Wall clock time and date at job start Sun Mar 7 2021 09:47:39 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42904 * 1 3 3 Si 1.86305 * 109.46923 * 2 1 4 4 C 1.50704 * 109.46536 * 119.99422 * 2 1 3 5 5 C 1.37940 * 119.92258 * 65.00876 * 4 2 1 6 6 C 1.39593 * 119.87320 * 180.25218 * 5 4 2 7 7 C 1.47844 * 120.14156 * 179.72316 * 6 5 4 8 8 O 1.21558 * 119.99753 * 359.97438 * 7 6 5 9 9 N 1.34778 * 120.00245 * 179.97438 * 7 6 5 10 10 C 1.46499 * 120.00064 * 179.97438 * 9 7 6 11 11 H 1.09009 * 112.84773 * 23.80323 * 10 9 7 12 12 C 1.53777 * 113.61582 * 154.99753 * 10 9 7 13 13 C 1.53780 * 87.08348 * 139.98267 * 12 10 9 14 14 H 1.09000 * 113.61504 * 89.11899 * 13 12 10 15 15 C 1.50702 * 113.61481 * 219.93507 * 13 12 10 16 16 N 1.30168 * 126.80442 * 265.02388 * 15 13 12 17 17 O 1.20921 * 111.60794 * 179.97438 * 16 15 13 18 18 C 1.34040 * 111.56412 * 0.02562 * 17 16 15 19 19 C 1.35447 * 106.44654 * 359.74813 * 18 17 16 20 20 C 1.53777 * 113.61866 * 252.49692 * 10 9 7 21 21 C 1.39550 * 119.72184 * 359.46794 * 6 5 4 22 22 C 1.38079 * 119.83835 * 0.54942 * 21 6 5 23 23 Br 1.89095 * 119.93698 * 179.70484 * 22 21 6 24 24 C 1.38362 * 119.92000 * 245.02022 * 4 2 1 25 25 H 0.96694 * 114.00331 * 300.00875 * 1 2 3 26 26 H 1.08997 * 109.47532 * 239.99517 * 2 1 3 27 27 H 1.48506 * 109.99582 * 299.99178 * 3 2 1 28 28 H 1.48489 * 110.00413 * 61.31387 * 3 2 1 29 29 H 1.08002 * 120.06044 * 359.96531 * 5 4 2 30 30 H 0.96996 * 119.99794 * 359.97438 * 9 7 6 31 31 H 1.09003 * 113.61941 * 254.53268 * 12 10 9 32 32 H 1.09000 * 113.61295 * 25.34746 * 12 10 9 33 33 H 1.08002 * 126.77837 * 180.02562 * 18 17 16 34 34 H 1.08002 * 128.01130 * 180.23485 * 19 18 17 35 35 H 1.09008 * 113.61062 * 334.56855 * 20 10 9 36 36 H 1.09001 * 113.61877 * 105.46867 * 20 10 9 37 37 H 1.07999 * 120.08011 * 180.28092 * 21 6 5 38 38 H 1.08001 * 119.86094 * 0.02562 * 24 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9312 -0.7103 1.2306 5 6 1.6843 -2.0573 1.3966 6 6 2.1454 -2.7130 2.5393 7 6 1.8788 -4.1552 2.7262 8 8 1.2565 -4.7723 1.8838 9 7 2.3258 -4.7857 3.8303 10 6 2.0611 -6.2146 4.0157 11 1 1.8832 -6.7375 3.0759 12 6 3.0808 -6.9167 4.9278 13 6 1.8947 -7.6924 5.5248 14 1 1.6702 -8.6200 4.9983 15 6 1.9822 -7.8736 7.0183 16 7 2.4626 -8.9042 7.6519 17 8 2.3985 -8.7594 8.8507 18 6 1.8508 -7.5801 9.1760 19 6 1.5636 -6.9557 8.0088 20 6 1.0082 -6.5110 5.0966 21 6 2.8637 -2.0028 3.5022 22 6 3.1039 -0.6548 3.3244 23 35 4.0697 0.3121 4.6314 24 6 2.6387 -0.0098 2.1914 25 1 -0.3933 0.4418 0.7649 26 1 1.7924 -0.5139 -0.8899 27 1 1.5615 2.4678 -1.2087 28 1 1.5878 2.4587 1.2240 29 1 1.1313 -2.6024 0.6459 30 1 2.8227 -4.2933 4.5023 31 1 3.7877 -7.5472 4.3885 32 1 3.5669 -6.2463 5.6366 33 1 1.6773 -7.2004 10.1721 34 1 1.1165 -5.9828 7.8674 35 1 0.9266 -5.7299 5.8525 36 1 0.0418 -6.8139 4.6934 37 1 3.2271 -2.5054 4.3864 38 1 2.8288 1.0448 2.0569 There are 57 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 57 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_18339242_12335870.mol2 38 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 09:47:39 Heat of formation + Delta-G solvation = 60.496199 kcal Electronic energy + Delta-G solvation = -25127.018022 eV Core-core repulsion = 21179.919614 eV Total