Wall clock time and date at job start Sun Mar 7 2021 08:26:55 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.17398 * 1 3 3 C 1.47199 * 179.97438 * 2 1 4 4 H 1.09000 * 109.47322 * 100.32018 * 3 2 1 5 5 C 1.53000 * 109.46894 * 220.31240 * 3 2 1 6 6 C 1.53005 * 109.47305 * 180.02562 * 5 3 2 7 7 C 1.53000 * 109.47167 * 300.00623 * 6 5 3 8 8 H 1.09000 * 109.47090 * 300.00046 * 7 6 5 9 9 C 1.52997 * 109.47260 * 179.97438 * 7 6 5 10 10 N 1.46496 * 109.47194 * 64.99617 * 9 7 6 11 11 C 1.34777 * 120.00271 * 179.97438 * 10 9 7 12 12 O 1.21278 * 119.99854 * 0.02562 * 11 10 9 13 13 C 1.50703 * 120.00161 * 180.02562 * 11 10 9 14 14 O 1.42898 * 109.47171 * 180.02562 * 13 11 10 15 15 C 1.35979 * 117.00163 * 179.97438 * 14 13 11 16 16 C 1.38678 * 120.00107 * 179.72429 * 15 14 13 17 17 C 1.50703 * 119.99918 * 0.02562 * 16 15 14 18 18 O 1.42902 * 109.46860 * 285.00059 * 17 16 15 19 19 Si 1.86305 * 109.47085 * 165.00044 * 17 16 15 20 20 C 1.38152 * 119.99645 * 179.74677 * 16 15 14 21 21 C 1.38670 * 120.00207 * 0.50472 * 20 16 15 22 22 O 1.35988 * 119.99698 * 179.74675 * 21 20 16 23 23 C 1.42902 * 116.99538 * 180.02562 * 22 21 20 24 24 C 1.38714 * 120.00074 * 359.77170 * 21 20 16 25 25 C 1.38113 * 120.00104 * 359.97438 * 24 21 20 26 26 C 1.53000 * 109.47517 * 59.99507 * 7 6 5 27 27 C 1.53000 * 109.47408 * 340.31759 * 3 2 1 28 28 H 4.18740 * 15.03912 * 359.97438 * 4 2 1 29 29 H 1.08994 * 109.47556 * 300.00237 * 5 3 2 30 30 H 1.09000 * 109.46950 * 60.00564 * 5 3 2 31 31 H 1.09001 * 109.47315 * 180.02562 * 6 5 3 32 32 H 1.09000 * 109.46692 * 60.00362 * 6 5 3 33 33 H 1.09002 * 109.47045 * 304.99744 * 9 7 6 34 34 H 1.09001 * 109.47375 * 184.99669 * 9 7 6 35 35 H 0.97005 * 120.00266 * 0.02562 * 10 9 7 36 36 H 1.09002 * 109.47152 * 60.00245 * 13 11 10 37 37 H 1.09001 * 109.46980 * 300.00345 * 13 11 10 38 38 H 1.09001 * 109.47168 * 44.99800 * 17 16 15 39 39 H 0.96706 * 113.99659 * 180.02562 * 18 17 16 40 40 H 1.48504 * 109.99615 * 298.68187 * 19 17 16 41 41 H 1.48499 * 109.99958 * 60.00053 * 19 17 16 42 42 H 1.08002 * 119.99600 * 180.23366 * 20 16 15 43 43 H 1.09003 * 109.47501 * 300.00071 * 23 22 21 44 44 H 1.09005 * 109.47570 * 60.00049 * 23 22 21 45 45 H 1.09006 * 109.47170 * 179.97438 * 23 22 21 46 46 H 1.08006 * 120.00302 * 179.97438 * 24 21 20 47 47 H 1.08003 * 119.99972 * 179.97438 * 25 24 21 48 48 H 1.09000 * 109.46950 * 59.99889 * 26 7 6 49 49 H 1.08994 * 109.47556 * 180.02562 * 26 7 6 50 50 H 1.08993 * 109.47427 * 60.00271 * 27 3 2 51 51 H 1.09001 * 109.46578 * 299.99834 * 27 3 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.1740 0.0000 0.0000 3 6 2.6460 0.0007 0.0000 4 1 3.0093 0.1849 -1.0110 5 6 3.1554 1.1008 0.9332 6 6 4.6855 1.1020 0.9328 7 6 5.1967 -0.2559 1.4183 8 1 4.8338 -0.4404 2.4294 9 6 6.7266 -0.2549 1.4173 10 7 7.2150 0.7166 2.3989 11 6 8.5401 0.8903 2.5735 12 8 9.3282 0.2426 1.9176 13 6 9.0425 1.8893 3.5838 14 8 10.4715 1.8903 3.5828 15 6 11.0889 2.7427 4.4438 16 6 12.4738 2.7906 4.4984 17 6 13.2945 