Wall clock time and date at job start Sun Mar 7 2021 08:27:39 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.17402 * 1 3 3 C 1.47207 * 179.97438 * 2 1 4 4 H 1.08997 * 109.46995 * 69.83745 * 3 2 1 5 5 C 1.52996 * 109.47002 * 189.84461 * 3 2 1 6 6 C 1.52997 * 109.47180 * 180.02562 * 5 3 2 7 7 C 1.53000 * 109.46951 * 299.99886 * 6 5 3 8 8 H 1.09004 * 109.47149 * 299.99549 * 7 6 5 9 9 C 1.52997 * 109.46951 * 180.02562 * 7 6 5 10 10 N 1.46500 * 109.46958 * 174.99636 * 9 7 6 11 11 C 1.34785 * 120.00002 * 179.97438 * 10 9 7 12 12 O 1.21275 * 119.99963 * 0.02562 * 11 10 9 13 13 C 1.50704 * 119.99912 * 180.02562 * 11 10 9 14 14 N 1.46501 * 109.47036 * 180.02562 * 13 11 10 15 15 C 1.36831 * 125.06490 * 265.08328 * 14 13 11 16 16 C 1.34231 * 109.93657 * 180.34279 * 15 14 13 17 17 C 1.50706 * 126.49949 * 179.71710 * 16 15 14 18 18 O 1.42903 * 109.46949 * 105.03923 * 17 16 15 19 19 Si 1.86297 * 109.47021 * 345.04042 * 17 16 15 20 20 C 1.46484 * 107.00213 * 359.75218 * 16 15 14 21 21 C 1.39591 * 134.04095 * 180.02562 * 20 16 15 22 22 C 1.36663 * 119.76983 * 179.97438 * 21 20 16 23 23 C 1.38790 * 120.52229 * 359.97438 * 22 21 20 24 24 C 1.37780 * 120.67062 * 359.97438 * 23 22 21 25 25 C 1.37692 * 125.05907 * 84.99675 * 14 13 11 26 26 C 1.52999 * 109.47412 * 59.99909 * 7 6 5 27 27 C 1.52997 * 109.47011 * 300.00352 * 26 7 6 28 28 H 4.18739 * 15.03881 * 0.02562 * 4 2 1 29 29 H 1.09005 * 109.47222 * 59.99681 * 5 3 2 30 30 H 1.09008 * 109.46714 * 299.99937 * 5 3 2 31 31 H 1.09005 * 109.47194 * 179.97438 * 6 5 3 32 32 H 1.09005 * 109.47338 * 59.99710 * 6 5 3 33 33 H 1.09009 * 109.47420 * 55.00304 * 9 7 6 34 34 H 1.08997 * 109.47322 * 294.99883 * 9 7 6 35 35 H 0.96999 * 120.00512 * 0.02562 * 10 9 7 36 36 H 1.08996 * 109.46974 * 60.00310 * 13 11 10 37 37 H 1.08997 * 109.47252 * 300.00364 * 13 11 10 38 38 H 1.08002 * 125.03246 * 0.09206 * 15 14 13 39 39 H 1.08995 * 109.47205 * 225.04285 * 17 16 15 40 40 H 0.96701 * 113.99555 * 180.02562 * 18 17 16 41 41 H 1.48501 * 110.00040 * 298.68136 * 19 17 16 42 42 H 1.48506 * 109.99910 * 59.99928 * 19 17 16 43 43 H 1.08002 * 120.11381 * 359.96172 * 21 20 16 44 44 H 1.07997 * 119.73771 * 180.02562 * 22 21 20 45 45 H 1.07999 * 119.66094 * 180.02562 * 23 22 21 46 46 H 1.07998 * 120.11554 * 180.02562 * 24 23 22 47 47 H 1.08997 * 109.46637 * 59.99986 * 26 7 6 48 48 H 1.08996 * 109.47378 * 180.02562 * 26 7 6 49 49 H 1.09005 * 109.47095 * 299.99690 * 27 26 7 50 50 H 1.08997 * 109.47334 * 180.02562 * 27 26 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.1740 0.0000 0.0000 3 6 2.6461 0.0007 0.0000 4 1 3.0096 -0.3534 -0.9647 5 6 3.1554 1.4221 0.2466 6 6 4.6854 1.4230 0.2460 7 6 5.1963 0.4989 1.3532 8 1 4.8332 0.8527 2.3182 9 6 6.7263 0.5002 1.3530 10 7 7.2154 -0.2888 2.4863 11 6 8.5407 -0.4288 2.6880 12 8 9.3283 0.0987 1.9315 13 6 9.0439 -1.2410 3.8535 14 7 10.5089 -1.2396 3.8534 15 6 11.2958 -2.2091 3.2940 16 6 12.5914 -1.9082 3.4754 17 6 13.7736 -2.7219 3.0154 18 8 14.3714 -2.0935 1.8797 