Wall clock time and date at job start Sun Mar 7 2021 09:47:50 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42903 * 1 3 3 Si 1.86299 * 109.46927 * 2 1 4 4 C 1.50698 * 109.47436 * 119.99939 * 2 1 3 5 5 C 1.38182 * 119.84439 * 255.02280 * 4 2 1 6 6 C 1.38314 * 120.14409 * 179.76242 * 5 4 2 7 7 F 1.35101 * 120.08339 * 180.25341 * 6 5 4 8 8 C 1.39805 * 119.83286 * 0.47124 * 6 5 4 9 9 C 1.47690 * 120.15536 * 179.79114 * 8 6 5 10 10 O 1.21576 * 120.00314 * 359.71536 * 9 8 6 11 11 N 1.34778 * 120.00070 * 179.71828 * 9 8 6 12 12 C 1.46508 * 120.00070 * 179.97438 * 11 9 8 13 13 H 1.08996 * 112.84794 * 23.80324 * 12 11 9 14 14 C 1.53777 * 113.61317 * 154.99976 * 12 11 9 15 15 C 1.53773 * 87.08030 * 140.06390 * 14 12 11 16 16 H 1.09004 * 113.61300 * 89.20395 * 15 14 12 17 17 C 1.50708 * 113.61631 * 220.01783 * 15 14 12 18 18 N 1.30171 * 126.80178 * 263.49360 * 17 15 14 19 19 O 1.20923 * 111.60389 * 179.97438 * 18 17 15 20 20 C 1.34034 * 111.56833 * 0.02562 * 19 18 17 21 21 C 1.35451 * 106.44611 * 359.97438 * 20 19 18 22 22 C 1.53782 * 87.17712 * 334.60979 * 15 14 12 23 23 C 1.39657 * 119.68718 * 359.50717 * 8 6 5 24 24 C 1.38062 * 119.85472 * 0.25713 * 23 8 6 25 25 F 1.35098 * 119.91911 * 180.02562 * 24 23 8 26 26 H 0.96696 * 114.00117 * 60.00135 * 1 2 3 27 27 H 1.09003 * 109.46932 * 240.00186 * 2 1 3 28 28 H 1.48494 * 110.00161 * 60.00391 * 3 2 1 29 29 H 1.48501 * 109.99823 * 181.32239 * 3 2 1 30 30 H 1.07999 * 119.93180 * 359.97438 * 5 4 2 31 31 H 0.96997 * 120.00359 * 359.97438 * 11 9 8 32 32 H 1.09003 * 113.61514 * 25.51890 * 14 12 11 33 33 H 1.08994 * 113.69453 * 254.62641 * 14 12 11 34 34 H 1.08002 * 126.78139 * 180.02562 * 20 19 18 35 35 H 1.08005 * 128.00874 * 180.02562 * 21 20 19 36 36 H 1.08998 * 113.61546 * 139.93390 * 22 15 14 37 37 H 1.09005 * 113.61220 * 270.84409 * 22 15 14 38 38 H 1.08005 * 120.07198 * 180.23483 * 23 8 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9314 -0.7104 1.2304 5 6 2.4527 0.0198 2.2814 6 6 2.9111 -0.6255 3.4156 7 9 3.4158 0.0900 4.4445 8 6 2.8550 -2.0202 3.4929 9 6 3.3467 -2.7169 4.6988 10 8 3.8064 -2.0777 5.6252 11 7 3.2859 -4.0613 4.7723 12 6 3.7742 -4.7524 5.9683 13 1 3.7708 -4.1181 6.8546 14 6 3.1250 -6.1282 6.1928 15 6 4.5154 -6.6270 6.6203 16 1 4.7141 -6.5065 7.6852 17 6 4.8420 -8.0094 6.1167 18 7 4.7058 -9.1286 6.7673 19 8 5.0510 -10.0762 6.1001 20 6 5.4736 -9.6964 4.8862 21 6 5.3569 -8.3475 4.8442 22 6 5.1022 -5.5008 5.7529 23 6 2.3263 -2.7513 2.4268 24 6 1.8679 -2.0937 1.3028 25 9 1.3558 -2.7995 0.2710 26 1 -0.3933 0.4417 -0.7650 27 1 1.7923 -0.5138 -0.8900 28 1 1.5615 2.4679 1.2085 29 1 3.5346 1.7703 -0.0322 30 1 2.4992 1.0970 2.2184 31 1 2.9189 -4.5713 4.0333 32 1 2.7571 -6.5921 5.2776 33 1 2.3904 -6.1398 6.9980 34 1 5.8349 -10.3389 4.0968 35 1 5.6006 -7.6840 4.0276 36 1 5.9619 -5.0052 6.2038 37 1 5.2758 -5.7928 4.7171 38 1 2.2765 -3.8288 2.4815 There are 60 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 60 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_18339242_12360598.mol2 38 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 09:47:50 Heat of formation + Delta-G solvation = -25.792099 kcal Electronic energy + Delta-G solvation = -28131.105186 eV Core-core repulsion = 23581.175088 eV Total energy + Delta-G solvation = -4549.930098 eV No. of doubly occupied orbitals = 60 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 337.096 amu Computer time = 0.89 seconds Orbital eigenvalues (eV) -50.28497 -50.18002 -45.90187 -41.66255 -40.41197 -39.40882 -37.62644 -35.55197 -34.31004 -33.14472 -32.56586 -31.53296 -28.28209 -26.89704 -26.72762 -24.55934 -24.23044 -23.70040 -22.39155 -21.76762 -20.97930 -19.57762 -18.94092 -18.64317 -18.60577 -18.52084 -18.48779 -17.59424 -17.28293 -17.18698 -16.61109 -16.41135 -16.27822 -16.06142 -15.80445 -15.72566 -15.37065 -15.35672 -14.65011 -14.37261 -13.97714 -13.91331 -13.88332 -13.72791 -13.62443 -13.44160 -13.17393 -12.86053 -12.42708 -12.40170 -12.12202 -11.96366 -11.81106 -11.30320 -10.89251 -10.75004 -10.57012 -10.43265 -10.27469 -9.95086 -5.01259 -0.94336 -0.46733 0.61732 1.16222 1.23775 1.28549 1.61040 1.74345 1.88887 2.10318 2.47114 2.62881 2.71484 2.94071 3.09830 3.18533 3.26700 3.37801 3.49481 3.58937 3.63364 3.73703 3.84695 3.96093 4.02094 4.20178 4.24333 4.28875 4.37771 4.46210 4.52702 4.56669 4.61612 4.63130 4.71338 4.74150 4.84499 4.92725 5.05778 5.15600 5.23549 5.38776 6.23518 6.80915 6.90241 7.35208 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.558 6.558 2 C -0.086 4.086 3 Si 0.780 3.220 4 C -0.062 4.062 5 C -0.148 4.148 6 C 0.137 3.863 7 F -0.125 7.125 8 C -0.147 4.147 9 C 0.561 3.439 10 O -0.560 6.560 11 N -0.692 5.692 12 C 0.123 3.877 13 H 0.105 0.895 14 C -0.120 4.120 15 C -0.038 4.038 16 H 0.103 0.897 17 C 0.020 3.980 18 N -0.406 5.406 19 O 0.078 5.922 20 C -0.047 4.047 21 C -0.239 4.239 22 C -0.129 4.129 23 C -0.071 4.071 24 C 0.108 3.892 25 F -0.119 7.119 26 H 0.410 0.590 27 H 0.105 0.895 28 H -0.288 1.288 29 H -0.283 1.283 30 H 0.150 0.850 31 H 0.418 0.582 32 H 0.107 0.893 33 H 0.083 0.917 34 H 0.256 0.744 35 H 0.197 0.803 36 H 0.075 0.925 37 H 0.111 0.889 38 H 0.191 0.809 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.926 -1.811 -10.564 10.758 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.369 6.369 2 C -0.195 4.195 3 Si 0.685 3.315 4 C -0.063 4.063 5 C -0.166 4.166 6 C 0.116 3.884 7 F -0.104 7.104 8 C -0.151 4.151 9 C 0.348 3.652 10 O -0.439 6.439 11 N -0.344 5.344 12 C 0.018 3.982 13 H 0.123 0.877 14 C -0.158 4.158 15 C -0.058 4.058 16 H 0.122 0.878 17 C -0.138 4.138 18 N -0.112 5.112 19 O 0.015 5.985 20 C -0.128 4.128 21 C -0.261 4.261 22 C -0.169 4.169 23 C -0.090 4.090 24 C 0.089 3.911 25 F -0.097 7.097 26 H 0.262 0.738 27 H 0.123 0.877 28 H -0.216 1.216 29 H -0.210 1.210 30 H 0.167 0.833 31 H 0.257 0.743 32 H 0.125 0.875 33 H 0.102 0.898 34 H 0.272 0.728 35 H 0.214 0.786 36 H 0.094 0.906 37 H 0.129 0.871 38 H 0.208 0.792 Dipole moment (debyes) X Y Z Total from point charges -0.475 -1.450 -7.713 7.863 hybrid contribution 0.271 -0.172 -0.424 0.532 sum -0.204 -1.622 -8.137 8.300 Atomic orbital electron populations 1.86439 1.16084 1.82643 1.51741 1.24820 0.86922 1.11795 0.95976 0.93893 0.77853 0.74808 0.84954 1.19757 0.97876 0.92648 0.96061 1.20934 1.02184 1.01281 0.92217 1.17786 0.96427 0.88919 0.85270 1.91594 1.84119 1.77736 1.56912 1.19834 1.06398 0.91810 0.97036 1.17993 0.78243 0.83226 0.85716 1.90876 1.46540 