energy + Delta-G solvation = -3947.098408 eV No. of doubly occupied orbitals = 57 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 379.025 amu Computer time = 0.75 seconds Orbital eigenvalues (eV) -45.91700 -41.74981 -40.66486 -39.34164 -37.84735 -35.48736 -34.21506 -33.70277 -32.87675 -32.57399 -30.55325 -27.46806 -27.05209 -26.98382 -25.19183 -24.01414 -22.91061 -22.34096 -21.55492 -20.86287 -19.19119 -18.91406 -18.47436 -18.00896 -17.78550 -17.42683 -16.87860 -16.47921 -16.37357 -16.08376 -15.83328 -15.66723 -15.15793 -14.99800 -14.53843 -14.33910 -14.23822 -13.95140 -13.75370 -13.57059 -13.34632 -13.07956 -12.88790 -12.44183 -12.33554 -12.05902 -12.02348 -11.86267 -11.82256 -11.53366 -11.14884 -10.96970 -10.75348 -10.61225 -10.42607 -10.18766 -9.99184 -5.09863 -0.57578 -0.24718 0.33533 0.52287 1.09712 1.19475 1.44755 1.51097 1.82362 1.91011 2.29533 2.42126 3.01794 3.12963 3.17919 3.23969 3.33149 3.41590 3.54510 3.69155 3.75054 3.77808 3.86932 3.89202 4.13148 4.14231 4.18765 4.31149 4.44085 4.47155 4.50208 4.56813 4.60316 4.66335 4.76240 4.81795 4.85795 4.95315 4.99643 5.07253 5.28898 5.37350 6.25130 6.27243 7.00950 7.28982 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.524 6.524 2 C -0.074 4.074 3 Si 0.682 3.318 4 C -0.117 4.117 5 C -0.016 4.016 6 C -0.128 4.128 7 C 0.563 3.437 8 O -0.525 6.525 9 N -0.715 5.715 10 C 0.125 3.875 11 H 0.124 0.876 12 C -0.132 4.132 13 C -0.034 4.034 14 H 0.114 0.886 15 C 0.028 3.972 16 N -0.362 5.362 17 O 0.100 5.900 18 C -0.055 4.055 19 C -0.234 4.234 20 C -0.140 4.140 21 C -0.053 4.053 22 C -0.095 4.095 23 Br -0.033 7.033 24 C -0.065 4.065 25 H 0.377 0.623 26 H 0.126 0.874 27 H -0.250 1.250 28 H -0.255 1.255 29 H 0.149 0.851 30 H 0.401 0.599 31 H 0.085 0.915 32 H 0.090 0.910 33 H 0.218 0.782 34 H 0.171 0.829 35 H 0.091 0.909 36 H 0.083 0.917 37 H 0.138 0.862 38 H 0.143 0.857 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.269 3.514 3.325 5.343 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.330 6.330 2 C -0.184 4.184 3 Si 0.582 3.418 4 C -0.118 4.118 5 C -0.036 4.036 6 C -0.132 4.132 7 C 0.350 3.650 8 O -0.401 6.401 9 N -0.366 5.366 10 C 0.021 3.979 11 H 0.142 0.858 12 C -0.171 4.171 13 C -0.053 4.053 14 H 0.132 0.868 15 C -0.131 4.131 16 N -0.064 5.064 17 O 0.033 5.967 18 C -0.136 4.136 19 C -0.255 4.255 20 C -0.179 4.179 21 C -0.074 4.074 22 C -0.174 4.174 23 Br 0.053 6.947 24 C -0.085 4.085 25 H 0.225 0.775 26 H 0.143 0.857 27 H -0.175 1.175 28 H -0.180 1.180 29 H 0.166 0.834 30 H 0.237 0.763 31 H 0.104 0.896 32 H 0.109 0.891 33 H 0.234 0.766 34 H 0.188 0.812 35 H 0.110 0.890 36 H 0.102 0.898 37 H 0.156 0.844 38 H 0.160 0.840 Dipole moment (debyes) X Y Z Total from point charges 2.604 2.773 2.271 4.431 hybrid contribution -1.397 0.716 0.932 1.826 sum 1.207 3.489 3.203 4.888 Atomic orbital electron populations 1.86652 1.17154 1.79885 1.49332 1.25059 0.84343 1.11111 0.97869 0.95022 0.91571 0.74258 0.80925 1.20314 0.99825 0.94494 0.97202 1.21314 0.93558 0.93117 0.95578 1.19961 1.02700 0.93820 0.96761 1.18140 0.78904 0.86352 0.81613 1.90830 1.39619 1.67005 1.42666 1.45865 1.57620 1.10432 1.22679 1.22517 0.95896 0.80511 0.99020 0.85837 1.23403 0.96640 0.98841 0.98260 1.20676 0.98213 0.99401 