Wall clock time and date at job start Sun Mar 7 2021 08:24:22 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.17398 * 1 3 3 C 1.47203 * 179.97438 * 2 1 4 4 H 1.09001 * 109.47194 * 180.44099 * 3 2 1 5 5 C 1.52997 * 109.47240 * 300.44680 * 3 2 1 6 6 C 1.53002 * 109.46817 * 180.02562 * 5 3 2 7 7 C 1.52996 * 109.46972 * 299.99733 * 6 5 3 8 8 H 1.09000 * 109.47380 * 299.99696 * 7 6 5 9 9 C 1.53002 * 109.46969 * 180.02562 * 7 6 5 10 10 N 1.46504 * 109.47165 * 174.99907 * 9 7 6 11 11 C 1.34782 * 119.99678 * 179.97438 * 10 9 7 12 12 O 1.21689 * 120.00134 * 0.02562 * 11 10 9 13 13 C 1.46424 * 119.99639 * 180.02562 * 11 10 9 14 14 C 1.34809 * 119.99933 * 179.97438 * 13 11 10 15 15 C 1.47216 * 119.99948 * 180.02562 * 14 13 11 16 16 C 1.39836 * 120.16621 * 359.72400 * 15 14 13 17 17 C 1.37895 * 119.82150 * 179.79113 * 16 15 14 18 18 C 1.38402 * 120.16920 * 0.46468 * 17 16 15 19 19 C 1.50701 * 119.82736 * 179.76539 * 18 17 16 20 20 O 1.42898 * 109.47212 * 245.02445 * 19 18 17 21 21 Si 1.86303 * 109.46968 * 5.02144 * 19 18 17 22 22 C 1.38400 * 120.34559 * 359.78785 * 18 17 16 23 23 C 1.37886 * 120.17103 * 359.97438 * 22 18 17 24 24 C 1.52997 * 109.47131 * 60.00459 * 7 6 5 25 25 C 1.52999 * 109.46991 * 299.99311 * 24 7 6 26 26 H 4.18748 * 15.03845 * 0.02562 * 4 2 1 27 27 H 1.09002 * 109.47153 * 299.99895 * 5 3 2 28 28 H 1.08996 * 109.46952 * 60.00066 * 5 3 2 29 29 H 1.08996 * 109.47407 * 60.00219 * 6 5 3 30 30 H 1.09000 * 109.46986 * 179.97438 * 6 5 3 31 31 H 1.09000 * 109.47173 * 295.00133 * 9 7 6 32 32 H 1.09002 * 109.47125 * 55.00194 * 9 7 6 33 33 H 0.96994 * 120.00002 * 0.02562 * 10 9 7 34 34 H 1.08001 * 120.00216 * 0.02562 * 13 11 10 35 35 H 1.07996 * 120.00313 * 0.02562 * 14 13 11 36 36 H 1.07997 * 120.09165 * 0.02562 * 16 15 14 37 37 H 1.07998 * 119.91263 * 180.23314 * 17 16 15 38 38 H 1.08997 * 109.47376 * 125.02049 * 19 18 17 39 39 H 0.96706 * 114.00306 * 59.99609 * 20 19 18 40 40 H 1.48500 * 110.00131 * 58.68174 * 21 19 18 41 41 H 1.48501 * 109.99898 * 180.02562 * 21 19 18 42 42 H 1.08004 * 119.91388 * 179.97438 * 22 18 17 43 43 H 1.08006 * 120.08714 * 179.97438 * 23 22 18 44 44 H 1.09002 * 109.47153 * 179.97438 * 24 7 6 45 45 H 1.08993 * 109.47194 * 60.00154 * 24 7 6 46 46 H 1.08993 * 109.47839 * 300.00447 * 25 24 7 47 47 H 1.09000 * 109.47160 * 180.02562 * 25 24 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.1740 0.0000 0.0000 3 6 2.6460 0.0007 0.0000 4 1 3.0089 1.0285 0.0079 5 6 3.1564 -0.7301 1.2435 6 6 4.6864 -0.7288 1.2438 7 6 5.1971 -1.4397 -0.0110 8 1 4.8347 -2.4676 -0.0192 9 6 6.7271 -1.4389 -0.0105 10 7 7.2163 -2.2218 -1.1481 11 6 8.5416 -2.3604 -1.3507 12 8 9.3318 -1.8356 -0.5885 13 6 9.0304 -3.1424 -2.4880 14 6 10.3560 -3.2805 -2.6910 15 6 10.8475 -4.0663 -3.8348 16 6 9.9425 -4.6757 -4.7095 17 6 10.4107 -5.4065 -5.7811 18 6 11.7723 -5.5456 -5.9864 19 6 12.2755 -6.3504 -7.1569 20 8 12.9723 -7.5025 -6.6785 21 14 10.8333 -6.8883 -8.2065 22 6 12.6742 -4.9499 -5.1220 23 6 12.2216 -4.2119 -4.0488 24 6 4.6868 -0.7090 -1.2546 25 6 3.1568 -0.7103 -1.2549 26 1 -1.0501 -0.0010 0.0005 27 1 2.7928 -0.2233 2.1375 28 1 2.7935 -1.7578 1.2355 29 1 5.0489 0.2991 1.2520 30 1 5.0500 -1.2490 2.1299 31 1 7.0900 -0.4143 -0.0916 32 1 7.0904 -1.8806 0.9175 33 1 6.5864 -2.6398 -1.7558 34 1 8.3291 -3.6078 -3.1647 35 1 11.0573 -2.8148 -2.0146 36 1 8.8797 -4.5711 -4.5485 37 1 9.7130 -5.8745 -6.4597 38 1 12.9516 -5.7390 -7.7545 39 1 12.4306 -8.0935 -6.1377 40 1 10.0815 -5.7001 -8.6841 41 1 11.3162 -7.6835 -9.3640 42 1 13.7353 -5.0633 -5.2886 43 1 12.9266 -3.7479 -3.3748 44 1 5.0510 -1.2152 -2.1486 45 1 5.0493 0.3189 -1.2464 46 1 2.7942 -1.7381 -1.2631 47 1 2.7932 -0.1901 -2.1411 There are 60 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 60 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_17850112_12360594.mol2 47 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 08:24:22 Heat of formation + Delta-G solvation = 8.510817 kcal Electronic energy + Delta-G solvation = -25539.978630 eV Core-core repulsion = 21847.939216 eV Total energy + Delta-G solvation = -3692.039414 eV No. of doubly occupied orbitals = 60 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 326.167 amu Computer time = 0.89 seconds Orbital eigenvalues (eV) -41.00707 -40.60649 -39.80875 -37.83458 -36.34195 -35.06016 -34.17473 -32.31547 -31.93807 -31.72605 -31.05292 -27.78700 -26.53206 -24.28137 -23.96912 -23.69543 -22.74071 -21.88457 -21.11843 -20.34963 -19.07516 -18.85678 -18.09703 -17.38251 -16.77422 -16.64934 -16.47940 -16.23484 -16.06509 -15.66481 -15.56354 -15.30516 -15.16586 -15.00181 -14.70212 -14.62720 -14.17530 -14.02044 -13.82911 -13.68148 -13.34718 -13.30431 -13.21653 -13.03708 -12.50258 -12.27272 -12.23462 -12.08336 -11.79844 -11.72798 -11.68861 -11.58024 -11.35595 -10.97597 -10.89918 -10.84309 -10.49645 -10.07875 -10.06688 -9.29969 -5.10250 -0.58360 0.30219 0.89063 1.22041 1.57451 1.91336 1.91826 1.94275 2.20295 2.30749 2.75997 3.27000 3.37684 3.50435 3.57055 3.58889 3.64218 3.68400 3.74661 3.81035 4.04326 4.09742 4.14655 4.16970 4.24543 4.29137 4.32599 4.33754 4.36123 4.40212 4.46034 4.58526 4.66225 4.74540 4.76230 4.85889 4.88445 4.96156 5.01861 5.03872 5.05569 5.08805 5.10363 5.20262 5.22520 5.31049 5.34999 5.40129 5.46250 5.54965 5.80873 6.49833 6.50946 6.72549 7.26580 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.206 4.206 2 C -0.186 4.186 3 C 0.020 3.980 4 H 0.092 0.908 5 C -0.109 4.109 6 C -0.112 4.112 7 C -0.101 4.101 8 H 0.080 0.920 9 C 0.123 3.877 10 N -0.726 5.726 11 C 0.546 3.454 12 O -0.544 6.544 13 C -0.214 4.214 14 C -0.016 4.016 15 C -0.072 4.072 16 C -0.096 4.096 17 C -0.118 4.118 18 C -0.108 4.108 19 C -0.071 4.071 