Wall clock time and date at job start Sun Mar 7 2021 09:48:02 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42906 * 1 3 3 Si 1.86294 * 109.47229 * 2 1 4 4 C 1.50700 * 109.46742 * 239.99910 * 2 1 3 5 5 C 1.35090 * 126.07502 * 105.23319 * 4 2 1 6 6 N 1.35037 * 107.98313 * 180.12292 * 5 4 2 7 7 C 1.46493 * 125.93273 * 179.83207 * 6 5 4 8 8 C 1.50702 * 109.46957 * 124.71925 * 7 6 5 9 9 O 1.21284 * 120.00143 * 0.02562 * 8 7 6 10 10 N 1.34779 * 120.00445 * 180.02562 * 8 7 6 11 11 C 1.46495 * 120.00432 * 179.72551 * 10 8 7 12 12 H 1.08995 * 112.84810 * 24.07219 * 11 10 8 13 13 C 1.53777 * 113.61729 * 155.27269 * 11 10 8 14 14 C 1.53777 * 87.08274 * 139.97628 * 13 11 10 15 15 H 1.09004 * 113.61123 * 89.11665 * 14 13 11 16 16 C 1.50694 * 113.61693 * 219.93081 * 14 13 11 17 17 N 1.30177 * 126.80661 * 264.69141 * 16 14 13 18 18 O 1.20921 * 111.60516 * 179.79599 * 17 16 14 19 19 C 1.34040 * 111.56948 * 0.48582 * 18 17 16 20 20 C 1.35459 * 106.44153 * 359.70853 * 19 18 17 21 21 C 1.53782 * 87.08328 * 334.57008 * 14 13 11 22 22 N 1.40072 * 108.13425 * 359.57641 * 6 5 4 23 23 C 1.31615 * 108.11094 * 0.26156 * 22 6 5 24 24 C 1.48421 * 126.03944 * 179.97438 * 23 22 6 25 25 C 1.39327 * 120.12315 * 136.98069 * 24 23 22 26 26 C 1.38022 * 119.87451 * 179.71746 * 25 24 23 27 27 C 1.38312 * 120.12392 * 0.55214 * 26 25 24 28 28 C 1.38325 * 120.24145 * 359.72126 * 27 26 25 29 29 C 1.38023 * 120.11925 * 359.97438 * 28 27 26 30 30 H 0.96694 * 114.00211 * 59.99711 * 1 2 3 31 31 H 1.08994 * 109.47410 * 120.00385 * 2 1 3 32 32 H 1.48506 * 110.00040 * 59.99987 * 3 2 1 33 33 H 1.48493 * 110.00240 * 181.32047 * 3 2 1 34 34 H 1.08007 * 126.00906 * 359.97438 * 5 4 2 35 35 H 1.09003 * 109.47324 * 4.72162 * 7 6 5 36 36 H 1.08999 * 109.47463 * 244.71470 * 7 6 5 37 37 H 0.97010 * 119.99519 * 359.97438 * 10 8 7 38 38 H 1.09003 * 113.61900 * 254.53347 * 13 11 10 39 39 H 1.09001 * 113.61401 * 25.43004 * 13 11 10 40 40 H 1.07997 * 126.78301 * 179.72787 * 19 18 17 41 41 H 1.07995 * 128.00408 * 180.02562 * 20 19 18 42 42 H 1.08995 * 113.61078 * 270.88416 * 21 14 13 43 43 H 1.08994 * 113.61370 * 139.97786 * 21 14 13 44 44 H 1.07997 * 120.05868 * 359.96897 * 25 24 23 45 45 H 1.08011 * 119.93510 * 180.27068 * 26 25 24 46 46 H 1.07996 * 119.88140 * 179.69414 * 27 26 25 47 47 H 1.07999 * 119.93752 * 180.02562 * 28 27 26 48 48 H 1.07995 * 120.06177 * 180.02562 * 29 28 27 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4291 0.0000 0.0000 3 14 2.0501 1.7564 0.0000 4 6 1.9313 -0.7104 -1.2305 5 6 2.4669 -0.1253 -2.3239 6 7 2.7883 -1.0990 -3.2026 7 6 3.3925 -0.9008 -4.5224 8 6 4.6595 -1.7107 -4.6214 9 8 5.0218 -2.3873 -3.6823 10 7 5.3902 -1.6834 -5.7537 11 6 6.6250 -2.4659 -5.8478 12 1 6.6411 -3.3150 -5.1645 13 6 7.0162 -2.8284 -7.2901 14 6 8.4712 -2.5399 -6.8846 15 1 8.9934 -3.4089 -6.4844 16 6 9.2621 -1.8193 -7.9458 17 7 10.0414 -2.3583 -8.8384 18 8 10.5382 -1.5232 -9.5582 19 6 10.1491 -0.2861 -9.2194 20 6 9.3096 -0.4235 -8.1652 21 6 7.9018 -1.6101 -5.8001 22 7 2.4490 -2.3318 -2.6307 23 6 1.9321 -2.1029 -1.4421 24 6 1.4370 -3.1306 -0.4926 25 6 1.7386 -3.0323 0.8641 26 6 1.2706 -3.9877 1.7434 27 6 0.5132 -5.0474 1.2784 28 6 0.2155 -5.1530 -0.0683 29 6 0.6731 -4.1999 -0.9555 30 1 -0.3933 0.4417 -0.7650 31 1 1.7924 -0.5139 0.8899 32 1 1.5615 2.4679 1.2085 33 1 3.5346 1.7702 -0.0322 34 1 2.6104 0.9351 -2.4707 35 1 3.6246 0.1552 -4.6609 36 1 2.6938 -1.2236 -5.2941 37 1 5.1002 -1.1425 -6.5050 38 1 6.8322 -3.8726 -7.5432 39 1 6.6252 -2.1360 -8.0357 40 1 10.4459 0.6378 -9.6934 41 1 8.7952 0.3534 -7.6192 42 1 7.7529 -0.5847 -6.1383 43 1 8.4328 -1.6708 -4.8502 44 1 2.3341 -2.2078 1.2275 45 1 1.5002 -3.9100 2.7960 46 1 0.1532 -5.7954 1.9692 47 1 -0.3766 -5.9823 -0.4260 48 1 0.4398 -4.2830 -2.0067 There are 69 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 69 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_18339242_12622748.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 09:48:02 Heat of formation + Delta-G solvation = 144.468217 kcal Electronic energy + Delta-G solvation = -33379.815116 eV Core-core repulsion = 28794.032911 eV Total energy + Delta-G solvation = -4585.782205 eV No. of doubly occupied orbitals = 69 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 381.152 amu Computer time = 1.30 seconds Orbital eigenvalues (eV) -45.94822 -42.45520 -41.26950 -39.78976 -39.43598 -37.62185 -35.44244 -34.78675 -33.96218 -32.66839 -32.23526 -31.81457 -31.29910 -28.97314 -27.04581 -26.92445 -25.89122 -24.30706 -23.92500 -23.29819 -22.52624 -21.74076 -21.53854 -21.07187 -20.73392 -18.96635 -18.67470 -18.52810 -18.40809 -17.64590 -17.44867 -17.08568 -16.60819 -16.49994 -16.20325 -16.07789 -15.86280 -15.54614 -15.37394 -15.32364 -14.92669 -14.56826 -14.37007 -14.20921 -14.14331 -13.96780 -13.88968 -13.87568 -13.66687 -13.52189 -13.26725 -12.90867 -12.45261 -12.39975 -12.31464 -12.08417 -11.99493 -11.86336 -11.76547 -11.63935 -11.20310 -11.00327 -10.64946 -10.54435 -10.24396 -10.19051 -9.69474 -9.67241 -9.19431 -5.09081 0.28791 0.49228 0.65121 0.80456 1.15821 1.21173 1.35447 1.39048 1.63710 1.84207 1.94561 2.00662 2.26559 2.98289 3.05287 3.15180 3.25508 3.38558 3.40848 3.54717 3.58610 3.64640 3.71575 3.73032 3.81745 3.84046 4.10672 4.11169 4.17149 4.22330 4.27330 4.33771 4.43282 4.46659 4.47310 4.53598 4.58106 4.62765 4.68039 4.72723 4.78641 4.84918 4.89627 4.92470 5.03396 5.11487 5.25559 5.31311 5.41568 5.71318 5.74685 5.76626 5.83062 6.18248 6.24286 6.68312 6.73631 7.00646 7.26151 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.538 6.538 2 C -0.028 4.028 3 Si 0.680 3.320 4 C -0.250 4.250 5 C 0.064 3.936 6 N -0.359 5.359 7 C 0.116 3.884 8 C 0.499 3.501 9 O -0.502 6.502 10 N -0.719 5.719 11 C 0.127 3.873 12 H 0.121 0.879 13 C -0.131 4.131 14 C -0.034 4.034 15 H 0.113 0.887 16 C 0.028 3.972 17 N -0.361 5.361 18 O 0.100 