Wall clock time and date at job start Sun Mar 7 2021 09:47:13 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42896 * 1 3 3 Si 1.86301 * 109.46847 * 2 1 4 4 C 1.50693 * 109.47730 * 239.99913 * 2 1 3 5 5 C 1.34456 * 126.48439 * 105.01683 * 4 2 1 6 6 N 1.36564 * 109.98634 * 179.97438 * 5 4 2 7 7 C 1.37828 * 109.86191 * 0.02562 * 6 5 4 8 8 C 1.38639 * 133.38106 * 179.97438 * 7 6 5 9 9 C 1.39319 * 119.66715 * 179.97438 * 8 7 6 10 10 C 1.47578 * 119.83447 * 179.97438 * 9 8 7 11 11 O 1.21596 * 119.99625 * 0.02562 * 10 9 8 12 12 N 1.34774 * 120.00479 * 179.97438 * 10 9 8 13 13 C 1.46496 * 120.00099 * 180.02562 * 12 10 9 14 14 H 1.08994 * 112.91109 * 23.75176 * 13 12 10 15 15 C 1.53787 * 113.61210 * 155.00440 * 13 12 10 16 16 C 1.53779 * 87.07963 * 139.97940 * 15 13 12 17 17 H 1.09001 * 113.61377 * 89.20020 * 16 15 13 18 18 C 1.50701 * 113.61123 * 220.01652 * 16 15 13 19 19 N 1.30177 * 126.80081 * 265.02257 * 18 16 15 20 20 O 1.20924 * 111.60476 * 179.97438 * 19 18 16 21 21 C 1.34039 * 111.56662 * 0.02562 * 20 19 18 22 22 C 1.35451 * 106.44693 * 359.74243 * 21 20 19 23 23 C 1.53779 * 87.08402 * 334.56577 * 16 15 13 24 24 C 1.40201 * 120.33659 * 0.25777 * 9 8 7 25 25 C 1.36232 * 120.37550 * 359.45567 * 24 9 8 26 26 C 1.39883 * 119.95845 * 0.56305 * 25 24 9 27 27 H 0.96698 * 113.99867 * 60.00578 * 1 2 3 28 28 H 1.09001 * 109.47357 * 119.99294 * 2 1 3 29 29 H 1.48502 * 110.00054 * 59.99742 * 3 2 1 30 30 H 1.48500 * 110.00089 * 181.31647 * 3 2 1 31 31 H 1.08001 * 125.00359 * 359.95272 * 5 4 2 32 32 H 0.97001 * 125.07031 * 180.02562 * 6 5 4 33 33 H 1.08001 * 120.16462 * 359.97438 * 8 7 6 34 34 H 0.97002 * 119.99411 * 0.02562 * 12 10 9 35 35 H 1.08997 * 113.61028 * 254.52900 * 15 13 12 36 36 H 1.09000 * 113.61529 * 25.43039 * 15 13 12 37 37 H 1.07999 * 126.77890 * 180.02562 * 21 20 19 38 38 H 1.07996 * 128.01068 * 180.23949 * 22 21 20 39 39 H 1.09002 * 113.61557 * 270.88569 * 23 16 15 40 40 H 1.09004 * 113.61501 * 139.97990 * 23 16 15 41 41 H 1.07993 * 119.81424 * 179.72540 * 24 9 8 42 42 H 1.08004 * 120.02096 * 180.23570 * 25 24 9 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0499 1.7565 0.0000 4 6 1.9314 -0.7104 -1.2303 5 6 2.4621 -0.1363 -2.3243 6 7 2.8045 -1.0947 -3.2349 7 6 2.4952 -2.3432 -2.7394 8 6 2.6314 -3.6278 -3.2425 9 6 2.2134 -4.7154 -2.4787 10 6 2.3561 -6.0845 -3.0108 11 8 2.8379 -6.2611 -4.1132 12 7 1.9535 -7.1392 -2.2746 13 6 2.0957 -8.4982 -2.8027 14 1 2.8738 -8.5792 -3.5617 15 6 2.1856 -9.5772 -1.7106 16 6 1.2929 -10.4493 -2.6090 17 1 1.8516 -11.0648 -3.3141 18 6 0.2506 -11.2290 -1.8496 19 7 0.3478 -12.4575 -1.4300 20 8 -0.6527 -12.8102 -0.8496 