Wall clock time and date at job start Sun Mar 7 2021 08:26:09 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.17404 * 1 3 3 C 1.47193 * 179.97438 * 2 1 4 4 H 1.08994 * 109.47535 * 297.02123 * 3 2 1 5 5 C 1.53007 * 109.47211 * 57.02459 * 3 2 1 6 6 C 1.53003 * 109.46963 * 180.02562 * 5 3 2 7 7 C 1.53001 * 109.47020 * 299.99597 * 6 5 3 8 8 H 1.09008 * 109.46939 * 300.00621 * 7 6 5 9 9 C 1.52996 * 109.47238 * 180.02562 * 7 6 5 10 10 N 1.46498 * 109.47059 * 64.99625 * 9 7 6 11 11 C 1.34777 * 119.99828 * 179.72339 * 10 9 7 12 12 O 1.21283 * 120.00222 * 0.28168 * 11 10 9 13 13 C 1.50703 * 120.00290 * 180.27728 * 11 10 9 14 14 O 1.42900 * 109.47361 * 180.02562 * 13 11 10 15 15 C 1.35902 * 116.99916 * 179.97438 * 14 13 11 16 16 C 1.38735 * 120.05203 * 359.73142 * 15 14 13 17 17 C 1.38146 * 119.93650 * 179.73922 * 16 15 14 18 18 C 1.38262 * 120.05965 * 0.50854 * 17 16 15 19 19 C 1.50701 * 119.94551 * 179.74268 * 18 17 16 20 20 O 1.42896 * 109.47110 * 245.02215 * 19 18 17 21 21 Si 1.86296 * 109.47325 * 5.02150 * 19 18 17 22 22 C 1.38264 * 120.10942 * 359.76560 * 18 17 16 23 23 C 1.38141 * 120.05764 * 359.97438 * 22 18 17 24 24 C 1.53003 * 109.47108 * 59.99877 * 7 6 5 25 25 C 1.52996 * 109.47530 * 300.00383 * 24 7 6 26 26 H 4.18741 * 15.04041 * 359.97438 * 4 2 1 27 27 H 1.08997 * 109.46534 * 299.99635 * 5 3 2 28 28 H 1.08994 * 109.47145 * 59.99425 * 5 3 2 29 29 H 1.09001 * 109.46736 * 179.97438 * 6 5 3 30 30 H 1.08995 * 109.47226 * 59.99434 * 6 5 3 31 31 H 1.09004 * 109.47066 * 304.99893 * 9 7 6 32 32 H 1.08994 * 109.46974 * 185.00040 * 9 7 6 33 33 H 0.97001 * 120.00384 * 0.02562 * 10 9 7 34 34 H 1.08998 * 109.46954 * 300.00581 * 13 11 10 35 35 H 1.09002 * 109.46946 * 59.99717 * 13 11 10 36 36 H 1.07996 * 120.03150 * 359.97438 * 16 15 14 37 37 H 1.08008 * 119.97071 * 180.27481 * 17 16 15 38 38 H 1.08998 * 109.46978 * 125.02544 * 19 18 17 39 39 H 0.96702 * 114.00471 * 180.02562 * 20 19 18 40 40 H 1.48499 * 110.00000 * 300.00227 * 21 19 18 41 41 H 1.48496 * 109.99787 * 61.31837 * 21 19 18 42 42 H 1.08009 * 119.97194 * 179.97438 * 22 18 17 43 43 H 1.08002 * 120.02694 * 179.97438 * 23 22 18 44 44 H 1.09000 * 109.46800 * 60.00835 * 24 7 6 45 45 H 1.09002 * 109.46892 * 179.97438 * 24 7 6 46 46 H 1.09001 * 109.46987 * 179.97438 * 25 24 7 47 47 H 1.09003 * 109.46613 * 299.99696 * 25 24 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.1740 0.0000 0.0000 3 6 2.6460 0.0007 0.0000 4 1 3.0096 -0.4660 0.9154 5 6 3.1564 -0.7843 -1.2102 6 6 4.6864 -0.7841 -1.2098 7 6 5.1962 0.6565 -1.2844 8 1 4.8329 1.1236 -2.1999 9 6 6.7262 0.6568 -1.2846 10 7 7.2144 0.0091 -2.5046 11 6 8.5394 -0.1012 -2.7250 12 8 9.3277 0.3311 -1.9109 13 6 9.0417 -0.7619 -3.9829 14 8 10.4707 -0.7576 -3.9853 15 6 11.0876 -1.3205 -5.0574 16 6 10.3330 -1.8708 -6.0833 17 6 10.9625 -2.4376 -7.1746 18 6 12.3433 -2.4662 -7.2400 19 6 13.0273 -3.0903 -8.4289 20 8 13.7551 -4.2457 -8.0075 21 14 11.7497 -3.5873 -9.6903 22 6 13.0975 -1.9235 -6.2161 23 6 12.4729 -1.3507 -5.1252 24 6 4.6858 1.4415 -0.0743 25 6 3.1558 1.4413 -0.0746 26 1 -1.0500 0.0002 0.0007 27 1 2.7935 -1.8107 -1.1567 28 1 2.7928 -0.3176 -2.1256 29 1 5.0500 -1.3437 -2.0716 30 1 5.0495 -1.2510 -0.2943 31 1 7.0897 0.1116 -0.4135 32 1 7.0893 1.6838 -1.2481 33 1 6.5840 -0.3364 -3.1559 34 1 8.6817 -1.7899 -4.0220 35 1 8.6749 -0.2153 -4.8517 36 1 9.2545 -1.8526 -6.0307 37 1 10.3755 -2.8622 -7.9757 38 1 13.7146 -2.3698 -8.8722 39 1 14.2220 -4.6990 -8.7227 40 1 10.8065 -4.5695 -9.0981 41 1 11.0074 -2.3900 -10.1602 42 1 14.1760 -1.9474 -6.2693 43 1 13.0626 -0.9273 -4.3255 44 1 5.0491 0.9746 0.8411 45 1 5.0494 2.4677 -0.1273 46 1 2.7922 2.0002 0.7877 47 1 2.7927 1.9083 -0.9902 There are 61 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 61 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_17850112_2989410.mol2 47 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 08:26:09 Heat of formation + Delta-G solvation = -34.627710 kcal Electronic energy + Delta-G solvation = -26637.288827 eV Core-core repulsion = 22752.922734 eV Total energy + Delta-G solvation = -3884.366093 eV No. of doubly occupied orbitals = 61 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 330.166 amu Computer time = 0.89 seconds Orbital eigenvalues (eV) -41.57023 -40.79824 -39.92208 -38.87628 -37.21199 -36.36258 -34.29629 -32.53648 -31.98613 -31.88799 -31.65525 -29.73448 -26.88850 -26.05980 -24.12582 -23.86407 -22.96519 -22.21909 -21.66357 -20.97658 -19.52860 -19.10400 -18.50514 -18.33758 -17.54017 -17.30999 -16.78601 -16.65394 -16.49852 -16.01357 -15.69413 -15.55653 -15.47885 -15.31924 -15.09069 -14.82572 -14.47074 -14.16711 -14.03832 -13.84613 -13.76653 -13.58828 -13.40388 -13.35468 -13.21956 -12.55715 -12.46580 -12.28018 -12.17481 -11.94980 -11.86465 -11.78603 -11.73847 -11.62982 -11.00436 -10.92372 -10.87763 -10.32314 -10.22117 -10.06302 -9.22789 -5.00329 0.25753 0.28010 1.26059 1.41868 1.47052 1.60420 1.88672 1.91634 1.93196 2.52761 2.60854 3.22616 3.37866 3.45234 3.51484 3.57911 3.62038 3.67099 3.76466 3.81369 3.85031 3.93686 3.99695 4.11330 4.21358 4.23551 4.26923 4.28474 4.34625 4.35576 4.44659 4.52344 4.59524 4.62046 4.69743 4.79506 4.90810 4.91202 4.98573 5.00753 5.05335 5.13069 5.16296 5.17730 5.21386 5.24383 5.33673 5.48667 5.64732 6.18963 6.33649 6.62009 6.69980 7.06112 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.205 4.205 2 C -0.186 4.186 3 C 0.020 3.980 4 H 0.092 0.908 5 C -0.110 4.110 6 C -0.116 4.116 7 C -0.101 4.101 8 H 0.080 0.920 9 C 0.124 3.876 10 N -0.727 5.727 11 C 0.515 3.485 12 O -0.512 6.512 13 C 0.039 3.961 14 O -0.287 6.287 15 C 0.134 3.866 16 C -0.205 4.205 17 C -0.082 4.082 18 C -0.112 4.112 19 C -0.067 4.067 