Wall clock time and date at job start Sun Mar 7 2021 08:26:14 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.17400 * 1 3 3 C 1.47196 * 179.97438 * 2 1 4 4 H 1.09002 * 109.47455 * 332.61567 * 3 2 1 5 5 C 1.52998 * 109.47370 * 92.61613 * 3 2 1 6 6 C 1.52994 * 109.47489 * 179.97438 * 5 3 2 7 7 C 1.52998 * 109.47639 * 300.00431 * 6 5 3 8 8 H 1.09002 * 109.46592 * 299.99979 * 7 6 5 9 9 C 1.52994 * 109.47668 * 179.97438 * 7 6 5 10 10 N 1.46497 * 109.47544 * 174.99880 * 9 7 6 11 11 C 1.34773 * 120.00243 * 180.02562 * 10 9 7 12 12 O 1.21284 * 120.00280 * 359.97438 * 11 10 9 13 13 C 1.50697 * 120.00225 * 180.02562 * 11 10 9 14 14 C 1.52994 * 109.47525 * 179.97438 * 13 11 10 15 15 O 1.42905 * 109.47453 * 179.97438 * 14 13 11 16 16 C 1.35901 * 117.00063 * 180.02562 * 15 14 13 17 17 C 1.38713 * 120.05607 * 179.97438 * 16 15 14 18 18 C 1.38165 * 119.94238 * 179.97438 * 17 16 15 19 19 C 1.50699 * 119.96726 * 180.02562 * 18 17 16 20 20 O 1.42894 * 109.47399 * 64.99941 * 19 18 17 21 21 Si 1.86305 * 109.46829 * 185.00129 * 19 18 17 22 22 C 1.38245 * 120.05717 * 359.97438 * 18 17 16 23 23 C 1.38286 * 120.11203 * 0.02562 * 22 18 17 24 24 C 1.38119 * 120.05454 * 359.97438 * 23 22 18 25 25 C 1.52998 * 109.47032 * 59.99289 * 7 6 5 26 26 C 1.52996 * 109.47649 * 300.00448 * 25 7 6 27 27 H 4.18748 * 15.03866 * 359.97438 * 4 2 1 28 28 H 1.08999 * 109.47070 * 60.00092 * 5 3 2 29 29 H 1.08999 * 109.47525 * 300.00208 * 5 3 2 30 30 H 1.09001 * 109.47362 * 179.97438 * 6 5 3 31 31 H 1.09007 * 109.47084 * 60.00547 * 6 5 3 32 32 H 1.09007 * 109.47128 * 54.99899 * 9 7 6 33 33 H 1.09003 * 109.47267 * 295.00368 * 9 7 6 34 34 H 0.97005 * 119.99769 * 359.97438 * 10 9 7 35 35 H 1.08997 * 109.47527 * 59.99401 * 13 11 10 36 36 H 1.09003 * 109.47084 * 299.99878 * 13 11 10 37 37 H 1.09007 * 109.47128 * 59.99820 * 14 13 11 38 38 H 1.08998 * 109.47282 * 299.99808 * 14 13 11 39 39 H 1.07994 * 120.02419 * 0.25672 * 17 16 15 40 40 H 1.09005 * 109.47415 * 304.99564 * 19 18 17 41 41 H 0.96705 * 113.99954 * 60.00047 * 20 19 18 42 42 H 1.48506 * 109.99755 * 179.97438 * 21 19 18 43 43 H 1.48499 * 109.99993 * 301.31654 * 21 19 18 44 44 H 1.07999 * 119.94068 * 179.97438 * 22 18 17 45 45 H 1.08000 * 119.97222 * 180.02562 * 23 22 18 46 46 H 1.08010 * 120.02819 * 180.02562 * 24 23 22 47 47 H 1.09002 * 109.46869 * 60.00859 * 25 7 6 48 48 H 1.09003 * 109.47285 * 179.97438 * 25 7 6 49 49 H 1.09002 * 109.47321 * 300.00135 * 26 25 7 50 50 H 1.08996 * 109.47525 * 179.97438 * 26 25 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.1740 0.0000 0.0000 3 6 2.6460 0.0007 0.0000 4 1 3.0098 -0.9117 0.4727 5 6 3.1560 0.0667 -1.4410 6 6 4.6859 0.0681 -1.4410 7 6 5.1950 1.2835 -0.6636 8 1 4.8309 2.1957 -1.1364 9 6 6.7249 1.2845 -0.6630 10 7 7.2123 2.5088 -0.0229 11 6 8.5372 2.7281 0.0912 12 8 9.3260 1.9117 -0.3357 13 6 9.0386 3.9872 0.7501 14 6 10.5685 3.9882 0.7506 15 8 11.0440 5.1825 1.3749 16 6 12.3911 5.3414 1.4573 