21 6 -1.5691 -11.8328 -0.8087 22 6 -1.0243 -10.7695 -1.4468 23 6 0.7614 -9.1408 -3.2173 24 6 1.6525 -4.5156 -1.2094 25 6 1.5203 -3.2569 -0.7051 26 6 1.9348 -2.1548 -1.4602 27 1 -0.3933 0.4416 -0.7651 28 1 1.7923 -0.5137 0.8900 29 1 1.5613 2.4679 1.2085 30 1 3.5345 1.7704 -0.0321 31 1 2.5972 0.9263 -2.4626 32 1 3.2055 -0.9226 -4.1011 33 1 3.0593 -3.7847 -4.2217 34 1 1.5695 -6.9982 -1.3951 35 1 3.1904 -9.9769 -1.5735 36 1 1.7119 -9.2891 -0.7721 37 1 -2.5468 -11.8818 -0.3526 38 1 -1.4631 -9.7965 -1.6116 39 1 -0.1016 -8.7334 -2.6908 40 1 0.6164 -9.1882 -4.2966 41 1 1.3273 -5.3644 -0.6264 42 1 1.0909 -3.1098 0.2749 There are 61 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 61 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_18339242_12335838.mol2 42 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 09:47:13 Heat of formation + Delta-G solvation = 89.251392 kcal Electronic energy + Delta-G solvation = -27719.787242 eV Core-core repulsion = 23636.337945 eV Total energy + Delta-G solvation = -4083.449297 eV No. of doubly occupied orbitals = 61 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 340.126 amu Computer time = 0.97 seconds Orbital eigenvalues (eV) -45.87043 -42.50122 -41.22063 -39.62991 -37.87320 -37.44952 -35.33894 -33.89651 -33.26596 -32.58788 -30.73983 -30.61482 -27.13668 -26.91558 -26.48292 -24.73470 -23.91487 -23.64188 -22.23511 -21.42342 -20.92833 -20.69816 -19.40032 -18.84267 -18.44028 -18.29364 -17.71418 -17.30738 -16.98242 -16.42372 -16.27629 -16.01300 -15.86645 -15.59485 -15.43511 -15.14328 -14.86098 -14.74409 -14.45785 -14.36463 -14.02943 -13.87876 -13.71218 -13.50401 -13.13632 -12.82119 -12.64986 -12.34649 -12.32659 -12.25460 -11.97578 -11.93695 -11.74710 -10.96034 -10.86873 -10.76986 -10.56516 -10.37342 -10.08510 -9.37182 -8.83101 -5.11929 -0.27839 0.37866 0.56653 1.24371 1.26884 1.35247 1.60420 1.86155 1.95513 1.99118 2.20256 2.34506 2.91132 3.09520 3.25608 3.47972 3.52888 3.55377 3.62753 3.73311 3.75035 3.82339 3.84668 3.93514 4.08401 4.19512 4.29832 4.37342 4.40590 4.46189 4.53093 4.54795 4.57621 4.64059 4.67600 4.73166 4.84644 4.88987 4.96615 5.01097 5.15435 5.22585 5.41687 5.42161 5.52806 5.59194 5.96855 6.34464 6.47734 6.63116 7.22127 7.33451 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.542 6.542 2 C -0.030 4.030 3 Si 0.685 3.315 4 C -0.211 4.211 5 C 0.077 3.923 6 N -0.584 5.584 7 C 0.081 3.919 8 C -0.056 4.056 9 C -0.122 4.122 10 C 0.565 3.435 11 O -0.537 6.537 12 N -0.715 5.715 13 C 0.126 3.874 14 H 0.122 0.878 15 C -0.133 4.133 16 C -0.034 4.034 17 H 0.113 0.887 18 C 0.029 3.971 19 N -0.362 5.362 20 O 