19 14 13.2057 -4.4342 2.5505 20 6 12.6381 -0.6394 4.2060 21 6 13.6721 0.1708 4.6784 22 6 13.3777 1.3284 5.3423 23 6 12.0583 1.7056 5.5505 24 6 11.0224 0.9215 5.0919 25 6 11.2990 -0.2616 4.4149 26 6 4.6870 -0.9226 1.1067 27 6 3.1570 -0.9234 1.1072 28 1 -1.0499 0.0003 -0.0005 29 1 2.7919 1.7761 1.2114 30 1 2.7917 2.0804 -0.5425 31 1 5.0483 2.4358 0.4213 32 1 5.0486 1.0691 -0.7189 33 1 7.0888 1.5245 1.4401 34 1 7.0899 0.0639 0.4227 35 1 6.5856 -0.7110 3.0912 36 1 8.6811 -2.2651 3.7663 37 1 8.6805 -0.8049 4.7840 38 1 10.9290 -3.0885 2.7856 39 1 14.5048 -2.7879 3.8211 40 1 15.1400 -2.5640 1.5292 41 1 12.6108 -5.1102 3.7313 42 1 12.2083 -4.3580 1.4529 43 1 14.7011 -0.1163 4.5198 44 1 14.1780 1.9551 5.7072 45 1 11.8416 2.6235 6.0766 46 1 9.9991 1.2238 5.2585 47 1 5.0502 -1.2764 0.1418 48 1 5.0506 -1.5809 1.8957 49 1 2.7938 -0.5696 2.0722 50 1 2.7941 -1.9362 0.9320 There are 65 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 65 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_17850112_9818708.mol2 50 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 08:27:39 Heat of formation + Delta-G solvation = 42.437181 kcal Electronic energy + Delta-G solvation = -30376.761770 eV Core-core repulsion = 26337.003843 eV Total energy + Delta-G solvation = -4039.757927 eV No. of doubly occupied orbitals = 65 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 353.178 amu Computer time = 1.20 seconds Orbital eigenvalues (eV) -42.47462 -40.92145 -39.89385 -37.95061 -37.50913 -36.40051 -34.39496 -34.03977 -32.00995 -31.83504 -31.15603 -30.17327 -29.11068 -27.00469 -25.44582 -23.94728 -23.65146 -23.04479 -22.43921 -21.67552 -21.00378 -20.43105 -19.12216 -18.61902 -18.22667 -18.13839 -17.65801 -16.86500 -16.65532 -16.33652 -16.30132 -15.79515 -15.62193 -15.41093 -15.38199 -15.15820 -14.81703 -14.73108 -14.64795 -14.35668 -14.11942 -14.01182 -13.80011 -13.51018 -13.47212 -13.36767 -13.15715 -12.63083 -12.55925 -12.44091 -12.35267 -12.30087 -11.90151 -11.81325 -11.76181 -11.65082 -11.63163 -11.08864 -11.00135 -10.90748 -10.41937 -10.23841 -10.09083 -9.02212 -8.53125 -4.96556 0.27333 0.79965 1.36749 1.38978 1.42114 1.66927 1.76195 1.87296 1.90301 2.02908 2.12048 3.10461 3.20968 3.45686 3.46185 3.50361 3.56513 3.61464 3.68698 3.76409 3.82376 3.85895 3.97693 4.09287 4.10614 4.21786 4.24878 4.26621 4.32351 4.33469 4.37083 4.46181 4.50138 4.57602 4.67318 4.70998 4.77687 4.78534 4.88814 4.90710 4.96665 4.98668 4.99410 5.03544 5.14569 5.16109 5.22560 5.25756 5.31785 5.64829 5.80407 5.85920 5.89561 6.14587 6.30673 6.37290 6.68640 6.83994 7.02420 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.204 4.204 2 C -0.187 4.187 3 C 0.020 3.980 4 H 0.092 0.908 5 C -0.109 4.109 6 C -0.112 4.112 7 C -0.100 4.100 8 H 0.080 0.920 9 C 0.124 3.876 10 N -0.728 5.728 11 C 0.489 3.511 12 O -0.511 6.511 13 C 0.091 3.909 14 N -0.466 5.466 15 C 0.065 3.935 16 C -0.151 4.151 17 C -0.033 4.033 18 O -0.545 6.545 19 Si 0.682 3.318 20 C -0.085 4.085 