0.87038 0.86816 1.23371 1.00610 0.91071 0.98024 1.73876 1.19790 1.23004 0.89776 1.84876 1.59721 1.33727 1.18344 1.26098 0.99079 0.86575 1.01851 1.22699 1.08353 1.03263 0.91223 1.23559 0.98875 0.97049 0.98448 1.21282 0.95432 0.92341 0.98322 1.21645 1.04084 0.95046 0.96640 1.96849 1.72441 1.73594 1.51808 1.21278 0.95128 1.00291 0.91764 0.77493 0.85658 1.17499 1.18023 0.83373 0.76300 0.89634 0.89117 0.76598 0.81189 0.89008 0.89845 0.84424 0.84013 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.52 -0.15 12.83 -35.23 -0.45 -0.60 16 2 C -0.07 0.10 2.80 36.01 0.10 0.20 16 3 Si 0.68 -1.37 29.88 -169.99 -5.08 -6.45 16 4 C -0.12 0.12 5.34 -104.68 -0.56 -0.43 16 5 C -0.02 0.00 9.23 -39.19 -0.36 -0.37 16 6 C -0.13 0.02 5.87 -104.97 -0.62 -0.59 16 7 C 0.56 0.61 7.77 -12.33 -0.10 0.52 16 8 O -0.52 -2.55 15.95 5.31 0.08 -2.47 16 9 N -0.71 1.24 5.31 -53.96 -0.29 0.95 16 10 C 0.13 -0.19 4.24 -67.12 -0.28 -0.48 16 11 H 0.12 -0.02 7.46 -51.92 -0.39 -0.40 16 12 C -0.13 0.29 7.38 -25.92 -0.19 0.10 16 13 C -0.03 0.04 4.29 -90.96 -0.39 -0.35 16 14 H 0.11 -0.10 8.14 -51.93 -0.42 -0.52 16 15 C 0.03 0.02 6.70 -82.10 -0.55 -0.53 16 16 N -0.36 -1.09 12.07 33.42 0.40 -0.68 16 17 O 0.10 0.16 11.20 17.18 0.19 0.35 16 18 C -0.05 0.10 12.30 29.74 0.37 0.46 16 19 C -0.23 0.33 10.28 -39.38 -0.40 -0.08 16 20 C -0.14 0.28 7.27 -25.92 -0.19 0.09 16 21 C -0.05 0.10 9.28 -39.15 -0.36 -0.27 16 22 C -0.09 0.12 6.22 -39.57 -0.25 -0.13 16 23 Br -0.03 0.04 33.69 -68.01 -2.29 -2.25 16 24 C -0.07 0.10 8.40 -39.47 -0.33 -0.23 16 25 H 0.38 -0.99 8.70 45.56 0.40 -0.60 16 26 H 0.13 -0.26 7.96 -51.93 -0.41 -0.68 16 27 H -0.25 -0.34 7.11 56.52 0.40 0.06 16 28 H -0.26 0.09 7.00 56.52 0.40 0.48 16 29 H 0.15 0.17 7.65 -52.49 -0.40 -0.23 16 30 H 0.40 -1.68 6.76 -40.82 -0.28 -1.95 16 31 H 0.08 -0.18 8.14 -51.93 -0.42 -0.60 16 32 H 0.09 -0.26 8.07 -51.93 -0.42 -0.68 16 33 H 0.22 -1.28 8.06 -52.49 -0.42 -1.70 16 34 H 0.17 -0.64 7.13 -52.49 -0.37 -1.01 16 35 H 0.09 -0.27 6.63 -51.92 -0.34 -0.61 16 36 H 0.08 -0.11 8.14 -51.93 -0.42 -0.54 16 37 H 0.14 -0.57 6.40 -52.49 -0.34 -0.91 16 38 H 0.14 -0.38 4.82 -52.49 -0.25 -0.63 16 LS Contribution 346.48 15.07 5.22 5.22 Total: 0.00 -8.50 346.48 -10.03 -18.53 By element: Atomic # 1 Polarization: -6.81 SS G_CDS: -3.70 Total: -10.51 kcal Atomic # 6 Polarization: 2.03 SS G_CDS: -4.12 Total: -2.09 kcal Atomic # 7 Polarization: 0.15 SS G_CDS: 0.12 Total: 0.27 kcal Atomic # 8 Polarization: -2.54 SS G_CDS: -0.18 Total: -2.72 kcal Atomic # 14 Polarization: -1.37 SS G_CDS: -5.08 Total: -6.45 kcal Atomic # 35 Polarization: 0.04 SS G_CDS: -2.29 Total: -2.25 kcal Total LS contribution 5.22 Total: 5.22 kcal Total: -8.50 -10.03 -18.53 kcal The number of atoms in the molecule is 38 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_18339242_12335870.mol2 38 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 79.028 kcal (2) G-P(sol) polarization free energy of solvation -8.505 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 70.523 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.027 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.532 kcal (6) G-S(sol) free energy of system = (1) + (5) 60.496 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.75 seconds