Wall clock time and date at job start Sun Mar 7 2021 08:27:03 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.17399 * 1 3 3 C 1.47197 * 179.97438 * 2 1 4 4 H 1.09001 * 109.47146 * 55.67934 * 3 2 1 5 5 C 1.52996 * 109.47361 * 175.68378 * 3 2 1 6 6 C 1.53001 * 109.47420 * 179.97438 * 5 3 2 7 7 C 1.53001 * 109.46891 * 299.99943 * 6 5 3 8 8 H 1.08997 * 109.47135 * 300.00154 * 7 6 5 9 9 C 1.53001 * 109.46891 * 180.02562 * 7 6 5 10 10 N 1.46496 * 109.47210 * 65.00104 * 9 7 6 11 11 C 1.34772 * 120.00190 * 180.02562 * 10 9 7 12 12 O 1.21700 * 120.00129 * 4.81206 * 11 10 9 13 13 C 1.46676 * 120.00212 * 184.53257 * 11 10 9 14 14 C 1.37878 * 126.22326 * 354.83897 * 13 11 10 15 15 C 1.39882 * 107.08942 * 179.90418 * 14 13 11 16 16 Br 1.89109 * 126.07160 * 180.13844 * 15 14 13 17 17 C 1.35499 * 107.85447 * 0.35937 * 15 14 13 18 18 C 1.50695 * 125.57217 * 179.79387 * 17 15 14 19 19 O 1.42895 * 109.47391 * 235.81414 * 18 17 15 20 20 Si 1.86305 * 109.46979 * 115.81581 * 18 17 15 21 21 N 1.35602 * 108.85736 * 359.78031 * 17 15 14 22 22 C 1.46497 * 125.67539 * 180.02562 * 21 17 15 23 23 C 1.52996 * 109.47198 * 60.00187 * 7 6 5 24 24 C 1.53001 * 109.47047 * 299.99718 * 23 7 6 25 25 H 4.18739 * 15.04002 * 0.02562 * 4 2 1 26 26 H 1.09006 * 109.46776 * 300.00186 * 5 3 2 27 27 H 1.08997 * 109.46888 * 59.99623 * 5 3 2 28 28 H 1.09004 * 109.46760 * 179.97438 * 6 5 3 29 29 H 1.08991 * 109.46938 * 60.00102 * 6 5 3 30 30 H 1.09008 * 109.47163 * 305.00134 * 9 7 6 31 31 H 1.08999 * 109.47079 * 185.00582 * 9 7 6 32 32 H 0.97004 * 120.00182 * 0.02562 * 10 9 7 33 33 H 1.08001 * 126.45821 * 0.03382 * 14 13 11 34 34 H 1.09002 * 109.47299 * 355.82091 * 18 17 15 35 35 H 0.96696 * 114.00576 * 299.99908 * 19 18 17 36 36 H 1.48504 * 109.99976 * 184.99297 * 20 18 17 37 37 H 1.48501 * 110.00161 * 306.31234 * 20 18 17 38 38 H 1.09000 * 109.46887 * 274.34267 * 22 21 17 39 39 H 1.08995 * 109.47871 * 34.34499 * 22 21 17 40 40 H 1.09000 * 109.47174 * 154.34782 * 22 21 17 41 41 H 1.09008 * 109.47349 * 59.99571 * 23 7 6 42 42 H 1.08995 * 109.47589 * 179.97438 * 23 7 6 43 43 H 1.09002 * 109.47331 * 179.97438 * 24 23 7 44 44 H 1.08997 * 109.47356 * 300.00076 * 24 23 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.1740 0.0000 0.0000 3 6 2.6460 0.0007 0.0000 4 1 3.0096 -0.5786 -0.8488 5 6 3.1554 1.4392 -0.1086 6 6 4.6854 1.4400 -0.1079 7 6 5.1951 0.8152 1.1924 8 1 4.8311 1.3945 2.0409 9 6 6.7251 0.8166 1.1933 10 7 7.2122 2.1981 1.2101 11 6 8.5370 2.4455 1.2133 12 8 9.3280 1.5260 1.1139 13 6 9.0255 3.8236 1.3305 14 6 8.2509 4.9642 1.3439 15 6 9.1220 6.0511 1.4730 16 35 8.6241 7.8737 1.5516 17 6 10.3861 5.5662 1.5266 18 6 11.6378 6.3947 