0.099 5.901 21 C -0.055 4.055 22 C -0.233 4.233 23 C -0.140 4.140 24 C -0.113 4.113 25 C -0.073 4.073 26 C -0.063 4.063 27 H 0.377 0.623 28 H 0.111 0.889 29 H -0.254 1.254 30 H -0.256 1.256 31 H 0.179 0.821 32 H 0.422 0.578 33 H 0.136 0.864 34 H 0.402 0.598 35 H 0.084 0.916 36 H 0.090 0.910 37 H 0.217 0.783 38 H 0.171 0.829 39 H 0.092 0.908 40 H 0.082 0.918 41 H 0.125 0.875 42 H 0.130 0.870 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.953 4.961 0.111 5.774 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.347 6.347 2 C -0.141 4.141 3 Si 0.586 3.414 4 C -0.219 4.219 5 C -0.051 4.051 6 N -0.186 5.186 7 C -0.025 4.025 8 C -0.077 4.077 9 C -0.127 4.127 10 C 0.353 3.647 11 O -0.415 6.415 12 N -0.367 5.367 13 C 0.021 3.979 14 H 0.140 0.860 15 C -0.172 4.172 16 C -0.054 4.054 17 H 0.131 0.869 18 C -0.130 4.130 19 N -0.065 5.065 20 O 0.033 5.967 21 C -0.137 4.137 22 C -0.255 4.255 23 C -0.179 4.179 24 C -0.133 4.133 25 C -0.091 4.091 26 C -0.068 4.068 27 H 0.224 0.776 28 H 0.129 0.871 29 H -0.179 1.179 30 H -0.181 1.181 31 H 0.196 0.804 32 H 0.260 0.740 33 H 0.154 0.846 34 H 0.238 0.762 35 H 0.102 0.898 36 H 0.108 0.892 37 H 0.234 0.766 38 H 0.188 0.812 39 H 0.110 0.890 40 H 0.101 0.899 41 H 0.143 0.857 42 H 0.148 0.852 Dipole moment (debyes) X Y Z Total from point charges -1.009 4.206 0.111 4.326 hybrid contribution -0.550 0.273 0.178 0.639 sum -1.558 4.479 0.289 4.751 Atomic orbital electron populations 1.86504 1.17419 1.81758 1.49015 1.24328 0.84759 1.08865 0.96165 0.95274 0.80756 0.77349 0.88010 1.20732 1.10834 0.92130 0.98196 1.21752 0.99709 0.94346 0.89328 1.41723 1.54618 1.04020 1.18247 1.18075 1.03231 0.86318 0.94882 1.20080 0.99415 0.88075 1.00122 1.19423 1.05054 0.92333 0.95864 1.18196 0.77197 0.84625 0.84648 1.90796 1.44400 1.86183 1.20104 1.45840 1.64211 1.05644 1.20970 1.22464 0.98583 0.79572 0.97290 0.86023 1.23403 1.00854 0.95043 0.97860 1.20690 0.93964 0.93660 0.97076 0.86888 1.23394 0.96504 0.91432 1.01714 1.73878 1.05947 1.15259 1.11444 1.84872 1.18636 1.37478 1.55739 1.26094 0.97611 0.87789 1.02186 1.22708 0.95420 1.02185 1.05153 1.23561 0.98271 0.93763 1.02327 1.20673 1.00609 0.97314 0.94722 1.20204 0.98773 0.90511 0.99650 1.19179 1.00986 0.93077 0.93594 0.77576 0.87149 1.17893 1.18090 0.80432 0.73983 0.84593 0.76186 0.89759 0.89150 0.76608 0.81150 0.89001 0.89945 0.85703 0.85231 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 0.11 12.88 -35.23 -0.45 -0.35 16 2 C -0.03 0.02 3.06 36.00 0.11 0.13 16 3 Si 0.68 -1.50 30.75 -169.99 -5.23 -6.73 16 4 C -0.21 0.06 5.57 -102.74 -0.57 -0.51 16 5 C 0.08 -0.18 10.43 -16.78 -0.17 -0.36 16 6 N -0.58 0.98 6.07 -10.69 -0.06 0.91 16 7 C 0.08 0.09 7.26 -84.00 -0.61 -0.52 16 8 C -0.06 -0.10 9.61 -39.03 -0.37 -0.47 16 9 C -0.12 -0.20 5.87 -104.95 -0.62 -0.82 16 10 C 0.57 1.43 7.76 -12.45 -0.10 1.33 16 11 O -0.54 -3.24 15.91 5.28 0.08 -3.16 16 12 N -0.72 0.32 5.30 -54.04 -0.29 0.03 16 13 C 0.13 -0.07 4.24 -67.12 -0.28 -0.35 16 14 H 0.12 0.11 7.46 -51.93 -0.39 -0.28 16 15 C -0.13 0.18 7.38 -25.92 -0.19 -0.01 16 16 C -0.03 0.01 4.29 -90.96 -0.39 -0.38 16 17 H 0.11 -0.03 8.14 -51.93 -0.42 -0.45 16 18 C 0.03 0.04 6.70 -82.10 -0.55 -0.51 16 19 N -0.36 -1.26 12.07 33.42 0.40 -0.86 16 20 O 0.10 0.20 11.20 17.18 0.19 0.39 16 21 C -0.06 0.07 12.30 29.74 0.37 0.44 16 22 C -0.23 0.20 10.28 -39.38 -0.40 -0.20 16 23 C -0.14 0.16 7.27 -25.92 -0.19 -0.02 16 24 C -0.11 0.00 9.46 -39.57 -0.37 -0.37 16 25 C -0.07 -0.06 10.03 -39.69 -0.40 -0.46 16 26 C -0.06 -0.09 6.35 -105.04 -0.67 -0.76 16 27 H 0.38 -1.54 8.70 45.56 0.40 -1.14 16 28 H 0.11 0.00 7.96 -51.93 -0.41 -0.42 16 29 H -0.25 -0.36 7.11 56.52 0.40 0.04 16 30 H -0.26 -0.09 7.11 56.52 0.40 0.31 16 31 H 0.18 -1.07 6.35 -52.49 -0.33 -1.41 16 32 H 0.42 -1.86 8.96 -40.82 -0.37 -2.22 16 33 H 0.14 0.22 7.62 -52.49 -0.40 -0.18 16 34 H 0.40 -1.14 6.72 -40.82 -0.27 -1.42 16 35 H 0.08 -0.10 8.14 -51.93 -0.42 -0.53 16 36 H 0.09 -0.18 8.07 -51.93 -0.42 -0.59 16 37 H 0.22 -1.19 8.06 -52.49 -0.42 -1.61 16 38 H 0.17 -0.54 7.12 -52.49 -0.37 -0.92 16 39 H 0.09 -0.19 6.62 -51.93 -0.34 -0.53 16 40 H 0.08 -0.05 8.14 -51.93 -0.42 -0.48 16 41 H 0.13 -0.35 6.36 -52.49 -0.33 -0.69 16 42 H 0.13 -0.03 8.06 -52.48 -0.42 -0.46 16 LS Contribution 358.74 15.07 5.41 5.41 Total: 0.00 -11.24 358.74 -9.92 -21.17 By element: Atomic # 1 Polarization: -8.41 SS G_CDS: -4.56 Total: -12.97 kcal Atomic # 6 Polarization: 1.57 SS G_CDS: -5.42 Total: -3.85 kcal Atomic # 7 Polarization: 0.03 SS G_CDS: 0.05 Total: 0.09 kcal Atomic # 8 Polarization: -2.93 SS G_CDS: -0.18 Total: -3.11 kcal Atomic # 14 Polarization: -1.50 SS G_CDS: -5.23 Total: -6.73 kcal Total LS contribution 5.41 Total: 5.41 kcal Total: -11.24 -9.92 -21.17 kcal The number of atoms in the molecule is 42 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_18339242_12335838.mol2 42 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 110.418 kcal (2) G-P(sol) polarization free energy of solvation -11.242 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 99.176 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.925 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.167 kcal (6) G-S(sol) free energy of system = (1) + (5) 89.251 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.97 seconds