17 6 12.9217 6.4775 2.0506 18 6 14.2917 6.6364 2.1336 19 6 14.8687 7.8701 2.7785 20 8 14.5252 7.8876 4.1655 21 14 16.7229 7.8557 2.5980 22 6 15.1335 5.6641 1.6264 23 6 14.6070 4.5306 1.0345 24 6 13.2382 4.3671 0.9491 25 6 4.6850 1.2174 0.7774 26 6 3.1550 1.2162 0.7774 27 1 -1.0500 -0.0005 0.0008 28 1 2.7923 0.9791 -1.9136 29 1 2.7931 -0.7990 -1.9950 30 1 5.0493 0.1147 -2.4676 31 1 5.0501 -0.8442 -0.9682 32 1 7.0887 1.2417 -1.6897 33 1 7.0887 0.4170 -0.1123 34 1 6.5815 3.1620 0.3182 35 1 8.6753 4.0294 1.7769 36 1 8.6745 4.8549 0.2001 37 1 10.9322 3.9459 -0.2762 38 1 10.9323 3.1206 1.3009 39 1 12.2645 7.2349 2.4514 40 1 14.4633 8.7577 2.2926 41 1 14.8543 7.1257 4.6618 42 1 17.3041 9.0677 3.2296 43 1 17.2851 6.6346 3.2288 44 1 16.2040 5.7905 1.6919 45 1 15.2668 3.7723 0.6394 46 1 12.8275 3.4814 0.4870 47 1 5.0491 0.3053 1.2502 48 1 5.0480 2.0832 1.3314 49 1 2.7909 2.1283 0.3046 50 1 2.7917 1.1687 1.8040 There are 64 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 64 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_17850112_4549614.mol2 50 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 08:26:14 Heat of formation + Delta-G solvation = -42.782091 kcal Electronic energy + Delta-G solvation = -28231.502258 eV Core-core repulsion = 24191.244946 eV Total energy + Delta-G solvation = -4040.257312 eV No. of doubly occupied orbitals = 64 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 344.182 amu Computer time = 1.26 seconds Orbital eigenvalues (eV) -41.41996 -40.91930 -39.86656 -39.13974 -37.39102 -36.36976 -34.26465 -33.31953 -32.49514 -31.79525 -31.48306 -30.72032 -27.45037 -26.83949 -25.02516 -23.71150 -23.68244 -22.77966 -22.03796 -21.44920 -20.75731 -19.38145 -19.03281 -18.22518 -17.72306 -17.52179 -17.19171 -17.11205 -16.74137 -16.50214 -16.18225 -16.03717 -15.60685 -15.49426 -15.21631 -15.03048 -14.90029 -14.62983 -14.42389 -14.17799 -14.12835 -13.80481 -13.60804 -13.22575 -13.21747 -13.12997 -12.93621 -12.84743 -12.42886 -12.40220 -12.09010 -11.96311 -11.81852 -11.69538 -11.56560 -11.56175 -11.50475 -11.06988 -10.92886 -10.78429 -10.65389 -10.13729 -9.95990 -9.28141 -4.89806 0.19095 0.38635 1.29859 1.53062 1.62151 1.72136 1.86405 1.88692 1.96883 2.51544 2.65056 3.34392 3.41762 3.56251 3.64581 3.70234 3.76591 3.78466 3.84504 3.88840 3.98336 4.09029 4.14255 4.22788 4.27380 4.28669 4.36892 4.40819 4.45659 4.46702 4.53967 4.54523 4.63500 4.65467 4.69670 4.75470 4.77194 4.86425 4.94988 4.97511 5.11411 5.14892 5.20075 5.21436 5.25345 5.28892 5.34936 5.37413 5.39924 5.43398 5.52805 5.69790 6.32355 6.46197 6.47182 6.68764 7.15592 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.218 4.218 2 C -0.209 4.209 3 C 0.016 3.984 4 H 0.093 0.907 5 C -0.105 4.105 6 C -0.110 4.110 7 C -0.090 4.090 8 H 0.088 0.912 9 C 0.125 3.875 10 N -0.714 5.714 11 C 0.518 3.482 12 O -0.585 6.585 13 C -0.133 4.133 14 C 0.074 3.926 15 O -0.324 6.324 16 C 0.117 3.883 