.41054 0.44502 0.71862 0.84665 1.12767 1.23598 1.56395 1.82514 1.91619 1.98818 2.11785 2.29271 2.77147 3.31131 3.34919 3.39782 3.60635 3.71606 3.88711 3.93268 3.96485 4.02173 4.11344 4.17071 4.30749 4.34580 4.36985 4.41978 4.48030 4.51198 4.54169 4.57609 4.71144 4.73479 4.79222 4.88298 4.97274 5.01711 5.02782 5.14454 5.18660 5.22369 5.46588 5.72344 5.89015 6.26814 6.41169 6.48773 6.98705 7.16960 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.078 3.922 2 N -0.584 5.584 3 C 0.699 3.301 4 O -0.580 6.580 5 N -0.702 5.702 6 C 0.128 3.872 7 C -0.105 4.105 8 C -0.132 4.132 9 C 0.150 3.850 10 N -0.707 5.707 11 C 0.577 3.423 12 O -0.579 6.579 13 C -0.182 4.182 14 C -0.191 4.191 15 S 0.244 5.756 16 C -0.246 4.246 17 C -0.046 4.046 18 O -0.545 6.545 19 Si 0.728 3.272 20 C -0.074 4.074 21 C -0.126 4.126 22 C -0.105 4.105 23 C 0.529 3.471 24 O -0.470 6.470 25 H 0.094 0.906 26 H 0.090 0.910 27 H 0.086 0.914 28 H 0.452 0.548 29 H 0.106 0.894 30 H 0.073 0.927 31 H 0.075 0.925 32 H 0.060 0.940 33 H 0.085 0.915 34 H 0.412 0.588 35 H 0.202 0.798 36 H 0.130 0.870 37 H 0.388 0.612 38 H -0.277 1.277 39 H -0.251 1.251 40 H 0.134 0.866 41 H 0.082 0.918 42 H 0.098 0.902 43 H 0.087 0.913 44 H 0.111 0.889 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.765 -4.005 -6.167 7.562 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.062 4.062 2 N -0.331 5.331 3 C 0.399 3.601 4 O -0.457 6.457 5 N -0.366 5.366 6 C 0.037 3.963 7 C -0.144 4.144 8 C -0.171 4.171 9 C 0.046 3.954 10 N -0.358 5.358 11 C 0.364 3.636 12 O -0.460 6.460 13 C -0.200 4.200 14 C -0.329 4.329 15 S 0.511 5.489 16 C -0.363 4.363 17 C -0.157 4.157 18 O -0.353 6.353 19 Si 0.629 3.371 20 C -0.103 4.103 21 C -0.165 4.165 22 C -0.144 4.144 23 C 0.317 3.683 24 O -0.339 6.339 25 H 0.112 0.888 26 H 0.109 0.891 27 H 0.105 0.895 28 H 0.299 0.701 29 H 0.125 0.875 30 H 0.092 0.908 31 H 0.094 0.906 32 H 0.079 0.921 33 H 0.103 0.897 34 H 0.250 0.750 35 H 0.219 0.781 36 H 0.147 0.853 37 H 0.237 0.763 38 H -0.203 1.203 39 H -0.176 1.176 40 H 0.152 0.848 41 H 0.101 0.899 42 H 0.116 0.884 43 H 0.105 0.895 44 H 0.130 0.870 Dipole moment (debyes) X Y Z Total from point charges -2.049 -5.579 -6.081 8.503 hybrid contribution 0.059 2.100 1.711 2.710 sum -1.990 -3.479 -4.369 5.929 Atomic orbital electron populations 1.22041 0.74131 1.05395 1.04648 1.46460 1.10432 1.07894 1.68267 1.16090 0.83044 0.83759 0.77158 1.91019 1.76017 1.21822 1.56828 1.45547 1.05914 1.07509 1.77615 1.21200 0.93478 0.80913 1.00703 1.21593 1.02432 0.95944 0.94409 1.21958 1.01787 0.94693 0.98633 1.20982 1.00130 0.79252 0.95040 1.45764 1.29800 1.07772 1.52491 1.17851 0.80646 0.86944 0.78137 1.90788 1.42579 1.67354 1.45240 1.20140 0.99851 0.93407 1.06569 1.26169 1.03808 0.99615 1.03319 1.83030 1.19572 1.02579 1.43755 1.24808 1.04316 0.98231 1.08895 1.24707 1.01963 1.06481 0.82519 1.86610 1.36808 1.92462 1.19437 0.94408 0.79316 0.72835 0.90568 1.20999 0.98371 0.92385 0.98560 1.21867 1.02280 0.94835 0.97471 1.21646 1.02667 0.95944 0.94142 1.20949 0.88787 0.84579 0.74007 1.90748 1.79375 1.17977 1.45843 0.88766 