Wall clock time and date at job start Sun Mar 7 2021 09:47:06 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42905 * 1 3 3 Si 1.86298 * 109.46909 * 2 1 4 4 C 1.50694 * 109.47044 * 119.99763 * 2 1 3 5 5 C 1.38420 * 119.89435 * 244.97747 * 4 2 1 6 6 C 1.38245 * 120.34083 * 180.02562 * 5 4 2 7 7 C 1.38277 * 120.11870 * 359.72399 * 6 5 4 8 8 F 1.35099 * 120.11317 * 180.27658 * 7 6 5 9 9 C 1.39870 * 119.77759 * 0.57315 * 7 6 5 10 10 C 1.47696 * 120.16494 * 179.70033 * 9 7 6 11 11 O 1.21572 * 120.00121 * 359.72603 * 10 9 7 12 12 N 1.34782 * 119.99810 * 179.72275 * 10 9 7 13 13 C 1.46492 * 119.99890 * 180.02562 * 12 10 9 14 14 H 1.09001 * 112.91031 * 336.24827 * 13 12 10 15 15 C 1.53775 * 113.61876 * 107.50392 * 13 12 10 16 16 C 1.53780 * 87.08433 * 139.97798 * 15 13 12 17 17 H 1.09004 * 113.68680 * 89.13095 * 16 15 13 18 18 C 1.50693 * 113.61683 * 220.02138 * 16 15 13 19 19 N 1.30173 * 126.80325 * 192.52349 * 18 16 15 20 20 O 1.20923 * 111.60616 * 179.97438 * 19 18 16 21 21 C 1.34042 * 111.56962 * 0.02562 * 20 19 18 22 22 C 1.35449 * 106.44291 * 359.97438 * 21 20 19 23 23 C 1.53779 * 87.08039 * 334.57137 * 16 15 13 24 24 C 1.37907 * 119.89264 * 65.00383 * 4 2 1 25 25 H 0.96704 * 114.00177 * 299.99637 * 1 2 3 26 26 H 1.08997 * 109.46687 * 240.00038 * 2 1 3 27 27 H 1.48497 * 110.00030 * 178.68161 * 3 2 1 28 28 H 1.48501 * 110.00156 * 299.99808 * 3 2 1 29 29 H 1.07998 * 119.82377 * 0.02562 * 5 4 2 30 30 H 1.08001 * 119.94089 * 179.97438 * 6 5 4 31 31 H 0.96996 * 119.99375 * 0.02562 * 12 10 9 32 32 H 1.09004 * 113.60786 * 25.43199 * 15 13 12 33 33 H 1.08995 * 113.61916 * 254.53161 * 15 13 12 34 34 H 1.07997 * 126.77638 * 179.97438 * 21 20 19 35 35 H 1.08004 * 128.00729 * 180.02562 * 22 21 20 36 36 H 1.09003 * 113.61637 * 139.97784 * 23 16 15 37 37 H 1.08999 * 113.61379 * 270.79883 * 23 16 15 38 38 H 1.08004 * 120.05368 * 359.97269 * 24 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9313 -0.7103 1.2304 5 6 2.6399 -0.0092 2.1909 6 6 3.1054 -0.6517 3.3230 7 6 2.8605 -2.0003 3.5056 8 9 3.3107 -2.6269 4.6146 9 6 2.1505 -2.7150 2.5353 10 6 1.8898 -4.1572 2.7184 11 8 2.2970 -4.7271 3.7121 12 7 1.2005 -4.8414 1.7840 13 6 0.9415 -6.2717 1.9659 14 1 1.6609 -6.7523 2.6289 15 6 -0.5226 -6.5940 2.3083 16 6 -0.3918 -7.8082 1.3737 17 1 -0.0371 -8.7095 1.8737 18 6 -1.6134 -8.0517 0.5256 19 7 -1.8758 -9.1159 -0.1766 20 8 -2.9345 -9.0193 -0.7529 21 6 -3.5276 -7.8441 -0.5002 22 6 -2.7018 -7.1695 0.3350 23 6 0.7176 -7.0299 0.6468 24 6 1.6841 -2.0570 1.3957 25 1 -0.3934 0.4417 0.7651 26 1 1.7923 -0.5138 -0.8900 27 1 3.5345 1.7703 0.0321 28 1 1.5615 2.4679 -1.2085 29 1 2.8299 1.0452 2.0551 30 1 3.6579 -0.0985 4.0680 31 1 0.8760 -4.3867 0.9910 32 1 -1.2293 -5.8439 1.9532 33 1 -0.6779 -6.8621 3.3533 34 1 -4.4766 -7.5025 -0.8864 35 1 -2.8422 -6.1857 0.7578 36 1 1.5638 -7.6499 0.3506 37 1 0.3502 -6.4001 -0.1634 38 1 1.1310 -2.6015 0.6447 There are 57 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 57 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_18339242_12335834.mol2 38 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 09:47:06 Heat of formation + Delta-G solvation = 14.011231 kcal Electronic energy + Delta-G solvation = -25855.119884 eV Core-core repulsion = 