Wall clock time and date at job start Sun Mar 7 2021 09:46:41 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53004 * 1 3 3 O 1.42902 * 109.46968 * 2 1 4 4 C 1.35907 * 116.99901 * 84.83943 * 3 2 1 5 5 C 1.38726 * 120.05474 * 174.34765 * 4 3 2 6 6 C 1.38143 * 119.94311 * 179.70099 * 5 4 3 7 7 C 1.38269 * 120.05550 * 0.60055 * 6 5 4 8 8 C 1.50696 * 119.94358 * 179.70225 * 7 6 5 9 9 O 1.42908 * 109.47043 * 119.97749 * 8 7 6 10 10 Si 1.86295 * 109.47346 * 359.97438 * 8 7 6 11 11 C 1.38263 * 120.10968 * 359.67590 * 7 6 5 12 12 C 1.38148 * 120.05697 * 0.02562 * 11 7 6 13 13 C 1.50701 * 109.47242 * 240.00026 * 2 1 3 14 14 O 1.21282 * 119.99847 * 119.99454 * 13 2 1 15 15 N 1.34770 * 119.99962 * 300.00163 * 13 2 1 16 16 C 1.46501 * 120.00078 * 179.97438 * 15 13 2 17 17 H 1.08998 * 112.85203 * 23.80301 * 16 15 13 18 18 C 1.53783 * 113.61682 * 154.99689 * 16 15 13 19 19 C 1.53779 * 87.08122 * 139.97972 * 18 16 15 20 20 H 1.09004 * 113.61261 * 89.11598 * 19 18 16 21 21 C 1.50696 * 113.61687 * 219.93373 * 19 18 16 22 22 N 1.30172 * 126.80722 * 265.03134 * 21 19 18 23 23 O 1.20917 * 111.61228 * 179.97438 * 22 21 19 24 24 C 1.34039 * 111.56389 * 359.97438 * 23 22 21 25 25 C 1.35451 * 106.44904 * 359.75480 * 24 23 22 26 26 C 1.53775 * 87.08183 * 334.56820 * 19 18 16 27 27 H 1.08991 * 109.47209 * 60.00223 * 1 2 3 28 28 H 1.09007 * 109.46736 * 180.02562 * 1 2 3 29 29 H 1.08994 * 109.47006 * 299.99658 * 1 2 3 30 30 H 1.08999 * 109.46946 * 119.99991 * 2 1 3 31 31 H 1.08001 * 120.02898 * 359.97438 * 5 4 3 32 32 H 1.08001 * 119.97610 * 180.32088 * 6 5 4 33 33 H 1.08998 * 109.47332 * 239.97515 * 8 7 6 34 34 H 0.96702 * 113.99658 * 299.99481 * 9 8 7 35 35 H 1.48498 * 110.00137 * 180.02562 * 10 8 7 36 36 H 1.48500 * 110.00038 * 301.31823 * 10 8 7 37 37 H 1.07995 * 119.97257 * 180.02562 * 11 7 6 38 38 H 1.07996 * 120.02883 * 180.02562 * 12 11 7 39 39 H 0.97002 * 120.00286 * 359.97438 * 15 13 2 40 40 H 1.08998 * 113.61711 * 254.52916 * 18 16 15 41 41 H 1.09003 * 113.61574 * 25.34938 * 18 16 15 42 42 H 1.08000 * 126.78290 * 180.02562 * 24 23 22 43 43 H 1.08000 * 128.01251 * 180.23077 * 25 24 23 44 44 H 1.09002 * 113.61680 * 270.87791 * 26 19 18 45 45 H 1.09010 * 113.61515 * 139.98101 * 26 19 18 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 8 2.0063 1.3473 0.0000 4 6 2.1093 1.9653 1.2060 5 6 2.6738 3.2295 1.2930 6 6 2.7717 3.8581 2.5192 7 6 2.3189 3.2232 3.6610 8 6 2.4330 3.9086 4.9982 9 8 1.1307 4.0677 5.5646 10 14 3.2212 5.5815 4.7734 11 6 1.7611 1.9609 3.5777 12 6 1.6553 1.3305 2.3530 13 6 2.0324 -0.7104 -1.2305 14 8 2.7296 -0.1209 -2.0288 15 7 1.7068 -2.0007 -1.4438 16 6 2.1947 -2.6911 -2.6402 17 1 3.0998 -2.2418 -3.0487 18 6 2.2845 -4.2176 -2.4770 19 6 1.7497 -4.3239 -3.9149 20 1 2.5326 -4.3210 -4.6733 21 6 0.7526 -5.4374 -4.1074 22 7 1.0014 -6.6420 -4.5335 23 8 -0.0031 -7.3133 -4.5828 24 6 -1.0788 -6.6203 -4.1837 25 6 -0.6373 -5.3828 -3.8543 26 6 1.1026 -2.9468 -3.6923 27 1 -0.3633 0.5138 -0.8899 28 1 -0.3633 -1.0278 0.0005 29 1 -0.3633 0.5138 0.8900 30 1 1.8933 -0.5138 0.8900 31 1 3.0325 3.7237 0.4021 32 1 3.2064 4.8445 2.5868 33 1 3.0478 3.3040 5.6651 34 1 0.5284 4.5966 5.0235 35 1 3.3400 6.2674 6.0852 36 1 4.5633 5.4318 4.1558 37 1 1.4077 1.4672 4.4709 38 1 1.2191 0.3447 2.2885 39 1 1.1494 -2.4722 -0.8051 40 1 3.3041 -4.5853 -2.3621 41 1 1.6033 -4.6173 -1.7257 42 1 -2.0960 -6.9792 -4.1304 43 1 -1.2139 -4.5471 -3.4862 44 1 0.0973 -2.9991 -3.2744 45 1 1.1682 -2.2883 -4.5586 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_18339242_10157680.mol2 45 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 09:46:41 Heat of formation + Delta-G solvation = 22.050398 kcal Electronic energy + Delta-G solvation = -28892.779385 eV Core-core repulsion = 24654.074415 eV Total energy + Delta-G solvation = -4238.704970 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 345.145 amu Computer time = 0.98 seconds Orbital eigenvalues (eV) -45.93474 -41.87496 -41.04946 -39.82773 -38.83449 -37.16774 -35.48736 -34.31402 -33.00579 -32.61346 -32.08468 -31.38178 -27.34935 -27.01920 -26.65018 -25.41501 -24.27541 -23.96474 -22.71986 -22.08947 -21.52308 -20.84305 -19.54924 -18.90267 -18.56477 -18.46845 -18.19351 -17.50074 -16.88665 -16.83249 -16.46425 -16.39415 -15.95461 -15.93200 -15.68309 -15.44152 -15.17345 -14.74419 -14.51919 -14.40268 -14.25985 -14.01106 -13.86763 -13.65016 -13.56399 -13.53146 -13.41075 -12.96204 -12.90264 -12.45597 -12.26690 -12.11760 -12.05964 -12.01339 -11.84668 -11.67637 -11.00711 -10.84332 -10.62830 -10.44067 -10.23864 -10.07231 -9.21317 -5.04129 0.22100 0.32239 0.50605 1.17336 1.29789 1.37650 1.45780 1.62781 1.97232 2.27120 2.39856 2.63974 3.00355 3.15993 3.32704 3.38813 3.45736 3.49359 3.54894 3.66890 3.69227 3.74295 3.81377 3.83261 3.85142 4.12538 4.16727 4.22832 4.28911 4.36297 4.41570 4.45139 4.48394 4.54184 4.55064 4.58423 4.59378 4.74004 4.80367 4.83648 4.93959 4.96321 5.04618 5.16005 5.27138 5.32391 5.45644 5.63382 6.18441 6.33526 6.56369 7.01819 7.27377 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.177 4.177 2 C 0.066 3.934 3 O -0.283 6.283 4 C 0.135 3.865 5 C -0.141 4.141 6 C -0.076 4.076 7 C -0.158 4.158 8 C -0.063 4.063 9 O -0.542 6.542 10 Si 0.686 3.314 11 C -0.051 4.051 12 C -0.212 4.212 13 C 0.520 3.480 14 O -0.510 6.510 15 N -0.716 5.716 16 C 0.126 3.874 17 H 0.123 0.877 18 C -0.132 4.132 19 C -0.034 4.034 20 H 0.114 0.886 21 C 0.028 3.972 22 N -0.361 5.361 23 O 0.100 5.900 24 