Wall clock time and date at job start Sun Mar 7 2021 09:47:05 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42905 * 1 3 3 Si 1.86298 * 109.46909 * 2 1 4 4 C 1.50694 * 109.47044 * 119.99763 * 2 1 3 5 5 C 1.38420 * 119.89435 * 244.97747 * 4 2 1 6 6 C 1.38245 * 120.34083 * 180.02562 * 5 4 2 7 7 C 1.38277 * 120.11870 * 359.72399 * 6 5 4 8 8 F 1.35099 * 120.11317 * 180.27658 * 7 6 5 9 9 C 1.39870 * 119.77759 * 0.57315 * 7 6 5 10 10 C 1.47696 * 120.16494 * 179.70033 * 9 7 6 11 11 O 1.21572 * 120.00121 * 359.72603 * 10 9 7 12 12 N 1.34782 * 119.99810 * 179.72275 * 10 9 7 13 13 C 1.46492 * 119.99890 * 180.02562 * 12 10 9 14 14 H 1.09001 * 112.91031 * 336.24827 * 13 12 10 15 15 C 1.53775 * 113.61876 * 107.50392 * 13 12 10 16 16 C 1.53780 * 87.08433 * 139.97798 * 15 13 12 17 17 H 1.09004 * 113.68680 * 89.13095 * 16 15 13 18 18 C 1.50693 * 113.61683 * 220.02138 * 16 15 13 19 19 N 1.30173 * 126.80325 * 192.52349 * 18 16 15 20 20 O 1.20923 * 111.60616 * 179.97438 * 19 18 16 21 21 C 1.34042 * 111.56962 * 0.02562 * 20 19 18 22 22 C 1.35449 * 106.44291 * 359.97438 * 21 20 19 23 23 C 1.53779 * 87.08039 * 334.57137 * 16 15 13 24 24 C 1.37907 * 119.89264 * 65.00383 * 4 2 1 25 25 H 0.96704 * 114.00177 * 299.99637 * 1 2 3 26 26 H 1.08997 * 109.46687 * 240.00038 * 2 1 3 27 27 H 1.48497 * 110.00030 * 178.68161 * 3 2 1 28 28 H 1.48501 * 110.00156 * 299.99808 * 3 2 1 29 29 H 1.07998 * 119.82377 * 0.02562 * 5 4 2 30 30 H 1.08001 * 119.94089 * 179.97438 * 6 5 4 31 31 H 0.96996 * 119.99375 * 0.02562 * 12 10 9 32 32 H 1.09004 * 113.60786 * 25.43199 * 15 13 12 33 33 H 1.08995 * 113.61916 * 254.53161 * 15 13 12 34 34 H 1.07997 * 126.77638 * 179.97438 * 21 20 19 35 35 H 1.08004 * 128.00729 * 180.02562 * 22 21 20 36 36 H 1.09003 * 113.61637 * 139.97784 * 23 16 15 37 37 H 1.08999 * 113.61379 * 270.79883 * 23 16 15 38 38 H 1.08004 * 120.05368 * 359.97269 * 24 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9313 -0.7103 1.2304 5 6 2.6399 -0.0092 2.1909 6 6 3.1054 -0.6517 3.3230 7 6 2.8605 -2.0003 3.5056 8 9 3.3107 -2.6269 4.6146 9 6 2.1505 -2.7150 2.5353 10 6 1.8898 -4.1572 2.7184 11 8 2.2970 -4.7271 3.7121 12 7 1.2005 -4.8414 1.7840 13 6 0.9415 -6.2717 1.9659 14 1 1.6609 -6.7523 2.6289 15 6 -0.5226 -6.5940 2.3083 16 6 -0.3918 -7.8082 1.3737 17 1 -0.0371 -8.7095 1.8737 18 6 -1.6134 -8.0517 0.5256 19 7 -1.8758 -9.1159 -0.1766 20 8 -2.9345 -9.0193 -0.7529 21 6 -3.5276 -7.8441 -0.5002 22 6 -2.7018 -7.1695 0.3350 23 6 0.7176 -7.0299 0.6468 24 6 1.6841 -2.0570 1.3957 25 1 -0.3934 0.4417 0.7651 26 1 1.7923 -0.5138 -0.8900 27 1 3.5345 1.7703 0.0321 28 1 1.5615 2.4679 -1.2085 29 1 2.8299 1.0452 2.0551 30 1 3.6579 -0.0985 4.0680 31 1 0.8760 -4.3867 0.9910 32 1 -1.2293 -5.8439 1.9532 33 1 -0.6779 -6.8621 3.3533 34 1 -4.4766 -7.5025 -0.8864 35 1 -2.8422 -6.1857 0.7578 36 1 1.5638 -7.6499 0.3506 37 1 0.3502 -6.4001 -0.1634 38 1 1.1310 -2.6015 0.6447 There are 57 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 57 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_18339242_12335834.mol2 38 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 09:47:05 Heat of formation + Delta-G solvation = 12.866714 kcal Electronic energy + Delta-G solvation = -25855.169514 eV Core-core repulsion = 21776.369764 eV Total energy + Delta-G solvation = -4078.799750 eV No. of doubly occupied orbitals = 57 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 319.105 amu Computer time = 0.83 seconds Orbital eigenvalues (eV) -50.01559 -45.89961 -41.57941 -40.42572 -39.36078 -37.41867 -35.47857 -34.14463 -32.64034 -32.44828 -32.18964 -27.26564 -26.88596 -26.60430 -25.31901 -24.06513 -23.24801 -22.08028 -21.64156 -20.79782 -19.17986 -18.83336 -18.49948 -18.30604 -18.26725 -17.42973 -17.11919 -16.93639 -16.32877 -16.28694 -15.99183 -15.83054 -15.66415 -15.52520 -14.83083 -14.53551 -14.36406 -14.35373 -13.87816 -13.73340 -13.64921 -13.44179 -13.19527 -12.85115 -12.83608 -12.41536 -12.16535 -11.97047 -11.87106 -11.78178 -11.20116 -10.89012 -10.56749 -10.45143 -10.41994 -10.13777 -9.82757 -4.96027 -0.50408 -0.03233 0.61883 1.27373 1.32351 1.58132 1.68307 1.91578 2.03494 2.46504 2.47671 3.04630 3.10679 3.26714 3.36966 3.46215 3.50986 3.57600 3.65241 3.68322 3.84955 3.98010 4.01413 4.10624 4.29231 4.42393 4.45629 4.53313 4.60577 4.62360 4.71642 4.73442 4.76693 4.83814 4.86031 4.92718 4.94916 5.09148 5.14135 5.16404 5.41897 5.59721 6.33604 6.80700 7.02035 7.35277 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.551 6.551 2 C -0.065 4.065 3 Si 0.768 3.232 4 C -0.135 4.135 5 C -0.049 4.049 6 C -0.152 4.152 7 C 0.133 3.867 8 F -0.137 7.137 9 C -0.189 4.189 10 C 0.555 3.445 11 O -0.571 6.571 12 N -0.697 5.697 13 C 0.122 3.878 14 H 0.102 0.898 15 C -0.129 4.129 16 C -0.037 4.037 17 H 0.104 0.896 18 C 0.020 3.980 19 N -0.406 5.406 20 O 0.079 5.921 21 C -0.046 4.046 22 C -0.239 4.239 23 C -0.120 4.120 24 C -0.024 4.024 25 H 0.397 0.603 26 H 0.118 0.882 27 H -0.283 1.283 28 H -0.302 1.302 29 H 0.169 0.831 30 H 0.167 0.833 31 H 0.416 0.584 32 H 0.109 0.891 33 H 0.075 0.925 34 H 0.257 0.743 35 H 0.196 0.804 36 H 0.082 0.918 37 H 0.104 0.896 38 H 0.158 0.842 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -4.453 8.168 -2.756 9.702 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.359 6.359 2 C -0.175 4.175 3 Si 0.674 3.326 4 C -0.135 4.135 5 C -0.067 4.067 6 C -0.171 4.171 7 C 0.113 3.887 8 F -0.115 7.115 9 C -0.193 4.193 10 C 0.343 3.657 11 O -0.451 6.451 12 N -0.349 5.349 13 C 0.017 3.983 14 H 0.120 0.880 15 C -0.168 4.168 16 C -0.057 4.057 17 H 0.122 0.878 18 C -0.138 4.138 19 N -0.112 5.112 20 O 0.015 5.985 21 C -0.127 4.127 22 C -0.261 4.261 23 C -0.159 4.159 24 C -0.043 4.043 25 H 0.248 0.752 26 H 0.136 0.864 27 H -0.210 1.210 28 H -0.230 1.230 29 H 0.186 0.814 30 H 0.185 0.815 31 H 0.255 0.745 32 H 0.127 0.873 33 H 0.094 0.906 34 H 0.273 0.727 35 H 0.213 0.787 36 H 0.100 0.900 37 H 0.122 0.878 38 H 0.176 0.824 Dipole moment (debyes) X Y Z Total from point charges -2.965 6.822 -3.208 8.101 hybrid contribution -0.055 -0.157 0.115 0.202 sum -3.020 6.666 -3.093 7.945 Atomic orbital electron populations 1.86497 1.16656 1.82051 1.50666 1.25079 0.85618 1.10257 0.96565 0.93872 0.78049 0.75212 0.85418 1.20478 1.00677 0.94319 0.98060 1.21380 0.93296 1.00872 0.91135 1.21398 1.03212 0.91482 1.01006 1.18225 0.95640 0.91783 0.83081 1.91561 1.86523 1.83017 1.50434 1.20050 1.07009 0.93749 0.98455 