1.66933 1.39569 1.45672 1.62942 1.04988 1.20781 1.22509 0.95068 0.92031 0.88611 0.87746 1.23348 0.95706 0.93276 1.03512 1.20680 0.98218 0.86289 1.00566 0.87846 1.23733 1.01438 0.95353 0.93324 1.73881 1.20038 0.96661 1.20667 1.84818 1.60037 1.30869 1.22783 1.26906 0.99477 0.97126 0.89245 1.23053 1.07565 0.96240 0.99203 1.23559 0.97453 0.94243 1.01595 1.21437 0.95295 1.02674 0.89601 1.17259 0.98902 0.88613 0.86369 1.91577 1.84274 1.77852 1.56028 0.73793 0.87720 1.21597 1.20960 0.83283 0.74271 0.87487 0.89833 0.72796 0.78623 0.90590 0.87104 0.79184 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.56 1.78 12.86 -148.98 -1.92 -0.14 16 2 C -0.09 0.31 2.43 71.24 0.17 0.49 16 3 Si 0.78 -3.79 30.19 68.60 2.07 -1.72 16 4 C -0.06 -0.08 5.30 -19.78 -0.10 -0.19 16 5 C -0.15 -0.61 8.62 22.27 0.19 -0.42 16 6 C 0.14 0.97 7.28 22.67 0.17 1.14 16 7 F -0.13 -1.62 15.55 44.97 0.70 -0.92 16 8 C -0.15 -0.41 5.88 -20.06 -0.12 -0.53 16 9 C 0.56 2.77 7.77 86.74 0.67 3.44 16 10 O -0.56 -8.07 14.94 -3.96 -0.06 -8.13 16 11 N -0.69 2.24 5.31 -442.76 -2.35 -0.11 16 12 C 0.12 -0.27 4.24 45.57 0.19 -0.08 16 13 H 0.10 0.25 7.46 -2.39 -0.02 0.23 16 14 C -0.12 0.52 7.38 31.12 0.23 0.75 16 15 C -0.04 0.06 4.28 -11.01 -0.05 0.01 16 16 H 0.10 0.03 8.14 -2.38 -0.02 0.01 16 17 C 0.02 0.03 6.69 43.58 0.29 0.32 16 18 N -0.41 -2.86 12.07 -49.56 -0.60 -3.46 16 19 O 0.08 0.28 11.20 71.69 0.80 1.08 16 20 C -0.05 0.23 12.30 67.18 0.83 1.06 16 21 C -0.24 1.03 10.28 22.40 0.23 1.26 16 22 C -0.13 0.50 7.30 31.18 0.23 0.73 16 23 C -0.07 0.25 9.51 22.57 0.21 0.46 16 24 C 0.11 -0.05 7.23 22.33 0.16 0.11 16 25 F -0.12 0.02 16.73 44.97 0.75 0.77 16 26 H 0.41 -5.64 8.74 -74.06 -0.65 -6.28 16 27 H 0.11 -0.80 7.89 -2.39 -0.02 -0.82 16 28 H -0.29 -0.64 6.74 99.48 0.67 0.03 16 29 H -0.28 -0.20 7.11 99.48 0.71 0.50 16 30 H 0.15 0.53 4.87 -2.91 -0.01 0.52 16 31 H 0.42 -4.36 6.76 -92.71 -0.63 -4.99 16 32 H 0.11 -0.79 8.07 -2.39 -0.02 -0.81 16 33 H 0.08 -0.29 8.14 -2.39 -0.02 -0.31 16 34 H 0.26 -3.69 8.06 -2.91 -0.02 -3.72 16 35 H 0.20 -2.05 7.13 -2.91 -0.02 -2.07 16 36 H 0.08 -0.13 8.14 -2.39 -0.02 -0.15 16 37 H 0.11 -0.85 6.63 -2.38 -0.02 -0.86 16 38 H 0.19 -2.27 6.41 -2.91 -0.02 -2.29 16 Total: 0.00 -27.69 335.63 2.61 -25.08 By element: Atomic # 1 Polarization: -20.90 SS G_CDS: -0.10 Total: -21.01 kcal Atomic # 6 Polarization: 5.25 SS G_CDS: 3.31 Total: 8.56 kcal Atomic # 7 Polarization: -0.62 SS G_CDS: -2.95 Total: -3.57 kcal Atomic # 8 Polarization: -6.01 SS G_CDS: -1.17 Total: -7.19 kcal Atomic # 9 Polarization: -1.60 SS G_CDS: 1.45 Total: -0.15 kcal Atomic # 14 Polarization: -3.79 SS G_CDS: 2.07 Total: -1.72 kcal Total: -27.69 2.61 -25.08 kcal The number of atoms in the molecule is 38 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_18339242_12360598.mol2 38 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -0.707 kcal (2) G-P(sol) polarization free energy of solvation -27.691 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -28.398 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 2.606 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -25.085 kcal (6) G-S(sol) free energy of system = (1) + (5) -25.792 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.89 seconds