1.8983 3.6032 18 8 13.2571 0.5595 4.1016 19 14 15.0571 2.5009 3.5732 20 6 13.1009 3.6604 5.3694 21 6 12.3457 4.4781 6.1965 22 8 12.9632 5.3306 7.0575 23 6 12.1233 6.1429 7.8800 24 6 10.9605 4.4261 6.1459 25 6 10.3334 3.5603 5.2714 26 6 4.6872 -1.3561 0.4851 27 6 3.1567 -1.3573 0.4858 28 1 -1.0500 -0.0005 0.0001 29 1 2.7917 2.0682 0.5871 30 1 2.7922 0.9166 1.9443 31 1 5.0484 1.8855 1.5980 32 1 5.0483 1.2865 -0.0783 33 1 7.0891 0.0168 0.4259 34 1 7.0908 -1.2488 1.6775 35 1 6.5847 1.2345 2.9239 36 1 8.6797 1.6175 4.5751 37 1 8.6786 2.8834 3.3237 38 1 12.8853 1.9215 2.5932 39 1 13.7656 -0.0711 3.5735 40 1 15.1129 3.8807 3.0270 41 1 15.6265 2.4740 4.9444 42 1 14.1795 3.7004 5.4093 43 1 11.4930 6.7696 7.2489 44 1 11.4948 5.5041 8.5007 45 1 12.7411 6.7746 8.5184 46 1 10.3722 5.0627 6.7903 47 1 9.2548 3.5196 5.2323 48 1 5.0501 -1.1716 -0.5261 49 1 5.0510 -2.3235 0.8312 50 1 2.7938 -2.1410 -0.1790 51 1 2.7934 -1.5414 1.4969 There are 67 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 67 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_17850112_4974302.mol2 51 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 08:26:55 Heat of formation + Delta-G solvation = -65.847724 kcal Electronic energy + Delta-G solvation = -31410.983503 eV Core-core repulsion = 27051.043798 eV Total energy + Delta-G solvation = -4359.939705 eV No. of doubly occupied orbitals = 67 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 360.182 amu Computer time = 1.69 seconds Orbital eigenvalues (eV) -41.85804 -41.01355 -40.14184 -39.60189 -38.12033 -37.04331 -36.33536 -34.25448 -33.03086 -31.87685 -31.73023 -31.01015 -29.49976 -28.08966 -26.64064 -26.61319 -23.92877 -23.63578 -22.74482 -22.38735 -21.65515 -20.79474 -19.48009 -19.02495 -18.74204 -18.55023 -18.44022 -17.60037 -17.44224 -16.90984 -16.74123 -16.35881 -16.08952 -15.93019 -15.59979 -15.51255 -15.41117 -15.29548 -15.15996 -14.84677 -14.58927 -14.10441 -14.02206 -13.93079 -13.73765 -13.62717 -13.52557 -13.20739 -13.16629 -13.11253 -12.61993 -12.56308 -12.41769 -12.07918 -12.05649 -11.82143 -11.67009 -11.55528 -11.51207 -11.49489 -11.01045 -10.91220 -10.77511 -10.30727 -10.23276 -10.17410 -8.91496 -4.99620 -0.08095 0.23295 1.25758 1.46565 1.48106 1.59676 1.87220 1.89519 1.91050 2.21027 2.41749 2.59266 3.34983 3.39813 3.50674 3.61836 3.71206 3.76957 3.78739 3.81212 3.94087 3.98575 4.04354 4.06543 4.15297 4.15651 4.29321 4.30815 4.33412 4.33784 4.38332 4.46706 4.47420 4.55098 4.56672 4.67705 4.68332 4.75177 4.86496 4.89288 4.95783 5.02086 5.07909 5.12554 5.15309 5.21235 5.22391 5.29027 5.30457 5.33650 5.39088 5.53542 6.10459 6.31286 6.46509 6.69539 6.87343 7.13605 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.219 4.219 2 C -0.209 4.209 3 C 0.016 3.984 4 H 0.092 0.908 5 C -0.105 4.105 6 C -0.111 4.111 7 C -0.089 4.089 8 H 0.090 0.910 9 C 0.127 3.873 10 N -0.708 5.708 11 C 0.513 3.487 12 O -0.569 6.569 13 C 0.032 3.968 14 O -0.304 6.304 15 C 0.105 3.895 16 C -0.090 4.090 17 