5.900 19 C -0.055 4.055 20 C -0.234 4.234 21 C -0.140 4.140 22 N -0.248 5.248 23 C 0.132 3.868 24 C -0.007 4.007 25 C -0.093 4.093 26 C -0.119 4.119 27 C -0.113 4.113 28 C -0.120 4.120 29 C -0.091 4.091 30 H 0.375 0.625 31 H 0.112 0.888 32 H -0.253 1.253 33 H -0.256 1.256 34 H 0.181 0.819 35 H 0.129 0.871 36 H 0.119 0.881 37 H 0.403 0.597 38 H 0.084 0.916 39 H 0.091 0.909 40 H 0.218 0.782 41 H 0.171 0.829 42 H 0.092 0.908 43 H 0.081 0.919 44 H 0.121 0.879 45 H 0.125 0.875 46 H 0.124 0.876 47 H 0.125 0.875 48 H 0.123 0.877 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.278 7.512 -5.510 9.403 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.342 6.342 2 C -0.140 4.140 3 Si 0.582 3.418 4 C -0.262 4.262 5 C -0.081 4.081 6 N -0.141 5.141 7 C -0.010 4.010 8 C 0.282 3.718 9 O -0.374 6.374 10 N -0.372 5.372 11 C 0.023 3.977 12 H 0.139 0.861 13 C -0.170 4.170 14 C -0.054 4.054 15 H 0.131 0.869 16 C -0.131 4.131 17 N -0.064 5.064 18 O 0.034 5.966 19 C -0.136 4.136 20 C -0.255 4.255 21 C -0.179 4.179 22 N -0.068 5.068 23 C -0.035 4.035 24 C -0.009 4.009 25 C -0.113 4.113 26 C -0.137 4.137 27 C -0.131 4.131 28 C -0.138 4.138 29 C -0.110 4.110 30 H 0.221 0.779 31 H 0.129 0.871 32 H -0.178 1.178 33 H -0.181 1.181 34 H 0.197 0.803 35 H 0.147 0.853 36 H 0.137 0.863 37 H 0.237 0.763 38 H 0.103 0.897 39 H 0.109 0.891 40 H 0.234 0.766 41 H 0.188 0.812 42 H 0.110 0.890 43 H 0.100 0.900 44 H 0.139 0.861 45 H 0.143 0.857 46 H 0.142 0.858 47 H 0.143 0.857 48 H 0.141 0.859 Dipole moment (debyes) X Y Z Total from point charges 0.327 5.200 -5.151 7.327 hybrid contribution -0.377 1.243 0.474 1.383 sum -0.050 6.444 -4.678 7.963 Atomic orbital electron populations 1.86529 1.17257 1.81666 1.48752 1.24403 0.84928 1.08673 0.96003 0.95414 0.80762 0.77678 0.87974 1.20461 1.13269 0.93264 0.99195 1.22214 1.00289 0.95279 0.90309 1.47845 1.48100 1.04376 1.13745 1.21520 0.94081 1.02361 0.83000 1.20612 0.85047 0.82855 0.83248 1.90845 1.69712 1.39884 1.36986 1.45861 1.25169 1.49597 1.16576 1.22460 0.82201 0.95274 0.97814 0.86132 1.23393 0.93861 1.03417 0.96362 1.20673 0.93386 0.98759 0.92568 0.86913 1.23373 0.99153 0.92175 0.98407 1.73887 1.11643 1.15448 1.05438 1.84878 1.53672 1.12998 1.45097 1.26106 0.98683 0.90508 0.98304 1.22686 1.05037 0.96476 1.01331 1.23550 0.96239 0.99087 0.99011 1.77810 1.18160 1.01533 1.09282 1.20593 0.97866 0.92395 0.92622 1.17696 0.98647 0.93244 0.91313 1.21075 0.99340 0.98863 0.91991 1.21064 0.98351 0.94649 0.99665 1.21248 0.98057 0.98041 0.95772 1.21103 1.00283 0.99013 0.93430 1.21163 0.96809 0.93197 0.99851 0.77853 0.87089 1.17761 1.18079 0.80263 0.85291 0.86305 0.76262 0.89737 0.89070 0.76581 0.81196 0.89002 0.90042 0.86121 0.85679 0.85839 0.85693 0.85869 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 -0.65 12.88 -35.23 -0.45 -1.10 16 2 C -0.03 -0.02 2.52 36.01 0.09 0.07 16 3 Si 0.68 -0.82 30.74 -169.99 -5.22 -6.04 16 4 C -0.25 -0.45 