C -0.055 4.055 25 C -0.234 4.234 26 C -0.140 4.140 27 H 0.077 0.923 28 H 0.078 0.922 29 H 0.079 0.921 30 H 0.101 0.899 31 H 0.138 0.862 32 H 0.134 0.866 33 H 0.112 0.888 34 H 0.379 0.621 35 H -0.255 1.255 36 H -0.258 1.258 37 H 0.129 0.871 38 H 0.131 0.869 39 H 0.402 0.598 40 H 0.084 0.916 41 H 0.091 0.909 42 H 0.218 0.782 43 H 0.171 0.829 44 H 0.092 0.908 45 H 0.083 0.917 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -6.026 -0.986 1.322 6.248 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.235 4.235 2 C 0.006 3.994 3 O -0.196 6.196 4 C 0.089 3.911 5 C -0.160 4.160 6 C -0.093 4.093 7 C -0.158 4.158 8 C -0.174 4.174 9 O -0.347 6.347 10 Si 0.588 3.412 11 C -0.069 4.069 12 C -0.230 4.230 13 C 0.305 3.695 14 O -0.383 6.383 15 N -0.369 5.369 16 C 0.022 3.978 17 H 0.140 0.860 18 C -0.171 4.171 19 C -0.054 4.054 20 H 0.132 0.868 21 C -0.131 4.131 22 N -0.064 5.064 23 O 0.033 5.967 24 C -0.136 4.136 25 C -0.255 4.255 26 C -0.179 4.179 27 H 0.096 0.904 28 H 0.097 0.903 29 H 0.098 0.902 30 H 0.119 0.881 31 H 0.155 0.845 32 H 0.151 0.849 33 H 0.130 0.870 34 H 0.226 0.774 35 H -0.180 1.180 36 H -0.183 1.183 37 H 0.147 0.853 38 H 0.149 0.851 39 H 0.237 0.763 40 H 0.103 0.897 41 H 0.109 0.891 42 H 0.234 0.766 43 H 0.188 0.812 44 H 0.110 0.890 45 H 0.101 0.899 Dipole moment (debyes) X Y Z Total from point charges -3.390 -0.945 0.823 3.614 hybrid contribution -1.067 -0.581 0.799 1.454 sum -4.457 -1.526 1.622 4.983 Atomic orbital electron populations 1.22363 0.92286 1.03859 1.04979 1.22201 0.95930 0.83320 0.97993 1.86224 1.80921 1.25369 1.27053 1.19076 0.95163 0.92838 0.83986 1.20415 1.03132 0.93668 0.98783 1.20842 0.98021 0.99040 0.91419 1.20246 1.03707 0.96497 0.95372 1.24961 0.90247 1.08893 0.93279 1.86495 1.22614 1.76296 1.49305 0.94748 0.82990 0.79831 0.83587 1.20787 0.95497 0.93584 0.97030 1.21321 1.07262 1.01783 0.92669 1.20127 0.80412 0.82090 0.86899 1.90780 1.36127 1.65464 1.45941 1.45819 1.54029 1.11441 1.25604 1.22501 0.98594 0.91456 0.85279 0.85961 1.23404 1.02920 0.94801 0.95992 1.20674 0.95887 0.90310 0.98485 0.86839 1.23374 0.94519 0.93761 1.01448 1.73879 1.07900 1.05739 1.18910 1.84877 1.11767 1.37209 1.62820 1.26102 0.94973 0.92265 1.00265 1.22696 0.94318 0.99656 1.08849 1.23556 0.99364 0.95001 0.99955 0.90367 0.90278 0.90215 0.88146 0.84456 0.84913 0.87038 0.77374 1.18000 1.18256 0.85270 0.85119 0.76262 0.89702 0.89093 0.76592 0.81178 0.88962 0.89855 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.18 0.56 9.07 37.16 0.34 0.90 16 2 C 0.07 -0.05 2.65 -27.88 -0.07 -0.13 16 3 O -0.28 -0.69 9.33 -39.36 -0.37 -1.06 16 4 C 0.13 0.19 6.60 -39.22 -0.26 -0.06 16 5 C -0.14 -0.15 9.99 -39.44 -0.39 -0.55 16 6 C -0.08 0.01 8.66 -39.60 -0.34 -0.34 