21776.369764 eV Total energy + Delta-G solvation = -4078.750120 eV No. of doubly occupied orbitals = 57 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 319.105 amu Computer time = 0.78 seconds Orbital eigenvalues (eV) -49.88944 -45.89378 -41.55435 -40.52536 -39.30523 -37.62104 -35.42014 -34.13821 -32.70529 -32.52463 -32.30234 -27.26871 -26.96483 -26.77137 -25.37436 -24.11276 -23.33475 -22.14859 -21.59473 -20.85268 -19.23758 -18.87736 -18.46269 -18.39170 -18.31524 -17.49688 -17.13064 -16.86034 -16.41573 -16.32174 -16.05678 -15.86856 -15.73431 -15.54998 -14.96162 -14.59990 -14.43150 -14.37929 -13.92196 -13.81942 -13.74264 -13.55478 -13.27208 -12.92080 -12.84617 -12.40534 -12.32041 -12.04072 -11.98858 -11.79490 -11.08311 -10.93906 -10.63752 -10.58704 -10.46905 -10.15504 -9.89413 -5.21033 -0.56375 -0.15469 0.54494 1.08298 1.21849 1.46614 1.60581 1.82262 1.92463 2.31777 2.42414 2.96738 3.05249 3.17701 3.21212 3.32230 3.38884 3.44123 3.47894 3.59441 3.78438 3.82626 3.89892 3.95222 4.17056 4.22573 4.33921 4.38528 4.49952 4.52614 4.58199 4.61228 4.63168 4.73209 4.79489 4.80656 4.85224 4.97852 4.98978 5.10451 5.38757 5.49010 6.31888 6.35027 7.07514 7.31189 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.538 6.538 2 C -0.066 4.066 3 Si 0.686 3.314 4 C -0.141 4.141 5 C -0.058 4.058 6 C -0.157 4.157 7 C 0.168 3.832 8 F -0.110 7.110 9 C -0.175 4.175 10 C 0.560 3.440 11 O -0.518 6.518 12 N -0.714 5.714 13 C 0.126 3.874 14 H 0.123 0.877 15 C -0.140 4.140 16 C -0.034 4.034 17 H 0.114 0.886 18 C 0.028 3.972 19 N -0.362 5.362 20 O 0.100 5.900 21 C -0.055 4.055 22 C -0.233 4.233 23 C -0.132 4.132 24 C -0.031 4.031 25 H 0.381 0.619 26 H 0.118 0.882 27 H -0.255 1.255 28 H -0.251 1.251 29 H 0.142 0.858 30 H 0.150 0.850 31 H 0.401 0.599 32 H 0.092 0.908 33 H 0.083 0.917 34 H 0.218 0.782 35 H 0.171 0.829 36 H 0.084 0.916 37 H 0.090 0.910 38 H 0.138 0.862 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -3.213 6.238 -1.644 7.207 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.344 6.344 2 C -0.177 4.177 3 Si 0.587 3.413 4 C -0.141 4.141 5 C -0.076 4.076 6 C -0.175 4.175 7 C 0.147 3.853 8 F -0.088 7.088 9 C -0.179 4.179 10 C 0.347 3.653 11 O -0.394 6.394 12 N -0.366 5.366 13 C 0.021 3.979 14 H 0.141 0.859 15 C -0.179 4.179 16 C -0.053 4.053 17 H 0.132 0.868 18 C -0.131 4.131 19 N -0.065 5.065 20 O 0.033 5.967 21 C -0.136 4.136 22 C -0.255 4.255 23 C -0.172 4.172 24 C -0.050 4.050 25 H 0.229 0.771 26 H 0.135 0.865 27 H -0.179 1.179 28 H -0.176 1.176 29 H 0.159 0.841 30 H 0.168 0.832 31 H 0.237 0.763 32 H 0.110 0.890 33 H 0.101 0.899 34 H 0.234 0.766 35 H 0.188 0.812 36 H 0.103 0.897 37 H 0.109 0.891 38 H 0.156 0.844 Dipole moment (debyes) X Y Z Total from point charges -1.678 4.898 -2.076 5.578 hybrid contribution -0.389 0.360 -0.135 0.547 sum -2.068 5.257 -2.211 6.067 Atomic orbital electron populations 1.86522 1.16788 1.81667 1.49404 1.25043 0.85456 1.10277 0.96945 0.94800 0.81205 0.77534 0.87762 1.20332 1.01281 0.94610 0.97926 1.21081 0.94627 0.99719 0.92185 1.21181 1.03536 0.92658 1.00150 1.17754 0.93963 0.90445 0.83149 1.91635 1.85877 1.82318 1.48992 1.20077 1.05884 0.94595 0.97382 1.18015 0.78094 0.85957 0.83226 1.90876 1.50404 1.69804 1.28348 1.45823 1.56885 