Wall clock time and date at job start Sun Mar 7 2021 09:47:51 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42903 * 1 3 3 Si 1.86299 * 109.46927 * 2 1 4 4 C 1.50698 * 109.47436 * 119.99939 * 2 1 3 5 5 C 1.38182 * 119.84439 * 255.02280 * 4 2 1 6 6 C 1.38314 * 120.14409 * 179.76242 * 5 4 2 7 7 F 1.35101 * 120.08339 * 180.25341 * 6 5 4 8 8 C 1.39805 * 119.83286 * 0.47124 * 6 5 4 9 9 C 1.47690 * 120.15536 * 179.79114 * 8 6 5 10 10 O 1.21576 * 120.00314 * 359.71536 * 9 8 6 11 11 N 1.34778 * 120.00070 * 179.71828 * 9 8 6 12 12 C 1.46508 * 120.00070 * 179.97438 * 11 9 8 13 13 H 1.08996 * 112.84794 * 23.80324 * 12 11 9 14 14 C 1.53777 * 113.61317 * 154.99976 * 12 11 9 15 15 C 1.53773 * 87.08030 * 140.06390 * 14 12 11 16 16 H 1.09004 * 113.61300 * 89.20395 * 15 14 12 17 17 C 1.50708 * 113.61631 * 220.01783 * 15 14 12 18 18 N 1.30171 * 126.80178 * 263.49360 * 17 15 14 19 19 O 1.20923 * 111.60389 * 179.97438 * 18 17 15 20 20 C 1.34034 * 111.56833 * 0.02562 * 19 18 17 21 21 C 1.35451 * 106.44611 * 359.97438 * 20 19 18 22 22 C 1.53782 * 87.17712 * 334.60979 * 15 14 12 23 23 C 1.39657 * 119.68718 * 359.50717 * 8 6 5 24 24 C 1.38062 * 119.85472 * 0.25713 * 23 8 6 25 25 F 1.35098 * 119.91911 * 180.02562 * 24 23 8 26 26 H 0.96696 * 114.00117 * 60.00135 * 1 2 3 27 27 H 1.09003 * 109.46932 * 240.00186 * 2 1 3 28 28 H 1.48494 * 110.00161 * 60.00391 * 3 2 1 29 29 H 1.48501 * 109.99823 * 181.32239 * 3 2 1 30 30 H 1.07999 * 119.93180 * 359.97438 * 5 4 2 31 31 H 0.96997 * 120.00359 * 359.97438 * 11 9 8 32 32 H 1.09003 * 113.61514 * 25.51890 * 14 12 11 33 33 H 1.08994 * 113.69453 * 254.62641 * 14 12 11 34 34 H 1.08002 * 126.78139 * 180.02562 * 20 19 18 35 35 H 1.08005 * 128.00874 * 180.02562 * 21 20 19 36 36 H 1.08998 * 113.61546 * 139.93390 * 22 15 14 37 37 H 1.09005 * 113.61220 * 270.84409 * 22 15 14 38 38 H 1.08005 * 120.07198 * 180.23483 * 23 8 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9314 -0.7104 1.2304 5 6 2.4527 0.0198 2.2814 6 6 2.9111 -0.6255 3.4156 7 9 3.4158 0.0900 4.4445 8 6 2.8550 -2.0202 3.4929 9 6 3.3467 -2.7169 4.6988 10 8 3.8064 -2.0777 5.6252 11 7 3.2859 -4.0613 4.7723 12 6 3.7742 -4.7524 5.9683 13 1 3.7708 -4.1181 6.8546 14 6 3.1250 -6.1282 6.1928 15 6 4.5154 -6.6270 6.6203 16 1 4.7141 -6.5065 7.6852 17 6 4.8420 -8.0094 6.1167 18 7 4.7058 -9.1286 6.7673 19 8 5.0510 -10.0762 6.1001 20 6 5.4736 -9.6964 4.8862 21 6 5.3569 -8.3475 4.8442 22 6 5.1022 -5.5008 5.7529 23 6 2.3263 -2.7513 2.4268 24 6 1.8679 -2.0937 1.3028 25 9 1.3558 -2.7995 0.2710 26 1 -0.3933 0.4417 -0.7650 27 1 1.7923 -0.5138 -0.8900 28 1 1.5615 2.4679 1.2085 29 1 3.5346 1.7703 -0.0322 30 1 2.4992 1.0970 2.2184 31 1 2.9189 -4.5713 4.0333 32 1 2.7571 -6.5921 5.2776 33 1 2.3904 -6.1398 6.9980 34 1 5.8349 -10.3389 4.0968 35 1 5.6006 -7.6840 4.0276 36 1 5.9619 -5.0052 6.2038 37 1 5.2758 -5.7928 4.7171 38 1 2.2765 -3.8288 2.4815 There are 60 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 60 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_18339242_12360598.mol2 38 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 09:47:51 Heat of formation + Delta-G solvation = -24.527314 kcal Electronic energy + Delta-G solvation = -28131.050340 eV Core-core repulsion = 23581.175088 eV Total energy + Delta-G solvation = -4549.875252 eV No. of doubly occupied orbitals = 60 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 337.096 amu Computer time = 0.78 seconds Orbital eigenvalues (eV) -50.15020 -50.04245 -45.92468 -41.59779 -40.42776 -39.34297 -37.72338 -35.50397 -34.30748 -33.16873 -32.61573 -31.47936 -28.28925 -27.01829 -26.76190 -24.54271 -24.26596 -23.70497 -22.39836 -21.73177 -21.04035 -19.54871 -18.97952 -18.74095 -18.59784 -18.48254 -18.42992 -17.53294 -17.24512 -17.11327 -16.53023 -16.43464 -16.28247 -16.01515 -15.73046 -15.65900 -15.44240 -15.38851 -14.64613 -14.46506 -14.00083 -13.94452 -13.82952 -13.81240 -13.62938 -13.57654 -13.10802 -12.88395 -12.45418 -12.41854 -12.14847 -12.05469 -11.85509 -11.14094 -10.97188 -10.70402 -10.62091 -10.58149 -10.25650 -9.87364 -5.18200 -0.88721 -0.41053 0.51622 1.00242 1.18329 1.32736 1.48003 1.74669 1.77433 2.18221 2.28765 2.66096 2.74129 2.93219 3.01747 3.14500 3.20110 3.33429 3.40220 3.51712 3.58124 3.60805 3.74397 3.84887 3.94195 4.13628 4.15854 4.23361 4.29554 4.39451 4.46157 4.50244 4.56427 4.56651 4.59706 4.63576 4.74652 4.81012 4.94602 5.04261 5.26787 5.32873 6.20165 6.38275 6.94369 7.28334 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.540 6.540 2 C -0.079 4.079 3 Si 0.693 3.307 4 C -0.053 4.053 5 C -0.140 4.140 6 C 0.161 3.839 7 F -0.104 7.104 8 C -0.142 4.142 9 C 0.562 3.438 10 O -0.511 6.511 11 N -0.712 5.712 12 C 0.125 3.875 13 H 0.124 0.876 14 C -0.132 4.132 15 C -0.034 4.034 16 H 0.114 0.886 17 C 0.028 3.972 18 N -0.361 5.361 19 O 0.100 5.900 20 C -0.054 4.054 21 C -0.234 4.234 22 C -0.140 4.140 23 C -0.092 4.092 24 C 0.112 3.888 25 F -0.120 7.120 26 H 0.389 0.611 27 H 0.084 0.916 28 H -0.245 1.245 29 H -0.248 1.248 30 H 0.152 0.848 31 H 0.401 0.599 32 H 0.091 0.909 33 H 0.086 0.914 34 H 0.218 0.782 35 H 0.171 0.829 36 H 0.084 0.916 37 H 0.092 0.908 38 H 0.153 0.847 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.503 -0.472 -8.062 8.091 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.347 6.347 2 C -0.189 4.189 3 Si 0.593 3.407 4 C -0.055 4.055 5 C -0.158 4.158 6 C 0.140 3.860 7 F -0.082 7.082 8 C -0.146 4.146 9 C 0.349 3.651 10 O -0.387 6.387 11 N -0.364 5.364 12 C 0.021 3.979 13 H 0.142 0.858 14 C -0.171 4.171 15 C -0.053 4.053 16 H 0.132 0.868 17 C -0.131 4.131 18 N -0.064 5.064 19 O 0.034 5.966 20 C -0.136 4.136 21 C -0.256 4.256 22 C -0.179 4.179 23 C -0.112 4.112 24 C 0.093 3.907 25 F -0.098 7.098 26 H 0.237 0.763 27 H 0.102 0.898 28 H -0.169 1.169 29 H -0.173 1.173 30 H 0.169 0.831 31 H 0.237 0.763 32 H 0.109 0.891 33 H 0.104 0.896 34 H 0.234 0.766 35 H 0.188 0.812 36 H 0.102 0.898 37 H 0.110 0.890 38 H 0.171 0.829 Dipole moment (debyes) X Y Z Total from point charges -0.023 -0.055 -5.148 5.149 hybrid contribution 0.137 -0.570 -1.174 1.312 sum 0.115 -0.625 -6.322 6.354 Atomic orbital electron populations 1.86492 1.16139 1.82065 1.50004 1.24675 0.86730 1.11237 0.96257 0.94798 0.81254 0.77188 0.87465 1.19425 0.98401 0.92001 0.95627 1.20907 1.01637 1.01172 0.92093 1.17438 0.95251 0.88058 0.85214 1.91656 1.83522 1.77133 1.55853 1.19862 1.05750 0.92378 0.96606 1.17827 0.78782 0.82452 0.86086 1.90896 1.44111 1.65773 1.37883 1.45814 1.64156 1.06047 1.20390 1.22569 0.94118 0.92042 0.89194 