21 C -0.063 4.063 22 C -0.145 4.145 23 C -0.096 4.096 24 C -0.127 4.127 25 C 0.109 3.891 26 C -0.115 4.115 27 C -0.110 4.110 28 H 0.217 0.783 29 H 0.068 0.932 30 H 0.070 0.930 31 H 0.072 0.928 32 H 0.070 0.930 33 H 0.071 0.929 34 H 0.070 0.930 35 H 0.401 0.599 36 H 0.121 0.879 37 H 0.119 0.881 38 H 0.162 0.838 39 H 0.070 0.930 40 H 0.377 0.623 41 H -0.256 1.256 42 H -0.254 1.254 43 H 0.123 0.877 44 H 0.124 0.876 45 H 0.126 0.874 46 H 0.115 0.885 47 H 0.069 0.931 48 H 0.065 0.935 49 H 0.067 0.933 50 H 0.068 0.932 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.361 -3.296 2.093 4.563 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.221 4.221 2 C -0.187 4.187 3 C 0.002 3.998 4 H 0.110 0.890 5 C -0.147 4.147 6 C -0.150 4.150 7 C -0.119 4.119 8 H 0.099 0.901 9 C 0.000 4.000 10 N -0.382 5.382 11 C 0.272 3.728 12 O -0.384 6.384 13 C -0.035 4.035 14 N -0.149 5.149 15 C -0.060 4.060 16 C -0.159 4.159 17 C -0.144 4.144 18 O -0.351 6.351 19 Si 0.583 3.417 20 C -0.089 4.089 21 C -0.082 4.082 22 C -0.164 4.164 23 C -0.115 4.115 24 C -0.148 4.148 25 C 0.005 3.995 26 C -0.153 4.153 27 C -0.148 4.148 28 H 0.234 0.766 29 H 0.087 0.913 30 H 0.089 0.911 31 H 0.091 0.909 32 H 0.089 0.911 33 H 0.089 0.911 34 H 0.089 0.911 35 H 0.236 0.764 36 H 0.138 0.862 37 H 0.137 0.863 38 H 0.179 0.821 39 H 0.088 0.912 40 H 0.224 0.776 41 H -0.181 1.181 42 H -0.179 1.179 43 H 0.141 0.859 44 H 0.142 0.858 45 H 0.144 0.856 46 H 0.133 0.867 47 H 0.088 0.912 48 H 0.084 0.916 49 H 0.086 0.914 50 H 0.087 0.913 Dipole moment (debyes) X Y Z Total from point charges -3.270 -3.053 1.562 4.739 hybrid contribution -0.938 0.278 0.456 1.079 sum -4.208 -2.775 2.019 5.430 Atomic orbital electron populations 1.24989 0.96022 1.00380 1.00716 1.23049 0.94292 1.00726 1.00613 1.18347 0.84362 0.96753 1.00317 0.89011 1.21538 0.95082 0.95210 1.02832 1.21514 0.95139 0.99717 0.98635 1.21454 0.93376 0.96515 1.00540 0.90143 1.21462 0.93333 0.96121 0.89053 1.45967 1.06582 1.54410 1.31232 1.20976 0.82765 0.82040 0.86996 1.90833 1.55041 1.46540 1.46034 1.21592 0.79665 1.03100 0.99144 1.43161 1.03829 1.19033 1.48867 1.21396 0.90110 0.94375 1.00128 1.19531 0.92119 0.97169 1.07048 1.23941 0.95201 1.04569 0.90683 1.86578 1.48822 1.53685 1.45981 0.95292 0.87130 0.77809 0.81433 1.18926 0.92092 0.95602 1.02322 1.20281 0.98048 0.93538 0.96304 1.20671 0.96545 0.97492 1.01727 1.20827 0.92218 0.99036 0.99430 1.19952 0.99470 0.93213 1.02139 1.18171 0.89708 0.91892 0.99736 1.21630 0.95149 0.95892 1.02591 1.21547 0.95171 0.99542 0.98496 0.76621 0.91339 0.91118 0.90945 0.91116 0.91099 0.91121 0.76413 0.86154 0.86309 0.82103 0.91236 0.77577 1.18064 1.17896 0.85878 0.85798 0.85631 0.86680 0.91217 0.91610 0.91377 0.91292 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.20 -0.17 19.25 29.55 0.57 0.40 16 2 C -0.19 -0.23 12.56 -37.12 -0.47 -0.70 16 3 C 0.02 -0.02 2.56 -93.41 -0.24 -0.26 16 4 H 0.09 -0.11 8.14 -51.93 -0.42 -0.53 16 5 C -0.11 0.17 5.16 -26.73 -0.14 0.03 16 6 C -0.11 0.27 5.20 -26.73 -0.14 0.13 16 7 C -0.10 0.30 2.22 -90.62 -0.20 0.10 16 8 H 0.08 -0.26 8.14 -51.93 -0.42 -0.69 16 9 C 0.12 -0.14 5.07 -4.04 -0.02 -0.16 16 10 N -0.73 1.33 5.28 -60.29 -0.32 1.01 16 11 C 0.49 0.70 7.90 -10.98 -0.09 0.62 16 12 O -0.51 -3.56 16.42 5.56 0.09 -3.46 16 13 C 0.09 -0.08 6.48 -5.19 -0.03 -0.11 16 14 N -0.47 -1.57 2.27 -115.71 -0.26 -1.83 16 15 C 0.06 0.26 9.89 -16.73 -0.17 0.09 16 16 C -0.15 -0.73 5.61 -102.71 -0.58 -1.31 16 17 C -0.03 -0.06 3.05 36.01 0.11 0.05 16 18 O -0.55 -1.40 12.86 -35.23 -0.45 -1.86 16 19 Si 0.68 -0.16 30.79 -169.99 -5.23 -5.39 16 20 C -0.09 -0.49 6.35 -105.14 -0.67 -1.16 16 21 C -0.06 -0.28 10.05 -39.65 -0.40 -0.67 16 22 C -0.15 -0.45 9.97 -39.95 -0.40 -0.85 16 23 C -0.10 -0.27 10.01 -39.54 -0.40 -0.67 16 24 C -0.13 -0.45 10.00 -39.43 -0.39 -0.85 16 25 C 0.11 0.55 6.80 -83.99 -0.57 -0.02 16 26 C -0.12 0.36 5.08 -26.73 -0.14 0.22 16 27 C -0.11 0.22 5.16 -26.73 -0.14 0.08 16 28 H 0.22 -0.44 7.80 -54.09 -0.42 -0.86 16 29 H 0.07 -0.09 8.14 -51.93 -0.42 -0.51 16 30 H 0.07 -0.08 8.14 -51.92 -0.42 -0.51 16 31 H 0.07 -0.17 8.14 -51.93 -0.42 -0.60 16 32 H 0.07 -0.16 8.14 -51.93 -0.42 -0.58 16 33 H 0.07 0.02 8.14 -51.92 -0.42 -0.41 16 34 H 0.07 0.02 8.14 -51.93 -0.42 -0.41 16 35 H 0.40 -1.96 7.65 -40.82 -0.31 -2.27 16 36 H 0.12 -0.48 8.12 -51.93 -0.42 -0.90 16 37 H 0.12 -0.40 8.14 -51.93 -0.42 -0.82 16 38 H 0.16 0.33 6.30 -52.49 -0.33 -0.01 16 39 H 0.07 0.03 7.96 -51.93 -0.41 -0.39 16 40 H 0.38 -1.11 8.74 45.56 0.40 -0.71 16 41 H -0.26 -0.48 7.11 56.52 0.40 -0.07 16 42 H -0.25 -0.68 7.04 56.52 0.40 -0.28 16 43 H 0.12 0.35 8.06 -52.49 -0.42 -0.08 16 44 H 0.12 0.11 8.06 -52.49 -0.42 -0.31 16 45 H 0.13 0.06 8.06 -52.49 -0.42 -0.37 16 46 H 0.12 0.17 8.06 -52.49 -0.42 -0.25 16 47 H 0.07 -0.17 8.14 -51.93 -0.42 -0.60 16 48 H 0.07 -0.26 7.18 -51.93 -0.37 -0.64 16 49 H 0.07 -0.12 8.14 -51.93 -0.42 -0.55 16 50 H 0.07 -0.11 8.14 -51.93 -0.42 -0.53 16 LS Contribution 413.84 15.07 6.24 6.24 Total: 0.00 -11.92 413.84 -12.27 -24.19 By element: Atomic # 1 Polarization: -6.01 SS G_CDS: -7.84 Total: -13.85 kcal Atomic # 6 Polarization: -0.56 SS G_CDS: -4.49 Total: -5.04 kcal Atomic # 7 Polarization: -0.24 SS G_CDS: -0.58 Total: -0.82 kcal Atomic # 8 Polarization: -4.96 SS G_CDS: -0.36 Total: -5.32 kcal Atomic # 14 Polarization: -0.16 SS G_CDS: -5.23 Total: -5.39 kcal Total LS contribution 6.24 Total: 6.24 kcal Total: -11.92 -12.27 -24.19 kcal The number of atoms in the molecule is 50 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17850112_9818708.mol2 50 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 66.630 kcal (2) G-P(sol) polarization free energy of solvation -11.924 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 54.705 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -12.268 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -24.192 kcal (6) G-S(sol) free energy of system = (1) + (5) 42.437 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.20 seconds