20 O -0.539 6.539 21 Si 0.686 3.314 22 C -0.094 4.094 23 C -0.092 4.092 24 C -0.115 4.115 25 C -0.110 4.110 26 H 0.217 0.783 27 H 0.069 0.931 28 H 0.068 0.932 29 H 0.070 0.930 30 H 0.072 0.928 31 H 0.070 0.930 32 H 0.070 0.930 33 H 0.401 0.599 34 H 0.130 0.870 35 H 0.138 0.862 36 H 0.132 0.868 37 H 0.130 0.870 38 H 0.115 0.885 39 H 0.380 0.620 40 H -0.257 1.257 41 H -0.254 1.254 42 H 0.130 0.870 43 H 0.132 0.868 44 H 0.066 0.934 45 H 0.069 0.931 46 H 0.067 0.933 47 H 0.068 0.932 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -4.097 -2.256 -0.572 4.712 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.223 4.223 2 C -0.186 4.186 3 C 0.002 3.998 4 H 0.110 0.890 5 C -0.147 4.147 6 C -0.150 4.150 7 C -0.119 4.119 8 H 0.098 0.902 9 C -0.001 4.001 10 N -0.377 5.377 11 C 0.335 3.665 12 O -0.423 6.423 13 C -0.234 4.234 14 C -0.036 4.036 15 C -0.073 4.073 16 C -0.114 4.114 17 C -0.135 4.135 18 C -0.109 4.109 19 C -0.182 4.182 20 O -0.344 6.344 21 Si 0.588 3.412 22 C -0.112 4.112 23 C -0.110 4.110 24 C -0.153 4.153 25 C -0.148 4.148 26 H 0.233 0.767 27 H 0.088 0.912 28 H 0.086 0.914 29 H 0.089 0.911 30 H 0.090 0.910 31 H 0.088 0.912 32 H 0.088 0.912 33 H 0.236 0.764 34 H 0.148 0.852 35 H 0.155 0.845 36 H 0.150 0.850 37 H 0.148 0.852 38 H 0.132 0.868 39 H 0.227 0.773 40 H -0.182 1.182 41 H -0.179 1.179 42 H 0.148 0.852 43 H 0.150 0.850 44 H 0.085 0.915 45 H 0.088 0.912 46 H 0.086 0.914 47 H 0.087 0.913 Dipole moment (debyes) X Y Z Total from point charges -3.433 -1.560 -1.136 3.938 hybrid contribution -0.215 0.305 -0.179 0.414 sum -3.648 -1.255 -1.314 4.076 Atomic orbital electron populations 1.24982 0.96019 1.00858 1.00409 1.23067 0.94311 1.00518 1.00672 1.18356 0.84306 1.00923 0.96219 0.89020 1.21538 0.95176 1.01046 0.96909 1.21513 0.95057 1.01342 0.97080 1.21454 0.93612 1.00796 0.96086 0.90181 1.21437 0.93184 0.96358 0.89105 1.45891 1.06951 1.54314 1.30580 1.18326 0.82237 0.80602 0.85299 1.90840 1.55369 1.48657 1.47392 1.22898 0.96926 1.03993 0.99619 1.22410 0.95941 0.91840 0.93419 1.19073 0.93602 0.98957 0.95619 1.21358 0.99723 0.96379 0.93912 1.20931 0.94500 0.99935 0.98149 1.20524 0.93607 0.99023 0.97716 1.25102 1.05780 0.88655 0.98633 1.86521 1.41146 1.34235 1.72500 0.94778 0.80221 0.84722 0.81455 1.20998 1.00109 0.96095 0.94041 1.21468 0.94539 0.97620 0.97401 1.21630 0.95009 1.01304 0.97338 1.21548 0.95284 1.01113 0.96810 0.76652 0.91190 0.91355 0.91140 0.90969 0.91167 0.91166 0.76415 0.85212 0.84462 0.85032 0.85250 0.86801 0.77306 1.18198 1.17880 0.85203 0.85039 0.91500 0.91234 0.91392 0.91335 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.21 -0.19 19.25 29.55 0.57 0.38 16 2 C -0.19 -0.24 12.56 -37.12 -0.47 -0.71 16 3 C 0.02 -0.02 2.56 -93.40 -0.24 -0.26 16 4 H 0.09 -0.10 8.14 -51.93 -0.42 -0.52 16 5 C -0.11 0.17 5.16 -26.73 -0.14 0.03 16 6 C -0.11 