1.09998 1.23896 1.22496 0.97121 0.80138 0.98132 0.85904 1.23557 0.97245 0.96551 1.00536 1.20679 0.90377 0.98963 0.95324 0.86832 1.23377 0.98621 0.90902 1.00160 1.73878 0.99582 1.22752 1.10294 1.84874 1.24529 1.33964 1.53327 1.26099 1.01189 0.86320 1.00034 1.22706 0.95152 1.03346 1.04267 1.23403 0.98416 0.98447 0.96887 1.21020 0.95209 0.93790 0.94946 0.77141 0.86507 1.17934 1.17602 0.84075 0.83181 0.76293 0.88974 0.89851 0.76585 0.81156 0.89704 0.89143 0.84421 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 1.41 12.83 -35.23 -0.45 0.96 16 2 C -0.07 0.20 2.80 36.00 0.10 0.30 16 3 Si 0.69 -2.26 29.79 -169.99 -5.06 -7.32 16 4 C -0.14 0.35 5.35 -104.68 -0.56 -0.21 16 5 C -0.06 0.17 8.66 -39.51 -0.34 -0.17 16 6 C -0.16 0.22 10.01 -39.56 -0.40 -0.17 16 7 C 0.17 0.25 7.29 -38.96 -0.28 -0.03 16 8 F -0.11 -0.48 15.55 2.25 0.04 -0.45 16 9 C -0.18 -0.13 5.88 -104.91 -0.62 -0.75 16 10 C 0.56 1.33 7.77 -12.39 -0.10 1.23 16 11 O -0.52 -3.35 14.94 5.30 0.08 -3.28 16 12 N -0.71 0.59 5.31 -54.01 -0.29 0.31 16 13 C 0.13 -0.10 4.24 -67.13 -0.28 -0.38 16 14 H 0.12 0.10 7.47 -51.93 -0.39 -0.29 16 15 C -0.14 0.19 7.27 -25.92 -0.19 0.01 16 16 C -0.03 0.02 4.29 -90.96 -0.39 -0.37 16 17 H 0.11 -0.04 8.14 -51.93 -0.42 -0.47 16 18 C 0.03 0.03 6.70 -82.10 -0.55 -0.52 16 19 N -0.36 -1.22 12.07 33.42 0.40 -0.81 16 20 O 0.10 0.19 11.20 17.17 0.19 0.38 16 21 C -0.05 0.08 12.30 29.74 0.37 0.45 16 22 C -0.23 0.24 10.28 -39.38 -0.40 -0.16 16 23 C -0.13 0.21 7.38 -25.92 -0.19 0.02 16 24 C -0.03 0.06 9.17 -39.19 -0.36 -0.30 16 25 H 0.38 -2.39 8.70 45.56 0.40 -1.99 16 26 H 0.12 -0.33 7.96 -51.93 -0.41 -0.74 16 27 H -0.25 0.22 7.11 56.52 0.40 0.62 16 28 H -0.25 -0.08 7.11 56.52 0.40 0.32 16 29 H 0.14 -0.75 4.88 -52.49 -0.26 -1.00 16 30 H 0.15 -0.50 8.06 -52.49 -0.42 -0.92 16 31 H 0.40 -1.35 6.76 -40.82 -0.28 -1.63 16 32 H 0.09 -0.22 6.62 -51.93 -0.34 -0.56 16 33 H 0.08 -0.07 8.14 -51.93 -0.42 -0.49 16 34 H 0.22 -1.22 8.06 -52.49 -0.42 -1.65 16 35 H 0.17 -0.58 7.12 -52.48 -0.37 -0.95 16 36 H 0.08 -0.12 8.14 -51.93 -0.42 -0.54 16 37 H 0.09 -0.20 8.07 -51.93 -0.42 -0.62 16 38 H 0.14 -0.51 6.41 -52.48 -0.34 -0.85 16 LS Contribution 329.80 15.07 4.97 4.97 Total: 0.00 -10.03 329.80 -8.04 -18.08 By element: Atomic # 1 Polarization: -8.03 SS G_CDS: -3.72 Total: -11.75 kcal Atomic # 6 Polarization: 3.13 SS G_CDS: -4.20 Total: -1.07 kcal Atomic # 7 Polarization: -0.63 SS G_CDS: 0.12 Total: -0.51 kcal Atomic # 8 Polarization: -1.76 SS G_CDS: -0.18 Total: -1.94 kcal Atomic # 9 Polarization: -0.48 SS G_CDS: 0.04 Total: -0.45 kcal Atomic # 14 Polarization: -2.26 SS G_CDS: -5.06 Total: -7.32 kcal Total LS contribution 4.97 Total: 4.97 kcal Total: -10.03 -8.04 -18.08 kcal The number of atoms in the molecule is 38 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_18339242_12335834.mol2 38 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 32.087 kcal (2) G-P(sol) polarization free energy of solvation -10.035 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 22.052 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.041 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.075 kcal (6) G-S(sol) free energy of system = (1) + (5) 14.011 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.78 seconds