17 C -0.140 4.140 18 C -0.081 4.081 19 C -0.087 4.087 20 O -0.548 6.548 21 Si 0.775 3.225 22 C -0.158 4.158 23 C -0.076 4.076 24 C -0.211 4.211 25 C -0.111 4.111 26 C -0.106 4.106 27 H 0.237 0.763 28 H 0.065 0.935 29 H 0.064 0.936 30 H 0.074 0.926 31 H 0.070 0.930 32 H 0.061 0.939 33 H 0.060 0.940 34 H 0.417 0.583 35 H 0.125 0.875 36 H 0.126 0.874 37 H 0.066 0.934 38 H 0.064 0.936 39 H 0.128 0.872 40 H 0.125 0.875 41 H 0.386 0.614 42 H -0.302 1.302 43 H -0.280 1.280 44 H 0.147 0.853 45 H 0.152 0.848 46 H 0.136 0.864 47 H 0.066 0.934 48 H 0.079 0.921 49 H 0.067 0.933 50 H 0.064 0.936 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.206 0.033 -1.990 2.971 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.234 4.234 2 C -0.209 4.209 3 C -0.002 4.002 4 H 0.111 0.889 5 C -0.142 4.142 6 C -0.148 4.148 7 C -0.108 4.108 8 H 0.107 0.893 9 C 0.001 3.999 10 N -0.367 5.367 11 C 0.306 3.694 12 O -0.466 6.466 13 C -0.173 4.173 14 C -0.001 4.001 15 O -0.238 6.238 16 C 0.072 3.928 17 C -0.159 4.159 18 C -0.081 4.081 19 C -0.195 4.195 20 O -0.356 6.356 21 Si 0.680 3.320 22 C -0.176 4.176 23 C -0.093 4.093 24 C -0.229 4.229 25 C -0.149 4.149 26 C -0.143 4.143 27 H 0.253 0.747 28 H 0.084 0.916 29 H 0.083 0.917 30 H 0.093 0.907 31 H 0.089 0.911 32 H 0.079 0.921 33 H 0.079 0.921 34 H 0.255 0.745 35 H 0.143 0.857 36 H 0.144 0.856 37 H 0.084 0.916 38 H 0.082 0.918 39 H 0.146 0.854 40 H 0.143 0.857 41 H 0.235 0.765 42 H -0.230 1.230 43 H -0.207 1.207 44 H 0.164 0.836 45 H 0.170 0.830 46 H 0.154 0.846 47 H 0.085 0.915 48 H 0.097 0.903 49 H 0.086 0.914 50 H 0.083 0.917 Dipole moment (debyes) X Y Z Total from point charges -1.359 0.111 -2.001 2.422 hybrid contribution -1.166 -0.618 1.096 1.715 sum -2.525 -0.507 -0.906 2.730 Atomic orbital electron populations 1.25687 0.97004 1.00499 1.00257 1.23705 0.95358 1.00898 1.00973 1.18474 0.83423 1.00443 0.97819 0.88928 1.21482 0.95667 1.02601 0.94461 1.21493 0.94374 0.97965 1.00947 1.21354 0.92264 1.00262 0.96952 0.89340 1.21401 0.94143 0.86665 0.97659 1.45886 1.06521 1.23659 1.60596 1.20595 0.82700 0.87615 0.78523 1.90740 1.56387 1.48700 1.50759 1.21438 0.93907 0.96922 1.05025 1.22441 0.94543 0.85309 0.97844 1.85954 1.19258 1.42504 1.76119 1.19149 0.82404 0.94936 0.96357 1.20338 0.95110 0.97316 1.03157 1.20151 0.92827 0.96736 0.98430 1.25341 1.13202 0.98333 0.82609 1.86576 1.79112 1.50069 1.19868 0.93864 0.71304 0.76357 0.90438 1.21206 1.00200 0.94604 1.01589 1.21237 0.94331 0.97534 0.96240 1.21555 0.95008 1.00471 1.05886 1.21607 0.94222 1.03196 0.95842 1.21503 0.95887 0.96932 0.99981 0.74687 0.91591 0.91717 0.90710 0.91116 0.92108 0.92146 0.74510 0.85667 0.85557 0.91580 0.91792 0.85377 0.85705 0.76454 1.23034 1.20656 0.83618 0.83037 0.84585 0.91519 0.90251 0.91417 0.91707 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.22 -0.41 19.25 74.32 1.43 1.02 16 2 C -0.21 -0.59 12.56 31.12 0.39 -0.19 16 3 C 0.02 -0.03 2.57 -12.60 -0.03 -0.06 16 4 H 0.09 -0.21 8.14 -2.39 -0.02 -0.22 16 5 C -0.10 0.35 5.16 30.59 0.16 0.51 16 6 C -0.11 0.62 5.20 30.59 0.16 0.78 16 7 C -0.09 0.63 2.23 -10.80 -0.02 0.60 16 8 H 0.09 -0.71 8.14 -2.39 -0.02 -0.73 16 9 C 0.12 -0.45 5.06 86.38 0.44 -0.01 16 10 N -0.71 3.56 5.28 -463.07 -2.45 1.11 16 11 C 0.52 0.20 7.83 87.66 0.69 0.88 16 12 O -0.59 -5.64 15.98 -3.04 -0.05 -5.69 16 13 C -0.13 0.54 6.07 29.85 0.18 0.72 16 14 C 0.07 0.10 4.03 71.98 0.29 0.39 16 15 O -0.32 -1.48 10.14 -92.44 -0.94 -2.42 16 16 C 0.12 0.63 6.69 22.51 0.15 0.78 16 17 C -0.14 -0.69 9.62 22.37 0.22 -0.47 16 18 C -0.08 -0.16 5.35 -19.88 -0.11 -0.27 16 19 C -0.09 -0.05 2.80 71.24 0.20 0.15 16 20 O -0.55 -2.08 12.83 -148.98 -1.91 -3.99 16 21 Si 0.78 -1.35 29.88 68.60 2.05 0.70 16 22 C -0.16 0.00 8.67 22.28 0.19 0.19 16 23 C -0.08 -0.03 10.04 22.25 0.22 0.19 16 24 C -0.21 -0.67 9.04 22.37 0.20 -0.47 16 25 C -0.11 0.79 5.08 30.59 0.16 0.94 16 26 C -0.11 0.46 5.16 30.60 0.16 0.62 16 27 H 0.24 -1.01 7.80 -4.42 -0.03 -1.04 16 28 H 0.07 -0.18 8.14 -2.39 -0.02 -0.20 16 29 H 0.06 -0.14 8.14 -2.39 -0.02 -0.16 16 30 H 0.07 -0.43 8.14 -2.39 -0.02 -0.45 16 31 H 0.07 -0.38 8.14 -2.38 -0.02 -0.40 16 32 H 0.06 -0.06 8.14 -2.38 -0.02 -0.08 16 33 H 0.06 -0.06 8.14 -2.39 -0.02 -0.08 16 34 H 0.42 -4.51 7.66 -92.70 -0.71 -5.22 16 35 H 0.13 -0.94 8.14 -2.39 -0.02 -0.96 16 36 H 0.13 -0.97 8.14 -2.39 -0.02 -0.99 16 37 H 0.07 0.17 7.62 -2.38 -0.02 0.15 16 38 H 0.06 0.18 7.62 -2.39 -0.02 0.16 16 39 H 0.13 0.65 8.06 -2.91 -0.02 0.63 16 40 H 0.13 -0.12 7.96 -2.38 -0.02 -0.14 16 41 H 0.39 -0.71 8.70 -74.05 -0.64 -1.35 16 42 H -0.30 -1.76 7.11 99.48 0.71 -1.05 16 43 H -0.28 -0.44 7.01 99.48 0.70 0.26 16 44 H 0.15 -0.60 4.83 -2.91 -0.01 -0.61 16 45 H 0.15 -0.67 8.06 -2.91 -0.02 -0.69 16 46 H 0.14 0.24 6.30 -2.91 -0.02 0.22 16 47 H 0.07 -0.39 8.14 -2.39 -0.02 -0.41 16 48 H 0.08 -0.74 7.18 -2.39 -0.02 -0.76 16 49 H 0.07 -0.27 8.14 -2.39 -0.02 -0.29 16 50 H 0.06 -0.21 8.14 -2.39 -0.02 -0.23 16 Total: 0.00 -20.04 408.26 1.39 -18.65 By element: Atomic # 1 Polarization: -14.28 SS G_CDS: -0.39 Total: -14.67 kcal Atomic # 6 Polarization: 1.23 SS G_CDS: 5.07 Total: 6.30 kcal Atomic # 7 Polarization: 3.56 SS G_CDS: -2.45 Total: 1.11 kcal Atomic # 8 Polarization: -9.20 SS G_CDS: -2.90 Total: -12.10 kcal Atomic # 14 Polarization: -1.35 SS G_CDS: 2.05 Total: 0.70 kcal Total: -20.04 1.39 -18.65 kcal The number of atoms in the molecule is 50 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17850112_4549614.mol2 50 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -24.128 kcal (2) G-P(sol) polarization free energy of solvation -20.040 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -44.167 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.385 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.654 kcal (6) G-S(sol) free energy of system = (1) + (5) -42.782 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.26 seconds