Wall clock time and date at job start Sun Mar 7 2021 08:24:31 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.17406 * 1 3 3 C 1.47199 * 179.97438 * 2 1 4 4 H 1.08992 * 109.47439 * 36.77276 * 3 2 1 5 5 C 1.53002 * 109.46792 * 156.77187 * 3 2 1 6 6 C 1.52997 * 109.46978 * 179.97438 * 5 3 2 7 7 C 1.53006 * 109.47164 * 299.99874 * 6 5 3 8 8 H 1.08998 * 109.46505 * 299.99708 * 7 6 5 9 9 C 1.52992 * 109.47223 * 180.02562 * 7 6 5 10 10 N 1.46499 * 109.47658 * 64.99659 * 9 7 6 11 11 C 1.34782 * 120.00273 * 180.02562 * 10 9 7 12 12 O 1.21563 * 120.00013 * 359.97438 * 11 10 9 13 13 C 1.47726 * 119.99814 * 180.02562 * 11 10 9 14 14 C 1.39620 * 120.11436 * 179.72428 * 13 11 10 15 15 C 1.37867 * 119.87670 * 179.74235 * 14 13 11 16 16 C 1.50700 * 119.94070 * 180.29282 * 15 14 13 17 17 O 1.42898 * 109.46867 * 15.24058 * 16 15 14 18 18 Si 1.86302 * 109.46970 * 135.23623 * 16 15 14 19 19 C 1.38626 * 120.11660 * 0.53194 * 15 14 13 20 20 F 1.35108 * 119.88163 * 179.71923 * 19 15 14 21 21 C 1.38672 * 120.24067 * 359.74261 * 19 15 14 22 22 C 1.37810 * 120.12135 * 359.97401 * 21 19 15 23 23 C 1.52997 * 109.47127 * 59.99836 * 7 6 5 24 24 C 1.52996 * 109.47001 * 276.76628 * 3 2 1 25 25 H 4.18734 * 15.03993 * 0.02562 * 4 2 1 26 26 H 1.09002 * 109.47097 * 299.99720 * 5 3 2 27 27 H 1.09001 * 109.47142 * 59.99685 * 5 3 2 28 28 H 1.09001 * 109.47375 * 59.99908 * 6 5 3 29 29 H 1.09000 * 109.47140 * 179.97438 * 6 5 3 30 30 H 1.09001 * 109.47563 * 185.00049 * 9 7 6 31 31 H 1.09004 * 109.47313 * 304.99704 * 9 7 6 32 32 H 0.97002 * 119.99938 * 0.02562 * 10 9 7 33 33 H 1.07999 * 120.06538 * 0.02562 * 14 13 11 34 34 H 1.08994 * 109.47451 * 255.23540 * 16 15 14 35 35 H 0.96693 * 114.00666 * 60.00213 * 17 16 15 36 36 H 1.48496 * 110.00038 * 58.68279 * 18 16 15 37 37 H 1.48497 * 110.00110 * 180.02562 * 18 16 15 38 38 H 1.08006 * 119.94288 * 180.02562 * 21 19 15 39 39 H 1.07997 * 120.06254 * 180.02562 * 22 21 19 40 40 H 1.09002 * 109.47153 * 180.02562 * 23 7 6 41 41 H 1.09001 * 109.46832 * 60.00321 * 23 7 6 42 42 H 1.09004 * 109.47368 * 60.00428 * 24 3 2 43 43 H 1.09001 * 109.47372 * 300.00584 * 24 3 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.1741 0.0000 0.0000 3 6 2.6461 0.0007 0.0000 4 1 3.0098 -0.8223 -0.6151 5 6 3.1554 1.3265 -0.5689 6 6 4.6854 1.3275 -0.5684 7 6 5.1950 1.1580 0.8644 8 1 4.8309 1.9811 1.4792 9 6 6.7249 1.1596 0.8650 10 7 7.2121 2.4719 0.4331 11 6 8.5371 2.7070 0.3561 12 8 9.3278 1.8302 0.6456 13 6 9.0283 4.0306 -0.0789 14 6 10.4002 4.2786 -0.1539 15 6 10.8533 5.5139 -0.5656 16 6 12.3338 5.7810 -0.6535 17 8 13.0446 4.5420 -0.6130 18 14 12.7121 6.6619 -2.2510 19 6 9.9494 6.5122 -0.8941 20 9 10.3986 7.7229 -1.2916 21 6 8.5857 6.2730 -0.8159 22 6 8.1219 5.0400 -0.4111 23 6 4.6856 -0.1678 1.4333 24 6 3.1561 -0.1691 1.4324 25 1 -1.0499 -0.0005 -0.0010 26 1 2.7920 1.4475 -1.5894 27 1 2.7916 2.1495 0.0462 28 1 5.0495 0.5044 -1.1833 29 1 5.0482 2.2718 -0.9741 30 1 7.0881 0.9503 1.8712 31 1 7.0894 0.3935 0.1806 32 1 6.5812 3.1717 0.2025 33 1 11.1053 3.5028 0.1056 34 1 12.6412 6.4039 0.1864 35 1 12.8208 3.9364 -1.3327 36 1 11.9542 7.9370 -2.3196 37 1 14.1692 6.9306 -2.3501 38 1 7.8857 7.0542 -1.0733 39 1 7.0597 4.8547 -0.3509 40 1 5.0482 -0.2884 2.4541 41 1 5.0497 -0.9908 0.8184 42 1 2.7932 -1.1136 1.8378 43 1 2.7923 0.6540 2.0476 There are 58 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 58 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_17850112_12496548.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 08:24:31 Heat of formation + Delta-G solvation = -38.500033 kcal Electronic energy + Delta-G solvation = -25756.816927 eV Core-core repulsion = 21877.048754 eV Total energy + Delta-G solvation = -3879.768174 eV No. of doubly occupied orbitals = 58 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 318.142 amu Computer time = 0.88 seconds Orbital eigenvalues (eV) -50.39389 -41.45602 -40.31821 -39.46973 -37.71605 -36.39806 -34.33903 -32.89100 -32.15838 -31.95354 -31.23514 -27.58395 -26.87090 -24.75876 -23.84845 -23.30412 -22.83139 -21.53086 -20.94613 -19.39237 -19.09289 -18.79485 -18.07455 -17.72647 -17.13337 -16.84307 -16.61569 -16.23538 -15.92589 -15.80144 -15.62503 -15.34041 -15.29033 -15.20163 -14.91602 -14.68339 -14.09730 -14.04102 -13.75709 -13.62817 -13.44433 -13.33942 -13.20282 -12.79777 -12.53150 -12.36006 -12.26284 -11.77648 -11.72375 -11.61320 -11.35146 -11.05667 -10.97995 -10.90840 -10.87071 -10.23028 -10.08392 -9.73940 -5.03453 -0.53549 -0.05577 1.21130 1.63174 1.65722 1.89544 1.92621 1.98178 2.03596 2.57507 2.94073 3.17240 3.24361 3.29743 3.50692 3.53415 3.58528 3.60447 3.67627 3.83958 4.00994 4.04600 4.13115 4.24699 4.28799 4.30287 4.33080 4.37223 4.48085 4.54631 4.62074 4.70222 4.72358 4.78983 4.82138 4.92717 4.97607 4.99933 5.02327 5.03406 5.07163 5.17838 5.19446 5.28492 5.36237 5.53724 6.35954 6.43047 6.70966 7.11615 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.205 4.205 2 C -0.186 4.186 3 C 0.020 3.980 4 H 0.092 0.908 5 C -0.110 4.110 6 C -0.116 4.116 7 C -0.101 4.101 8 H 0.080 0.920 9 C 0.123 3.877 10 N -0.725 5.725 11 C 0.560 3.440 12 O -0.529 6.529 13 C -0.142 4.142 14 C -0.020 4.020 15 C -0.155 4.155 16 C -0.066 4.066 17 O -0.535 6.535 18 Si 0.682 3.318 19 C 0.118 3.882 20 F -0.121 7.121 21 C -0.151 