1.6601 19 8 12.5253 6.0941 0.5813 20 14 12.4726 6.0022 3.2788 21 7 10.3408 4.2137 1.4409 22 6 11.4991 3.3170 1.4630 23 6 4.6858 -0.6234 1.3010 24 6 3.1558 -0.6241 1.3003 25 1 -1.0500 0.0001 -0.0008 26 1 2.7918 1.8845 -1.0347 27 1 2.7917 2.0184 0.7402 28 1 5.0482 2.4649 -0.1857 29 1 5.0493 0.8607 -0.9564 30 1 7.0894 0.3137 0.2974 31 1 7.0883 0.2924 2.0773 32 1 6.5812 2.9348 1.2189 33 1 7.1744 5.0098 1.2709 34 1 11.3778 7.4529 1.6327 35 1 12.7992 5.1675 0.5437 36 1 13.6408 6.8972 3.4780 37 1 11.5112 6.1651 4.3988 38 1 11.9014 3.2183 0.4547 39 1 12.2646 3.7281 2.1210 40 1 11.1930 2.3371 1.8294 41 1 5.0497 -1.2027 0.4523 42 1 5.0492 -1.0686 2.2270 43 1 2.7928 -1.6491 1.3772 44 1 2.7917 -0.0448 2.1488 There are 59 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 59 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_17850112_5000100.mol2 44 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 08:27:03 Heat of formation + Delta-G solvation = 26.747179 kcal Electronic energy + Delta-G solvation = -26462.276268 eV Core-core repulsion = 22622.236008 eV Total energy + Delta-G solvation = -3840.040259 eV No. of doubly occupied orbitals = 59 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 381.073 amu Computer time = 0.97 seconds Orbital eigenvalues (eV) -42.89181 -40.68309 -39.65870 -37.91750 -36.41559 -34.64135 -34.10684 -32.41078 -31.75988 -31.36536 -30.86567 -27.83860 -27.33474 -26.07320 -23.76164 -23.26021 -22.62172 -21.57331 -21.01283 -20.46049 -19.02441 -18.95644 -18.12885 -17.26813 -17.09881 -16.71627 -16.33645 -16.15701 -15.80191 -15.53001 -15.35438 -15.14111 -14.82742 -14.66686 -14.44295 -14.31598 -14.25182 -13.90775 -13.71479 -13.57292 -13.23302 -13.15262 -13.09722 -12.91961 -12.41102 -12.35846 -12.05889 -11.94718 -11.67560 -11.53431 -11.48678 -11.33259 -11.08626 -10.91558 -10.87760 -10.76344 -10.19152 -9.80894 -9.26987 -5.24158 0.14362 0.60309 0.89631 1.19675 1.44654 1.56032 1.82722 1.88044 1.90377 2.17803 2.30062 3.17251 3.36329 3.39267 3.55979 3.72994 3.75798 3.79516 3.82392 3.88809 4.16896 4.26688 4.30942 4.31436 4.39073 4.41685 4.48395 4.49511 4.56902 4.63000 4.69971 4.72027 4.79170 4.88681 4.97225 5.14307 5.16996 5.22241 5.24090 5.24511 5.30859 5.35932 5.41239 5.55226 5.57014 5.83303 6.40936 6.41951 6.70415 7.06237 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.220 4.220 2 C -0.208 4.208 3 C 0.017 3.983 4 H 0.094 0.906 5 C -0.106 4.106 6 C -0.112 4.112 7 C -0.091 4.091 8 H 0.088 0.912 9 C 0.129 3.871 10 N -0.704 5.704 11 C 0.591 3.409 12 O -0.570 6.570 13 C -0.044 4.044 14 C -0.107 4.107 15 C -0.185 4.185 16 Br -0.029 7.029 17 C 0.049 3.951 18 C -0.055 4.055 19 O -0.541 6.541 