1.18372 0.77660 0.86753 0.82866 1.90845 1.52753 1.70938 1.30544 1.45701 1.55656 1.09832 1.23665 1.22423 0.97211 0.80125 0.98494 0.87986 1.23511 0.96849 0.96430 0.99986 1.20676 0.90461 0.98971 0.95579 0.87796 1.23721 0.99415 0.91004 0.99708 1.73876 1.00842 1.24405 1.12094 1.84817 1.24475 1.35521 1.53642 1.26907 1.01968 0.84846 0.98986 1.23049 0.94351 1.04159 1.04498 1.23341 0.97910 0.98062 0.96589 1.21196 0.94671 0.94203 0.94217 0.75220 0.86416 1.21008 1.23044 0.81423 0.81514 0.74546 0.87254 0.90629 0.72732 0.78728 0.89961 0.87772 0.82414 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.55 4.17 12.83 -148.98 -1.91 2.26 16 2 C -0.06 0.52 2.80 71.23 0.20 0.72 16 3 Si 0.77 -6.19 29.79 68.60 2.04 -4.14 16 4 C -0.13 0.92 5.35 -19.90 -0.11 0.82 16 5 C -0.05 0.38 8.66 22.31 0.19 0.57 16 6 C -0.15 0.51 10.01 22.28 0.22 0.73 16 7 C 0.13 0.55 7.29 22.67 0.17 0.71 16 8 F -0.14 -1.56 15.55 44.97 0.70 -0.86 16 9 C -0.19 -0.39 5.88 -20.05 -0.12 -0.51 16 10 C 0.56 3.41 7.77 86.74 0.67 4.09 16 11 O -0.57 -9.02 14.94 -3.94 -0.06 -9.08 16 12 N -0.70 0.97 5.31 -443.06 -2.35 -1.38 16 13 C 0.12 -0.07 4.24 45.52 0.19 0.12 16 14 H 0.10 0.42 7.47 -2.39 -0.02 0.40 16 15 C -0.13 0.32 7.27 31.12 0.23 0.55 16 16 C -0.04 0.01 4.29 -11.02 -0.05 -0.04 16 17 H 0.10 0.13 8.14 -2.38 -0.02 0.11 16 18 C 0.02 0.05 6.70 43.58 0.29 0.34 16 19 N -0.41 -3.13 12.07 -49.56 -0.60 -3.72 16 20 O 0.08 0.32 11.20 71.61 0.80 1.13 16 21 C -0.05 0.20 12.30 67.17 0.83 1.02 16 22 C -0.24 0.80 10.28 22.40 0.23 1.03 16 23 C -0.12 0.34 7.38 31.12 0.23 0.57 16 24 C -0.02 0.12 9.17 22.52 0.21 0.32 16 25 H 0.40 -6.01 8.70 -74.05 -0.64 -6.66 16 26 H 0.12 -0.91 7.96 -2.39 -0.02 -0.93 16 27 H -0.28 0.87 7.11 99.48 0.71 1.58 16 28 H -0.30 -0.22 7.11 99.48 0.71 0.49 16 29 H 0.17 -2.23 4.88 -2.91 -0.01 -2.25 16 30 H 0.17 -1.23 8.06 -2.91 -0.02 -1.25 16 31 H 0.42 -3.25 6.76 -92.71 -0.63 -3.87 16 32 H 0.11 -0.66 6.62 -2.39 -0.02 -0.67 16 33 H 0.07 -0.04 8.14 -2.39 -0.02 -0.06 16 34 H 0.26 -3.56 8.06 -2.91 -0.02 -3.59 16 35 H 0.20 -1.80 7.12 -2.91 -0.02 -1.82 16 36 H 0.08 -0.17 8.14 -2.39 -0.02 -0.19 16 37 H 0.10 -0.57 8.07 -2.39 -0.02 -0.58 16 38 H 0.16 -1.51 6.41 -2.91 -0.02 -1.53 16 Total: 0.00 -27.49 329.80 1.92 -25.57 By element: Atomic # 1 Polarization: -20.73 SS G_CDS: -0.09 Total: -20.82 kcal Atomic # 6 Polarization: 7.66 SS G_CDS: 3.39 Total: 11.05 kcal Atomic # 7 Polarization: -2.15 SS G_CDS: -2.95 Total: -5.10 kcal Atomic # 8 Polarization: -4.52 SS G_CDS: -1.17 Total: -5.69 kcal Atomic # 9 Polarization: -1.56 SS G_CDS: 0.70 Total: -0.86 kcal Atomic # 14 Polarization: -6.19 SS G_CDS: 2.04 Total: -4.14 kcal Total: -27.49 1.92 -25.57 kcal The number of atoms in the molecule is 38 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_18339242_12335834.mol2 38 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 38.435 kcal (2) G-P(sol) polarization free energy of solvation -27.493 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 10.942 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.924 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -25.568 kcal (6) G-S(sol) free energy of system = (1) + (5) 12.867 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.83 seconds