5.35 -104.76 -0.56 -1.01 16 5 C 0.06 -0.03 9.96 -17.26 -0.17 -0.20 16 6 N -0.36 -0.40 3.40 -62.58 -0.21 -0.61 16 7 C 0.12 -0.36 6.99 -5.20 -0.04 -0.40 16 8 C 0.50 -0.04 7.86 -10.98 -0.09 -0.12 16 9 O -0.50 -2.80 15.30 5.55 0.08 -2.71 16 10 N -0.72 2.24 5.35 -53.02 -0.28 1.96 16 11 C 0.13 -0.23 4.24 -67.12 -0.28 -0.51 16 12 H 0.12 0.06 7.47 -51.93 -0.39 -0.33 16 13 C -0.13 0.32 7.38 -25.92 -0.19 0.13 16 14 C -0.03 0.04 4.29 -90.96 -0.39 -0.35 16 15 H 0.11 -0.07 8.14 -51.93 -0.42 -0.50 16 16 C 0.03 0.01 6.70 -82.10 -0.55 -0.54 16 17 N -0.36 -1.03 12.07 33.42 0.40 -0.63 16 18 O 0.10 0.14 11.20 17.18 0.19 0.33 16 19 C -0.05 0.12 12.30 29.74 0.37 0.48 16 20 C -0.23 0.43 10.28 -39.38 -0.40 0.02 16 21 C -0.14 0.32 7.27 -25.92 -0.19 0.13 16 22 N -0.25 -1.24 11.67 33.43 0.39 -0.85 16 23 C 0.13 0.59 6.66 -82.78 -0.55 0.04 16 24 C -0.01 -0.03 5.74 -104.89 -0.60 -0.63 16 25 C -0.09 -0.34 8.88 -39.26 -0.35 -0.69 16 26 C -0.12 -0.31 10.03 -39.63 -0.40 -0.71 16 27 C -0.11 -0.26 10.04 -39.52 -0.40 -0.65 16 28 C -0.12 -0.32 10.03 -39.63 -0.40 -0.72 16 29 C -0.09 -0.36 9.78 -39.25 -0.38 -0.74 16 30 H 0.37 -1.08 8.70 45.56 0.40 -0.69 16 31 H 0.11 0.20 5.56 -51.93 -0.29 -0.09 16 32 H -0.25 -0.54 7.11 56.52 0.40 -0.14 16 33 H -0.26 -0.35 7.11 56.52 0.40 0.06 16 34 H 0.18 -0.89 6.40 -52.48 -0.34 -1.23 16 35 H 0.13 -0.97 8.07 -51.93 -0.42 -1.39 16 36 H 0.12 -0.62 8.14 -51.93 -0.42 -1.04 16 37 H 0.40 -2.62 8.73 -40.82 -0.36 -2.97 16 38 H 0.08 -0.16 8.14 -51.93 -0.42 -0.59 16 39 H 0.09 -0.31 8.07 -51.93 -0.42 -0.73 16 40 H 0.22 -1.37 8.06 -52.49 -0.42 -1.79 16 41 H 0.17 -0.75 7.13 -52.49 -0.37 -1.12 16 42 H 0.09 -0.33 6.63 -51.93 -0.34 -0.68 16 43 H 0.08 -0.10 8.14 -51.93 -0.42 -0.53 16 44 H 0.12 0.31 6.23 -52.49 -0.33 -0.02 16 45 H 0.13 0.07 8.06 -52.48 -0.42 -0.36 16 46 H 0.12 0.02 8.06 -52.49 -0.42 -0.41 16 47 H 0.13 0.07 8.06 -52.49 -0.42 -0.35 16 48 H 0.12 0.41 8.06 -52.49 -0.42 -0.01 16 LS Contribution 408.97 15.07 6.16 6.16 Total: 0.00 -14.50 408.97 -10.29 -24.79 By element: Atomic # 1 Polarization: -9.03 SS G_CDS: -5.86 Total: -14.89 kcal Atomic # 6 Polarization: -0.92 SS G_CDS: -5.49 Total: -6.41 kcal Atomic # 7 Polarization: -0.43 SS G_CDS: 0.30 Total: -0.13 kcal Atomic # 8 Polarization: -3.31 SS G_CDS: -0.18 Total: -3.48 kcal Atomic # 14 Polarization: -0.82 SS G_CDS: -5.22 Total: -6.04 kcal Total LS contribution 6.16 Total: 6.16 kcal Total: -14.50 -10.29 -24.79 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_18339242_12622748.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 169.253 kcal (2) G-P(sol) polarization free energy of solvation -14.499 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 154.755 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.286 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -24.785 kcal (6) G-S(sol) free energy of system = (1) + (5) 144.468 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.31 seconds