0.85784 1.23401 0.96378 0.94391 1.02946 1.20677 0.97236 0.86510 1.00894 0.86791 1.23372 1.01839 0.95460 0.92425 1.73882 1.17798 0.95688 1.19059 1.84875 1.59442 1.30866 1.21465 1.26100 1.01173 0.96425 0.89884 1.22697 1.07786 0.95643 0.99435 1.23593 0.98318 0.95180 1.00822 1.21163 0.97631 1.01105 0.91262 1.17168 0.98834 0.88690 0.86043 1.91573 1.84260 1.77951 1.56003 0.76285 0.89766 1.16925 1.17253 0.83084 0.76262 0.89087 0.89575 0.76582 0.81190 0.89772 0.88977 0.82897 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 0.55 12.86 -35.23 -0.45 0.09 16 2 C -0.08 0.11 2.43 36.00 0.09 0.20 16 3 Si 0.69 -1.77 30.19 -169.99 -5.13 -6.90 16 4 C -0.05 -0.04 5.30 -104.49 -0.55 -0.59 16 5 C -0.14 -0.20 8.62 -39.57 -0.34 -0.54 16 6 C 0.16 0.44 7.28 -38.97 -0.28 0.15 16 7 F -0.10 -0.52 15.55 2.25 0.04 -0.48 16 8 C -0.14 -0.18 5.88 -104.92 -0.62 -0.79 16 9 C 0.56 1.22 7.77 -12.40 -0.10 1.12 16 10 O -0.51 -3.14 14.94 5.30 0.08 -3.06 16 11 N -0.71 0.88 5.31 -53.92 -0.29 0.59 16 12 C 0.13 -0.15 4.24 -67.02 -0.28 -0.43 16 13 H 0.12 0.04 7.46 -51.93 -0.39 -0.35 16 14 C -0.13 0.26 7.38 -25.92 -0.19 0.07 16 15 C -0.03 0.03 4.28 -90.96 -0.39 -0.36 16 16 H 0.11 -0.08 8.14 -51.93 -0.42 -0.50 16 17 C 0.03 0.02 6.69 -82.10 -0.55 -0.53 16 18 N -0.36 -1.14 12.07 33.42 0.40 -0.73 16 19 O 0.10 0.17 11.20 17.19 0.19 0.36 16 20 C -0.05 0.09 12.30 29.74 0.37 0.46 16 21 C -0.23 0.31 10.28 -39.38 -0.41 -0.10 16 22 C -0.14 0.24 7.30 -25.83 -0.19 0.06 16 23 C -0.09 0.09 9.51 -39.12 -0.37 -0.28 16 24 C 0.11 0.05 7.23 -39.49 -0.29 -0.24 16 25 F -0.12 -0.12 16.73 2.25 0.04 -0.08 16 26 H 0.39 -2.37 8.74 45.56 0.40 -1.97 16 27 H 0.08 -0.24 7.89 -51.93 -0.41 -0.65 16 28 H -0.24 -0.06 6.74 56.52 0.38 0.32 16 29 H -0.25 0.03 7.11 56.52 0.40 0.43 16 30 H 0.15 0.11 4.87 -52.49 -0.26 -0.15 16 31 H 0.40 -1.62 6.76 -40.82 -0.28 -1.89 16 32 H 0.09 -0.25 8.07 -51.93 -0.42 -0.67 16 33 H 0.09 -0.15 8.14 -51.93 -0.42 -0.58 16 34 H 0.22 -1.27 8.06 -52.49 -0.42 -1.69 16 35 H 0.17 -0.63 7.13 -52.48 -0.37 -1.01 16 36 H 0.08 -0.10 8.14 -51.93 -0.42 -0.52 16 37 H 0.09 -0.26 6.63 -51.93 -0.34 -0.60 16 38 H 0.15 -0.66 6.41 -52.48 -0.34 -0.99 16 LS Contribution 335.63 15.07 5.06 5.06 Total: 0.00 -10.28 335.63 -7.48 -17.77 By element: Atomic # 1 Polarization: -7.50 SS G_CDS: -3.31 Total: -10.82 kcal Atomic # 6 Polarization: 2.30 SS G_CDS: -4.10 Total: -1.81 kcal Atomic # 7 Polarization: -0.26 SS G_CDS: 0.12 Total: -0.14 kcal Atomic # 8 Polarization: -2.42 SS G_CDS: -0.18 Total: -2.60 kcal Atomic # 9 Polarization: -0.63 SS G_CDS: 0.07 Total: -0.56 kcal Atomic # 14 Polarization: -1.77 SS G_CDS: -5.13 Total: -6.90 kcal Total LS contribution 5.06 Total: 5.06 kcal Total: -10.28 -7.48 -17.77 kcal The number of atoms in the molecule is 38 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_18339242_12360598.mol2 38 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -6.760 kcal (2) G-P(sol) polarization free energy of solvation -10.285 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -17.045 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.483 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -17.768 kcal (6) G-S(sol) free energy of system = (1) + (5) -24.527 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.78 seconds