20 O -0.546 6.546 21 Si 0.681 3.319 22 C -0.048 4.048 23 C -0.143 4.143 24 C -0.112 4.112 25 C -0.109 4.109 26 H 0.217 0.783 27 H 0.068 0.932 28 H 0.067 0.933 29 H 0.066 0.934 30 H 0.070 0.930 31 H 0.073 0.927 32 H 0.072 0.928 33 H 0.402 0.598 34 H 0.095 0.905 35 H 0.094 0.906 36 H 0.131 0.869 37 H 0.121 0.879 38 H 0.074 0.926 39 H 0.382 0.618 40 H -0.252 1.252 41 H -0.256 1.256 42 H 0.137 0.863 43 H 0.139 0.861 44 H 0.071 0.929 45 H 0.072 0.928 46 H 0.070 0.930 47 H 0.068 0.932 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.546 -1.258 -4.794 5.572 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.222 4.222 2 C -0.186 4.186 3 C 0.002 3.998 4 H 0.110 0.890 5 C -0.148 4.148 6 C -0.153 4.153 7 C -0.120 4.120 8 H 0.099 0.901 9 C 0.001 3.999 10 N -0.382 5.382 11 C 0.300 3.700 12 O -0.385 6.385 13 C -0.040 4.040 14 O -0.199 6.199 15 C 0.089 3.911 16 C -0.223 4.223 17 C -0.099 4.099 18 C -0.113 4.113 19 C -0.177 4.177 20 O -0.352 6.352 21 Si 0.583 3.417 22 C -0.066 4.066 23 C -0.162 4.162 24 C -0.150 4.150 25 C -0.147 4.147 26 H 0.234 0.766 27 H 0.087 0.913 28 H 0.086 0.914 29 H 0.084 0.916 30 H 0.089 0.911 31 H 0.091 0.909 32 H 0.091 0.909 33 H 0.236 0.764 34 H 0.112 0.888 35 H 0.112 0.888 36 H 0.149 0.851 37 H 0.138 0.862 38 H 0.092 0.908 39 H 0.229 0.771 40 H -0.176 1.176 41 H -0.180 1.180 42 H 0.154 0.846 43 H 0.156 0.844 44 H 0.089 0.911 45 H 0.091 0.909 46 H 0.089 0.911 47 H 0.086 0.914 Dipole moment (debyes) X Y Z Total from point charges -2.961 -0.683 -3.632 4.735 hybrid contribution -0.751 0.057 -0.031 0.754 sum -3.712 -0.625 -3.663 5.252 Atomic orbital electron populations 1.24991 0.96025 1.00449 1.00705 1.23054 0.94302 1.00688 1.00602 1.18351 0.84344 0.97191 0.99910 0.88984 1.21550 0.95210 1.00437 0.97576 1.21640 0.95116 0.95813 1.02766 1.21463 0.93368 0.96899 1.00225 0.90118 1.21479 0.93336 0.98364 0.86684 1.45826 1.06283 1.61813 1.24231 1.19994 0.82681 0.79960 0.87407 1.90793 1.55002 1.46638 1.46097 1.22481 0.81371 1.02341 0.97779 1.86174 1.18684 1.75035 1.39994 1.19046 0.92489 0.93295 0.86281 1.21112 1.00078 1.05517 0.95641 1.20664 0.93844 0.98240 0.97195 1.19258 0.92875 1.02179 0.96960 1.24610 1.02642 0.90145 1.00347 1.86502 1.68776 1.41293 1.38676 0.95318 0.79770 0.82700 0.83905 1.20855 1.00326 0.94011 0.91388 1.20542 0.91251 1.04019 1.00377 1.21513 0.95117 1.00641 0.97718 1.21538 0.95108 0.95024 1.03003 0.76634 0.91293 0.91390 0.91562 0.91133 0.90906 0.90943 0.76355 0.88765 0.88769 0.85092 0.86171 0.90841 0.77076 1.17648 1.18045 0.84556 0.84357 0.91065 0.90913 0.91122 0.91353 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.20 -0.18 19.25 29.55 0.57 0.39 16 2 C -0.19 -0.23 12.56 -37.13 -0.47 -0.69 16 3 C 0.02 -0.02 2.56 -93.41 -0.24 -0.26 16 4 H 0.09 -0.11 8.14 -51.93 -0.42 -0.54 16 5 C -0.11 0.22 5.16 -26.73 -0.14 0.08 16 6 C -0.12 0.36 