20 Si 0.762 3.238 21 N -0.394 5.394 22 C 0.044 3.956 23 C -0.108 4.108 24 C -0.105 4.105 25 H 0.236 0.764 26 H 0.063 0.937 27 H 0.066 0.934 28 H 0.075 0.925 29 H 0.068 0.932 30 H 0.067 0.933 31 H 0.068 0.932 32 H 0.414 0.586 33 H 0.176 0.824 34 H 0.127 0.873 35 H 0.389 0.611 36 H -0.268 1.268 37 H -0.283 1.283 38 H 0.107 0.893 39 H 0.113 0.887 40 H 0.111 0.889 41 H 0.073 0.927 42 H 0.077 0.923 43 H 0.065 0.935 44 H 0.065 0.935 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.286 -3.309 1.058 3.485 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.236 4.236 2 C -0.208 4.208 3 C -0.001 4.001 4 H 0.112 0.888 5 C -0.143 4.143 6 C -0.150 4.150 7 C -0.109 4.109 8 H 0.106 0.894 9 C 0.006 3.994 10 N -0.355 5.355 11 C 0.379 3.621 12 O -0.452 6.452 13 C -0.158 4.158 14 C -0.134 4.134 15 C -0.271 4.271 16 Br 0.055 6.945 17 C -0.073 4.073 18 C -0.164 4.164 19 O -0.349 6.349 20 Si 0.663 3.337 21 N -0.067 5.067 22 C -0.095 4.095 23 C -0.146 4.146 24 C -0.142 4.142 25 H 0.252 0.748 26 H 0.082 0.918 27 H 0.085 0.915 28 H 0.094 0.906 29 H 0.087 0.913 30 H 0.085 0.915 31 H 0.087 0.913 32 H 0.252 0.748 33 H 0.193 0.807 34 H 0.144 0.856 35 H 0.239 0.761 36 H -0.194 1.194 37 H -0.209 1.209 38 H 0.125 0.875 39 H 0.131 0.869 40 H 0.129 0.871 41 H 0.091 0.909 42 H 0.095 0.905 43 H 0.083 0.917 44 H 0.083 0.917 Dipole moment (debyes) X Y Z Total from point charges 0.542 -2.676 1.680 3.206 hybrid contribution -1.194 0.492 -0.408 1.355 sum -0.652 -2.184 1.272 2.610 Atomic orbital electron populations 1.25674 0.97006 1.00387 1.00538 1.23724 0.95384 1.00885 1.00834 1.18481 0.83353 0.98393 0.99912 0.88814 1.21501 0.95920 0.94429 1.02483 1.21612 0.94212 1.01720 0.97410 1.21367 0.92304 0.97959 0.99306 0.89417 1.21472 0.94066 0.81358 1.02467 1.45593 1.05547 1.10316 1.74083 1.16875 0.83237 0.85751 0.76258 1.90801 1.55891 1.46442 1.52036 1.20074 0.83990 0.94127 1.17607 1.21480 1.00158 0.88558 1.03231 1.20963 0.94778 0.91856 1.19456 1.96655 1.92098 1.07655 1.98085 1.20835 0.96749 0.83495 1.06234 1.25038 0.87875 1.00568 1.02964 1.86592 1.64137 1.33901 1.50234 0.94366 0.78541 0.89062 0.71770 1.43869 1.06912 1.04828 1.51086 1.22831 0.85741 0.95064 1.05844 1.21482 0.94227 0.95495 1.03403 1.21490 0.95813 1.00909 0.96032 0.74764 0.91824 0.91515 0.90611 0.91308 0.91508 0.91321 0.74839 0.80689 0.85596 0.76104 1.19399 1.20931 0.87515 0.86933 0.87105 0.90876 0.90462 0.91651 0.91670 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.22 -0.45 19.25 74.32 1.43 0.98 16 2 C -0.21 -0.60 12.56 31.12 0.39 -0.21 16 3 C 0.02 -0.03 2.57 -12.60 -0.03 -0.06 16 4 H 0.09 -0.23 8.14 -2.39 -0.02 -0.25 16 5 C -0.11 0.43 5.16 30.59 0.16 0.58 16 6 C -0.11 0.77 5.08 30.60 0.16 0.92 16 7 C -0.09 0.67 2.22 -10.79 -0.02 0.65 16 8 H 0.09 -0.71 8.14 -2.39 -0.02 -0.73 16 9 C 0.13 -0.59 5.07 86.38 0.44 -0.15 16 10 N -0.70 2.67 5.27 -467.08 -2.46 0.21 16 11 C 0.59 1.11 7.77 86.45 0.67 1.78 16 12 O -0.57 -4.13 14.65 -4.35 -0.06 -4.20 16 13 C -0.04 -0.06 6.88 40.35 0.28 0.22 16 14 C -0.11 -0.06 10.34 22.58 0.23 0.18 16 15 C -0.18 -0.68 6.53 22.03 0.14 -0.53 16 16 Br -0.03 -0.12 33.06 -20.37 -0.67 -0.79 16 17 C 0.05 0.10 5.15 41.34 0.21 0.31 16 18 C -0.05 -0.03 2.87 71.23 0.20 0.18 16 19 O -0.54 0.11 12.88 -148.98 -1.92 -1.81 16 20 Si 0.76 -1.48 30.08 68.60 2.06 0.58 16 21 N -0.39 -0.02 3.12 -519.63 -1.62 -1.64 16 22 C 0.04 -0.27 8.84 127.77 1.13 0.86 16 23 C -0.11 0.70 5.20 30.59 0.16 0.86 16 24 C -0.10 0.40 5.16 30.60 0.16 0.55 16 25 H 0.24 -0.94 7.80 -4.42 -0.03 -0.97 16 26 H 0.06 -0.18 8.14 -2.38 -0.02 -0.20 16 27 H 0.07 -0.24 8.14 -2.39 -0.02 -0.26 16 28 H 0.08 -0.63 7.18 -2.38 -0.02 -0.64 16 29 H 0.07 -0.41 8.14 -2.39 -0.02 -0.43 16 30 H 0.07 -0.16 8.14 -2.38 -0.02 -0.18 16 31 H 0.07 -0.21 8.14 -2.39 -0.02 -0.23 16 32 H 0.41 -3.35 6.55 -92.71 -0.61 -3.96 16 33 H 0.18 -0.88 7.45 -2.91 -0.02 -0.90 16 34 H 0.13 0.33 6.95 -2.39 -0.02 0.31 16 35 H 0.39 -3.24 6.43 -74.06 -0.48 -3.72 16 36 H -0.27 -0.83 7.11 99.48 0.71 -0.13 16 37 H -0.28 -1.30 7.11 99.48 0.71 -0.59 16 38 H 0.11 -0.97 7.76 -2.39 -0.02 -0.99 16 39 H 0.11 -1.38 4.66 -2.39 -0.01 -1.39 16 40 H 0.11 -0.37 6.19 -2.39 -0.01 -0.38 16 41 H 0.07 -0.48 8.14 -2.38 -0.02 -0.50 16 42 H 0.08 -0.54 8.14 -2.39 -0.02 -0.56 16 43 H 0.06 -0.18 8.14 -2.39 -0.02 -0.20 16 44 H 0.06 -0.19 8.14 -2.39 -0.02 -0.21 16 Total: 0.00 -18.67 374.45 1.01 -17.65 By element: Atomic # 1 Polarization: -17.10 SS G_CDS: -0.02 Total: -17.12 kcal Atomic # 6 Polarization: 1.41 SS G_CDS: 5.71 Total: 7.11 kcal Atomic # 7 Polarization: 2.65 SS G_CDS: -4.08 Total: -1.43 kcal Atomic # 8 Polarization: -4.03 SS G_CDS: -1.98 Total: -6.01 kcal Atomic # 14 Polarization: -1.48 SS G_CDS: 2.06 Total: 0.58 kcal Atomic # 35 Polarization: -0.12 SS G_CDS: -0.67 Total: -0.79 kcal Total: -18.67 1.01 -17.65 kcal The number of atoms in the molecule is 44 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17850112_5000100.mol2 44 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 44.398 kcal (2) G-P(sol) polarization free energy of solvation -18.665 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 25.733 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.014 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -17.651 kcal (6) G-S(sol) free energy of system = (1) + (5) 26.747 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.97 seconds