0.27 5.20 -26.73 -0.14 0.13 16 7 C -0.10 0.28 2.22 -90.62 -0.20 0.07 16 8 H 0.08 -0.24 8.14 -51.93 -0.42 -0.66 16 9 C 0.12 -0.12 5.07 -4.04 -0.02 -0.14 16 10 N -0.73 0.78 5.28 -61.70 -0.33 0.46 16 11 C 0.55 0.97 7.74 -12.96 -0.10 0.87 16 12 O -0.54 -3.27 16.23 5.20 0.08 -3.19 16 13 C -0.21 0.11 9.41 -37.50 -0.35 -0.25 16 14 C -0.02 0.00 9.46 -37.15 -0.35 -0.36 16 15 C -0.07 0.01 5.87 -105.06 -0.62 -0.61 16 16 C -0.10 0.12 9.41 -39.11 -0.37 -0.25 16 17 C -0.12 0.16 8.65 -39.65 -0.34 -0.18 16 18 C -0.11 0.05 5.36 -104.50 -0.56 -0.51 16 19 C -0.07 0.05 2.80 36.01 0.10 0.15 16 20 O -0.54 0.08 12.83 -35.23 -0.45 -0.37 16 21 Si 0.69 -1.08 29.78 -169.99 -5.06 -6.14 16 22 C -0.09 0.00 9.66 -39.65 -0.38 -0.38 16 23 C -0.09 0.01 9.80 -39.12 -0.38 -0.37 16 24 C -0.12 0.32 5.08 -26.73 -0.14 0.19 16 25 C -0.11 0.20 5.16 -26.73 -0.14 0.06 16 26 H 0.22 -0.43 7.80 -54.09 -0.42 -0.85 16 27 H 0.07 -0.08 8.14 -51.93 -0.42 -0.51 16 28 H 0.07 -0.08 8.14 -51.93 -0.42 -0.51 16 29 H 0.07 -0.17 8.14 -51.93 -0.42 -0.59 16 30 H 0.07 -0.18 8.14 -51.93 -0.42 -0.60 16 31 H 0.07 0.01 8.14 -51.93 -0.42 -0.41 16 32 H 0.07 0.01 8.14 -51.93 -0.42 -0.41 16 33 H 0.40 -1.51 7.63 -40.82 -0.31 -1.82 16 34 H 0.13 -0.44 6.07 -52.49 -0.32 -0.76 16 35 H 0.14 0.13 7.52 -52.49 -0.39 -0.27 16 36 H 0.13 -0.46 6.17 -52.49 -0.32 -0.79 16 37 H 0.13 -0.44 4.88 -52.49 -0.26 -0.70 16 38 H 0.11 -0.03 7.96 -51.93 -0.41 -0.44 16 39 H 0.38 -1.52 8.70 45.56 0.40 -1.13 16 40 H -0.26 -0.20 7.11 56.52 0.40 0.21 16 41 H -0.25 -0.47 7.11 56.52 0.40 -0.07 16 42 H 0.13 -0.07 8.06 -52.48 -0.42 -0.49 16 43 H 0.13 -0.20 8.06 -52.48 -0.42 -0.62 16 44 H 0.07 -0.23 7.18 -51.93 -0.37 -0.60 16 45 H 0.07 -0.16 8.14 -51.93 -0.42 -0.58 16 46 H 0.07 -0.11 8.14 -51.93 -0.42 -0.53 16 47 H 0.07 -0.10 8.14 -51.93 -0.42 -0.52 16 LS Contribution 388.36 15.07 5.85 5.85 Total: 0.00 -8.38 388.36 -11.28 -19.66 By element: Atomic # 1 Polarization: -7.05 SS G_CDS: -7.11 Total: -14.16 kcal Atomic # 6 Polarization: 2.15 SS G_CDS: -4.27 Total: -2.12 kcal Atomic # 7 Polarization: 0.78 SS G_CDS: -0.33 Total: 0.46 kcal Atomic # 8 Polarization: -3.19 SS G_CDS: -0.37 Total: -3.56 kcal Atomic # 14 Polarization: -1.08 SS G_CDS: -5.06 Total: -6.14 kcal Total LS contribution 5.85 Total: 5.85 kcal Total: -8.38 -11.28 -19.66 kcal The number of atoms in the molecule is 47 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17850112_12360594.mol2 47 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 28.173 kcal (2) G-P(sol) polarization free energy of solvation -8.380 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 19.793 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.282 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.662 kcal (6) G-S(sol) free energy of system = (1) + (5) 8.511 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.89 seconds