5.08 -26.73 -0.14 0.22 16 7 C -0.10 0.31 2.22 -90.62 -0.20 0.11 16 8 H 0.08 -0.27 8.14 -51.92 -0.42 -0.69 16 9 C 0.12 -0.17 5.07 -4.04 -0.02 -0.19 16 10 N -0.73 1.22 5.28 -60.30 -0.32 0.91 16 11 C 0.52 0.89 7.91 -10.98 -0.09 0.80 16 12 O -0.51 -3.49 16.50 -14.36 -0.24 -3.72 16 13 C 0.04 -0.01 5.22 36.01 0.19 0.18 16 14 O -0.29 -1.06 9.67 -39.34 -0.38 -1.44 16 15 C 0.13 0.41 6.69 -39.22 -0.26 0.15 16 16 C -0.20 -0.34 9.04 -39.43 -0.36 -0.70 16 17 C -0.08 -0.19 8.66 -39.61 -0.34 -0.54 16 18 C -0.11 -0.28 5.38 -104.60 -0.56 -0.84 16 19 C -0.07 0.00 2.79 36.01 0.10 0.10 16 20 O -0.55 -0.20 12.81 -35.23 -0.45 -0.65 16 21 Si 0.68 -0.76 29.85 -169.99 -5.07 -5.83 16 22 C -0.05 -0.11 9.68 -39.61 -0.38 -0.49 16 23 C -0.14 -0.41 9.99 -39.44 -0.39 -0.81 16 24 C -0.11 0.29 5.20 -26.73 -0.14 0.16 16 25 C -0.11 0.19 5.16 -26.73 -0.14 0.05 16 26 H 0.22 -0.43 7.80 -54.09 -0.42 -0.86 16 27 H 0.07 -0.11 8.14 -51.93 -0.42 -0.53 16 28 H 0.07 -0.12 8.14 -51.93 -0.42 -0.54 16 29 H 0.07 -0.26 7.18 -51.93 -0.37 -0.63 16 30 H 0.07 -0.18 8.14 -51.93 -0.42 -0.61 16 31 H 0.07 -0.02 8.14 -51.93 -0.42 -0.44 16 32 H 0.07 -0.02 8.14 -51.93 -0.42 -0.44 16 33 H 0.40 -1.88 7.66 -40.82 -0.31 -2.19 16 34 H 0.09 -0.25 7.65 -51.93 -0.40 -0.65 16 35 H 0.09 -0.26 7.68 -51.93 -0.40 -0.66 16 36 H 0.13 -0.16 6.30 -52.49 -0.33 -0.49 16 37 H 0.12 0.18 4.86 -52.48 -0.26 -0.08 16 38 H 0.07 -0.12 7.96 -51.93 -0.41 -0.53 16 39 H 0.38 -1.80 8.74 45.56 0.40 -1.40 16 40 H -0.25 -0.49 7.05 56.52 0.40 -0.09 16 41 H -0.26 -0.32 7.11 56.52 0.40 0.08 16 42 H 0.14 0.10 8.06 -52.48 -0.42 -0.32 16 43 H 0.14 0.27 8.06 -52.49 -0.42 -0.15 16 44 H 0.07 -0.18 8.14 -51.93 -0.42 -0.61 16 45 H 0.07 -0.20 8.14 -51.93 -0.42 -0.62 16 46 H 0.07 -0.09 8.14 -51.93 -0.42 -0.51 16 47 H 0.07 -0.09 8.14 -51.93 -0.42 -0.52 16 LS Contribution 387.38 15.07 5.84 5.84 Total: 0.00 -10.36 387.38 -10.83 -21.20 By element: Atomic # 1 Polarization: -6.82 SS G_CDS: -7.20 Total: -14.02 kcal Atomic # 6 Polarization: 0.73 SS G_CDS: -3.01 Total: -2.28 kcal Atomic # 7 Polarization: 1.22 SS G_CDS: -0.32 Total: 0.91 kcal Atomic # 8 Polarization: -4.74 SS G_CDS: -1.07 Total: -5.81 kcal Atomic # 14 Polarization: -0.76 SS G_CDS: -5.07 Total: -5.83 kcal Total LS contribution 5.84 Total: 5.84 kcal Total: -10.36 -10.83 -21.20 kcal The number of atoms in the molecule is 47 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17850112_2989410.mol2 47 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -13.431 kcal (2) G-P(sol) polarization free energy of solvation -10.363 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -23.794 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.834 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.197 kcal (6) G-S(sol) free energy of system = (1) + (5) -34.628 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.89 seconds