16 7 C -0.16 -0.01 5.39 -104.60 -0.56 -0.57 16 8 C -0.06 0.02 2.82 36.00 0.10 0.12 16 9 O -0.54 0.01 12.77 -35.23 -0.45 -0.44 16 10 Si 0.69 -0.68 29.78 -169.99 -5.06 -5.74 16 11 C -0.05 0.00 9.60 -39.61 -0.38 -0.38 16 12 C -0.21 0.04 8.24 -39.43 -0.32 -0.29 16 13 C 0.52 0.49 7.23 -10.99 -0.08 0.41 16 14 O -0.51 -2.96 16.10 -14.35 -0.23 -3.19 16 15 N -0.72 1.69 5.25 -53.02 -0.28 1.41 16 16 C 0.13 -0.22 4.24 -67.12 -0.28 -0.51 16 17 H 0.12 0.00 7.46 -51.93 -0.39 -0.39 16 18 C -0.13 0.32 7.38 -25.92 -0.19 0.13 16 19 C -0.03 0.04 4.29 -90.97 -0.39 -0.35 16 20 H 0.11 -0.11 8.14 -51.93 -0.42 -0.53 16 21 C 0.03 0.01 6.70 -82.10 -0.55 -0.54 16 22 N -0.36 -1.02 12.07 33.42 0.40 -0.61 16 23 O 0.10 0.14 11.20 17.18 0.19 0.33 16 24 C -0.05 0.11 12.30 29.74 0.37 0.48 16 25 C -0.23 0.41 10.28 -39.38 -0.40 0.00 16 26 C -0.14 0.32 7.27 -25.92 -0.19 0.13 16 27 H 0.08 -0.15 8.14 -51.93 -0.42 -0.57 16 28 H 0.08 -0.45 7.57 -51.92 -0.39 -0.84 16 29 H 0.08 -0.26 6.90 -51.93 -0.36 -0.62 16 30 H 0.10 -0.29 6.32 -51.93 -0.33 -0.61 16 31 H 0.14 0.05 8.06 -52.49 -0.42 -0.37 16 32 H 0.13 -0.26 4.87 -52.49 -0.26 -0.51 16 33 H 0.11 0.01 7.96 -51.93 -0.41 -0.40 16 34 H 0.38 -1.44 8.70 45.56 0.40 -1.04 16 35 H -0.25 -0.58 7.11 56.52 0.40 -0.18 16 36 H -0.26 -0.36 7.11 56.52 0.40 0.04 16 37 H 0.13 -0.10 8.06 -52.49 -0.42 -0.52 16 38 H 0.13 -0.32 5.43 -52.49 -0.28 -0.60 16 39 H 0.40 -2.15 8.15 -40.82 -0.33 -2.49 16 40 H 0.08 -0.18 8.14 -51.93 -0.42 -0.61 16 41 H 0.09 -0.29 8.07 -51.93 -0.42 -0.71 16 42 H 0.22 -1.34 8.06 -52.49 -0.42 -1.76 16 43 H 0.17 -0.72 7.13 -52.49 -0.37 -1.09 16 44 H 0.09 -0.32 6.63 -51.93 -0.34 -0.66 16 45 H 0.08 -0.13 8.14 -51.92 -0.42 -0.55 16 LS Contribution 375.35 15.07 5.66 5.66 Total: 0.00 -10.80 375.35 -9.41 -20.21 By element: Atomic # 1 Polarization: -9.38 SS G_CDS: -5.65 Total: -15.03 kcal Atomic # 6 Polarization: 2.09 SS G_CDS: -3.62 Total: -1.54 kcal Atomic # 7 Polarization: 0.68 SS G_CDS: 0.13 Total: 0.80 kcal Atomic # 8 Polarization: -3.50 SS G_CDS: -0.86 Total: -4.36 kcal Atomic # 14 Polarization: -0.68 SS G_CDS: -5.06 Total: -5.74 kcal Total LS contribution 5.66 Total: 5.66 kcal Total: -10.80 -9.41 -20.21 kcal The number of atoms in the molecule is 45 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_18339242_10157680.mol2 45 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 42.265 kcal (2) G-P(sol) polarization free energy of solvation -10.802 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 31.463 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.412 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.214 kcal (6) G-S(sol) free energy of system = (1) + (5) 22.050 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.98 seconds