C -0.073 4.073 18 O -0.560 6.560 19 Si 0.779 3.221 20 C -0.143 4.143 21 C 0.086 3.914 22 O -0.341 6.341 23 C 0.017 3.983 24 C -0.156 4.156 25 C -0.160 4.160 26 C -0.111 4.111 27 C -0.104 4.104 28 H 0.236 0.764 29 H 0.065 0.935 30 H 0.068 0.932 31 H 0.081 0.919 32 H 0.066 0.934 33 H 0.061 0.939 34 H 0.059 0.941 35 H 0.419 0.581 36 H 0.121 0.879 37 H 0.126 0.874 38 H 0.075 0.925 39 H 0.399 0.601 40 H -0.287 1.287 41 H -0.288 1.288 42 H 0.124 0.876 43 H 0.070 0.930 44 H 0.069 0.931 45 H 0.115 0.885 46 H 0.167 0.833 47 H 0.174 0.826 48 H 0.070 0.930 49 H 0.073 0.927 50 H 0.063 0.937 51 H 0.066 0.934 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -5.986 2.519 1.197 6.604 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.235 4.235 2 C -0.209 4.209 3 C -0.002 4.002 4 H 0.110 0.890 5 C -0.143 4.143 6 C -0.149 4.149 7 C -0.107 4.107 8 H 0.109 0.891 9 C 0.004 3.996 10 N -0.363 5.363 11 C 0.299 3.701 12 O -0.447 6.447 13 C -0.045 4.045 14 O -0.217 6.217 15 C 0.059 3.941 16 C -0.091 4.091 17 C -0.183 4.183 18 O -0.369 6.369 19 Si 0.684 3.316 20 C -0.161 4.161 21 C 0.041 3.959 22 O -0.256 6.256 23 C -0.077 4.077 24 C -0.175 4.175 25 C -0.178 4.178 26 C -0.149 4.149 27 C -0.142 4.142 28 H 0.253 0.747 29 H 0.084 0.916 30 H 0.087 0.913 31 H 0.100 0.900 32 H 0.085 0.915 33 H 0.079 0.921 34 H 0.078 0.922 35 H 0.257 0.743 36 H 0.139 0.861 37 H 0.143 0.857 38 H 0.093 0.907 39 H 0.249 0.751 40 H -0.214 1.214 41 H -0.216 1.216 42 H 0.142 0.858 43 H 0.089 0.911 44 H 0.088 0.912 45 H 0.133 0.867 46 H 0.185 0.815 47 H 0.192 0.808 48 H 0.089 0.911 49 H 0.092 0.908 50 H 0.082 0.918 51 H 0.085 0.915 Dipole moment (debyes) X Y Z Total from point charges -4.956 2.813 1.345 5.855 hybrid contribution -1.339 0.404 0.380 1.449 sum -6.295 3.217 1.725 7.277 Atomic orbital electron populations 1.25677 0.96999 1.00228 1.00608 1.23705 0.95353 1.00959 1.00839 1.18479 0.83396 0.97129 1.01195 0.88952 1.21502 0.95854 0.97493 0.99408 1.21619 0.94222 0.96592 1.02448 1.21356 0.91930 0.96182 1.01259 0.89136 1.21414 0.94257 0.92031 0.91945 1.45693 1.05677 1.42874 1.42067 1.20425 0.83041 0.83270 0.83406 1.90763 1.56574 1.48699 1.48671 1.22771 0.80019 1.01005 1.00749 1.86181 1.20342 1.58037 1.57152 1.18756 0.91277 0.91908 0.92128 1.18694 0.91708 0.99122 0.99597 1.24732 1.10204 0.85939 0.97379 1.86438 1.76894 1.17424 1.56168 0.94389 0.76227 0.80685 0.80272 1.20126 0.99456 0.98658 0.97890 1.18922 0.91950 0.92652 0.92412 1.86073 1.37441 1.51470 1.50618 1.23394 0.96404 0.94064 0.93875 1.21433 0.92316 1.01892 1.01814 1.21479 1.01860 0.97291 0.97155 1.21507 0.94406 0.98731 1.00207 1.21492 0.95594 0.95291 1.01818 0.74738 0.91641 0.91322 0.90013 0.91517 0.92085 0.92214 0.74292 0.86144 0.85679 0.90653 0.75064 1.21410 1.21580 0.85821 0.91099 0.91248 0.86697 0.81533 0.80829 0.91112 0.90783 0.91785 0.91529 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.22 -0.33 19.25 74.32 1.43 1.10 16 2 C -0.21 -0.49 12.56 31.13 0.39 -0.10 16 3 C 0.02 -0.04 2.56 -12.60 -0.03 -0.07 16 4 H 0.09 -0.24 8.14 -2.39 -0.02 -0.26 16 5 C -0.11 0.55 5.16 30.60 0.16 0.70 16 6 C -0.11 0.89 5.08 30.60 0.16 1.04 16 7 C -0.09 0.66 2.23 -10.79 -0.02 0.63 16 8 H 0.09 -0.79 8.14 -2.39 -0.02 -0.81 16 9 C 0.13 -0.42 5.06 86.38 0.44 0.02 16 10 N -0.71 3.47 5.28 -463.07 -2.45 1.02 16 11 C 0.51 1.42 7.91 87.66 0.69 2.11 16 12 O -0.57 -8.15 16.50 16.01 0.26 -7.88 16 13 C 0.03 -0.07 5.22 71.24 0.37 0.30 16 14 O -0.30 -2.42 9.00 -74.28 -0.67 -3.08 16 15 C 0.10 0.77 6.66 22.49 0.15 0.92 16 16 C -0.09 -0.95 5.31 -19.78 -0.10 -1.06 16 17 C -0.07 -0.56 2.36 71.24 0.17 -0.39 16 18 O -0.56 -4.63 12.86 -148.98 -1.92 -6.54 16 19 Si 0.78 2.95 30.19 68.60 2.07 5.02 16 20 C -0.14 -1.57 8.59 22.35 0.19 -1.38 16 21 C 0.09 0.66 6.68 22.49 0.15 0.81 16 22 O -0.34 -2.40 10.50 -93.42 -0.98 -3.38 16 23 C 0.02 -0.05 9.81 113.37 1.11 1.06 16 24 C -0.16 -0.22 9.03 22.35 0.20 -0.02 16 25 C -0.16 -0.09 9.03 22.35 0.20 0.11 16 26 C -0.11 0.63 5.20 30.61 0.16 0.79 16 27 C -0.10 0.38 5.16 30.61 0.16 0.54 16 28 H 0.24 -1.08 7.80 -4.42 -0.03 -1.11 16 29 H 0.06 -0.28 8.14 -2.39 -0.02 -0.30 16 30 H 0.07 -0.35 8.14 -2.39 -0.02 -0.37 16 31 H 0.08 -0.88 7.18 -2.39 -0.02 -0.90 16 32 H 0.07 -0.44 8.14 -2.39 -0.02 -0.45 16 33 H 0.06 -0.03 8.14 -2.39 -0.02 -0.05 16 34 H 0.06 -0.01 8.14 -2.39 -0.02 -0.03 16 35 H 0.42 -5.11 7.65 -92.70 -0.71 -5.82 16 36 H 0.12 -0.97 7.66 -2.39 -0.02 -0.98 16 37 H 0.13 -1.15 7.66 -2.39 -0.02 -1.17 16 38 H 0.08 0.55 7.82 -2.39 -0.02 0.53 16 39 H 0.40 -0.76 8.74 -74.05 -0.65 -1.40 16 40 H -0.29 -2.54 7.11 99.48 0.71 -1.84 16 41 H -0.29 -2.86 6.75 99.48 0.67 -2.19 16 42 H 0.12 1.48 4.90 -2.91 -0.01 1.47 16 43 H 0.07 -0.41 7.66 -2.39 -0.02 -0.43 16 44 H 0.07 -0.38 7.66 -2.38 -0.02 -0.40 16 45 H 0.11 -0.66 8.14 -2.38 -0.02 -0.68 16 46 H 0.17 -0.91 6.29 -2.91 -0.02 -0.93 16 47 H 0.17 -1.42 6.29 -2.91 -0.02 -1.44 16 48 H 0.07 -0.38 8.14 -2.39 -0.02 -0.40 16 49 H 0.07 -0.42 8.14 -2.39 -0.02 -0.44 16 50 H 0.06 -0.15 8.14 -2.39 -0.02 -0.17 16 51 H 0.07 -0.21 8.14 -2.39 -0.02 -0.23 16 Total: 0.00 -30.40 416.08 1.89 -28.51 By element: Atomic # 1 Polarization: -20.40 SS G_CDS: -0.41 Total: -20.80 kcal Atomic # 6 Polarization: 1.16 SS G_CDS: 5.97 Total: 7.13 kcal Atomic # 7 Polarization: 3.47 SS G_CDS: -2.45 Total: 1.02 kcal Atomic # 8 Polarization: -17.59 SS G_CDS: -3.30 Total: -20.89 kcal Atomic # 14 Polarization: 2.95 SS G_CDS: 2.07 Total: 5.02 kcal Total: -30.40 1.89 -28.51 kcal The number of atoms in the molecule is 51 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17850112_4974302.mol2 51 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -37.336 kcal (2) G-P(sol) polarization free energy of solvation -30.401 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -67.736 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.889 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -28.512 kcal (6) G-S(sol) free energy of system = (1) + (5) -65.848 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.69 seconds