0.89093 0.89494 0.70058 0.87511 0.90784 0.90617 0.92109 0.89714 0.75035 0.78066 0.85256 0.76260 1.20294 1.17578 0.84838 0.89949 0.88375 0.89457 0.87033 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.08 -0.15 10.89 127.77 1.39 1.24 16 2 N -0.58 -0.66 3.01 -796.76 -2.40 -3.06 16 3 C 0.70 2.39 8.63 179.37 1.55 3.93 16 4 O -0.58 -6.62 17.24 -3.85 -0.07 -6.68 16 5 N -0.70 2.70 5.88 -442.69 -2.60 0.10 16 6 C 0.13 -0.60 1.01 2.58 0.00 -0.60 16 7 C -0.10 0.46 5.10 30.44 0.16 0.62 16 8 C -0.13 0.16 5.25 30.63 0.16 0.33 16 9 C 0.15 -0.46 2.44 44.99 0.11 -0.35 16 10 N -0.71 1.61 5.05 -446.00 -2.25 -0.64 16 11 C 0.58 2.74 7.76 86.60 0.67 3.41 16 12 O -0.58 -7.65 16.46 -4.15 -0.07 -7.71 16 13 C -0.18 -0.31 5.98 -19.87 -0.12 -0.43 16 14 C -0.19 0.96 10.38 67.30 0.70 1.66 16 15 S 0.24 -1.35 20.20 -56.49 -1.14 -2.49 16 16 C -0.25 0.15 5.65 24.51 0.14 0.29 16 17 C -0.05 0.05 2.94 71.24 0.21 0.26 16 18 O -0.54 -1.45 12.88 -148.98 -1.92 -3.37 16 19 Si 0.73 -2.69 30.92 68.60 2.12 -0.57 16 20 C -0.07 -0.28 9.95 22.67 0.23 -0.06 16 21 C -0.13 0.92 5.14 30.62 0.16 1.08 16 22 C -0.11 0.87 5.10 30.45 0.16 1.03 16 23 C 0.53 -0.07 6.53 87.78 0.57 0.51 16 24 O -0.47 -1.29 13.94 -2.88 -0.04 -1.33 16 25 H 0.09 -0.08 7.45 -2.39 -0.02 -0.10 16 26 H 0.09 -0.40 8.14 -2.38 -0.02 -0.42 16 27 H 0.09 -0.32 8.14 -2.39 -0.02 -0.34 16 28 H 0.45 -3.66 8.96 -92.71 -0.83 -4.49 16 29 H 0.11 -0.76 8.14 -2.39 -0.02 -0.78 16 30 H 0.07 -0.22 8.14 -2.39 -0.02 -0.24 16 31 H 0.08 0.05 6.11 -2.39 -0.01 0.04 16 32 H 0.06 0.19 8.14 -2.39 -0.02 0.17 16 33 H 0.08 -0.05 7.58 -2.38 -0.02 -0.07 16 34 H 0.41 -3.21 7.10 -92.71 -0.66 -3.87 16 35 H 0.20 -2.42 7.01 -2.91 -0.02 -2.44 16 36 H 0.13 -0.27 7.96 -2.39 -0.02 -0.29 16 37 H 0.39 -1.34 8.70 -74.06 -0.64 -1.99 16 38 H -0.28 -0.95 7.11 99.48 0.71 -0.24 16 39 H -0.25 0.42 7.11 99.48 0.71 1.12 16 40 H 0.13 1.01 8.06 -2.91 -0.02 0.99 16 41 H 0.08 -0.44 6.11 -2.39 -0.01 -0.46 16 42 H 0.10 -0.95 8.14 -2.38 -0.02 -0.97 16 43 H 0.09 -0.74 8.14 -2.39 -0.02 -0.76 16 44 H 0.11 -1.28 8.14 -2.38 -0.02 -1.30 16 Total: 0.00 -25.98 372.71 -3.29 -29.27 By element: Atomic # 1 Polarization: -15.42 SS G_CDS: -1.00 Total: -16.42 kcal Atomic # 6 Polarization: 6.83 SS G_CDS: 6.08 Total: 12.90 kcal Atomic # 7 Polarization: 3.65 SS G_CDS: -7.25 Total: -3.60 kcal Atomic # 8 Polarization: -17.00 SS G_CDS: -2.09 Total: -19.09 kcal Atomic # 14 Polarization: -2.69 SS G_CDS: 2.12 Total: -0.57 kcal Atomic # 16 Polarization: -1.35 SS G_CDS: -1.14 Total: -2.49 kcal Total: -25.98 -3.29 -29.27 kcal The number of atoms in the molecule is 44 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17849352_6894386.mol2 44 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -42.508 kcal (2) G-P(sol) polarization free energy of solvation -25.979 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -68.487 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -3.291 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -29.270 kcal (6) G-S(sol) free energy of system = (1) + (5) -71.778 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.12 seconds