4.151 22 C -0.060 4.060 23 C -0.112 4.112 24 C -0.109 4.109 25 H 0.217 0.783 26 H 0.068 0.932 27 H 0.067 0.933 28 H 0.070 0.930 29 H 0.066 0.934 30 H 0.072 0.928 31 H 0.073 0.927 32 H 0.400 0.600 33 H 0.156 0.844 34 H 0.123 0.877 35 H 0.382 0.618 36 H -0.228 1.228 37 H -0.258 1.258 38 H 0.146 0.854 39 H 0.137 0.863 40 H 0.072 0.928 41 H 0.071 0.929 42 H 0.070 0.930 43 H 0.067 0.933 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -4.816 -0.004 -2.346 5.357 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.222 4.222 2 C -0.186 4.186 3 C 0.002 3.998 4 H 0.110 0.890 5 C -0.148 4.148 6 C -0.153 4.153 7 C -0.120 4.120 8 H 0.098 0.902 9 C 0.000 4.000 10 N -0.378 5.378 11 C 0.347 3.653 12 O -0.406 6.406 13 C -0.145 4.145 14 C -0.038 4.038 15 C -0.156 4.156 16 C -0.176 4.176 17 O -0.341 6.341 18 Si 0.582 3.418 19 C 0.098 3.902 20 F -0.100 7.100 21 C -0.170 4.170 22 C -0.079 4.079 23 C -0.150 4.150 24 C -0.147 4.147 25 H 0.233 0.767 26 H 0.087 0.913 27 H 0.086 0.914 28 H 0.089 0.911 29 H 0.084 0.916 30 H 0.090 0.910 31 H 0.091 0.909 32 H 0.235 0.765 33 H 0.174 0.826 34 H 0.140 0.860 35 H 0.229 0.771 36 H -0.152 1.152 37 H -0.183 1.183 38 H 0.164 0.836 39 H 0.154 0.846 40 H 0.091 0.909 41 H 0.089 0.911 42 H 0.088 0.912 43 H 0.086 0.914 Dipole moment (debyes) X Y Z Total from point charges -3.642 0.389 -1.984 4.166 hybrid contribution -0.808 0.616 0.519 1.141 sum -4.450 1.004 -1.464 4.791 Atomic orbital electron populations 1.24987 0.96025 1.00657 1.00542 1.23063 0.94310 1.00607 1.00642 1.18351 0.84319 0.99193 0.97916 0.88979 1.21551 0.95246 0.96438 1.01546 1.21638 0.95074 1.02541 0.96050 1.21464 0.93519 0.99523 0.97521 0.90183 1.21479 0.93296 0.84322 1.00952 1.45917 1.06759 1.15853 1.69280 1.18108 0.82352 0.87206 0.77647 1.90827 1.55176 1.45917 1.48685 1.19986 0.94326 0.94462 1.05707 1.20977 0.94594 0.95849 0.92423 1.20375 0.96810 0.94437 1.03975 1.25010 0.87807 0.92698 1.12048 1.86518 1.65414 1.27652 1.54485 0.95246 0.81397 0.83288 0.81904 1.17771 0.92642 0.80936 0.98835 1.91584 1.88788 1.42121 1.87458 1.21091 0.93636 0.98935 1.03357 1.21162 0.99634 0.91684 0.95404 1.21501 0.95089 0.96593 1.01779 1.21531 0.95164 1.02853 0.95152 0.76658 0.91280 0.91408 0.91106 0.91582 0.90963 0.90872 0.76466 0.82637 0.85982 0.77055 1.15227 1.18328 0.83606 0.84554 0.90936 0.91061 0.91156 0.91376 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.21 -0.13 19.25 29.55 0.57 0.44 16 2 C -0.19 -0.18 12.56 -37.12 -0.47 -0.64 16 3 C 0.02 -0.03 2.57 -93.41 -0.24 -0.27 16 4 H 0.09 -0.15 8.14 -51.93 -0.42 -0.57 16 5 C -0.11 0.26 5.16 -26.73 -0.14 0.13 16 6 C -0.12 0.41 5.08 -26.73 -0.14 0.27 16 7 C -0.10 0.35 2.22 -90.62 -0.20 0.14 16 8 H 0.08 -0.29 8.14 -51.93 -0.42 -0.71 16 9 C 0.12 -0.22 5.07 -4.05 -0.02 -0.24 16 10 N -0.73 1.30 5.23 -61.29 -0.32 0.98 16 11 C 0.56 0.67 7.77 -12.38 -0.10 0.57 16 12 O -0.53 -2.72 16.34 5.31 0.09 -2.63 16 13 C -0.14 0.03 5.87 -104.97 -0.62 -0.59 16 14 C -0.02 -0.01 8.78 -39.20 -0.34 -0.35 16 15 C -0.15 0.00 5.13 -104.61 -0.54 -0.54 16 16 C -0.07 0.00 2.96 36.01 0.11 0.11 16 17 O -0.54 -0.16 11.64 -35.23 -0.41 -0.57 16 18 Si 0.68 -0.33 30.81 -169.99 -5.24 -5.56 16 19 C 0.12 0.00 6.67 -39.28 -0.26 -0.26 16 20 F -0.12 -0.17 12.82 2.25 0.03 -0.14 16 21 C -0.15 0.27 10.01 -39.58 -0.40 -0.13 16 22 C -0.06 0.15 9.54 -39.20 -0.37 -0.23 16 23 C -0.11 0.33 5.20 -26.76 -0.14 0.19 16 24 C -0.11 0.22 5.15 -26.76 -0.14 0.08 16 25 H 0.22 -0.48 7.80 -54.09 -0.42 -0.90 16 26 H 0.07 -0.14 8.14 -51.93 -0.42 -0.56 16 27 H 0.07 -0.14 8.14 -51.93 -0.42 -0.57 16 28 H 0.07 -0.22 8.14 -51.93 -0.42 -0.64 16 29 H 0.07 -0.29 7.18 -51.93 -0.37 -0.66 16 30 H 0.07 -0.05 8.14 -51.93 -0.42 -0.47 16 31 H 0.07 -0.06 8.14 -51.93 -0.42 -0.49 16 32 H 0.40 -1.75 5.68 -40.82 -0.23 -1.98 16 33 H 0.16 0.16 6.67 -52.49 -0.35 -0.19 16 34 H 0.12 0.06 7.96 -51.93 -0.41 -0.35 16 35 H 0.38 -1.36 8.44 45.56 0.38 -0.98 16 36 H -0.23 -0.39 5.27 56.52 0.30 -0.09 16 37 H -0.26 -0.71 7.11 56.52 0.40 -0.31 16 38 H 0.15 -0.53 8.06 -52.48 -0.42 -0.95 16 39 H 0.14 -0.75 6.40 -52.49 -0.34 -1.08 16 40 H 0.07 -0.22 8.14 -51.93 -0.42 -0.64 16 41 H 0.07 -0.21 8.14 -51.93 -0.42 -0.64 16 42 H 0.07 -0.11 8.14 -51.93 -0.42 -0.53 16 43 H 0.07 -0.11 8.14 -51.93 -0.42 -0.53 16 LS Contribution 355.97 15.07 5.36 5.36 Total: 0.00 -7.68 355.97 -10.03 -17.71 By element: Atomic # 1 Polarization: -7.73 SS G_CDS: -6.12 Total: -13.84 kcal Atomic # 6 Polarization: 2.12 SS G_CDS: -3.43 Total: -1.31 kcal Atomic # 7 Polarization: 1.30 SS G_CDS: -0.32 Total: 0.98 kcal Atomic # 8 Polarization: -2.87 SS G_CDS: -0.32 Total: -3.20 kcal Atomic # 9 Polarization: -0.17 SS G_CDS: 0.03 Total: -0.14 kcal Atomic # 14 Polarization: -0.33 SS G_CDS: -5.24 Total: -5.56 kcal Total LS contribution 5.36 Total: 5.36 kcal Total: -7.68 -10.03 -17.71 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17850112_12496548.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -20.790 kcal (2) G-P(sol) polarization free energy of solvation -7.677 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -28.467 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.033 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -17.710 kcal (6) G-S(sol) free energy of system = (1) + (5) -38.500 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.88 seconds