Wall clock time and date at job start Sun Mar 7 2021 09:48:42 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42901 * 1 3 3 Si 1.86300 * 109.47072 * 2 1 4 4 C 1.50699 * 109.47057 * 120.00135 * 2 1 3 5 5 C 1.38581 * 120.32170 * 64.72188 * 4 2 1 6 6 C 1.38637 * 118.48554 * 180.25099 * 5 4 2 7 7 C 1.39266 * 119.06238 * 0.04323 * 6 5 4 8 8 C 1.48164 * 119.72594 * 179.97438 * 7 6 5 9 9 O 1.21515 * 119.99713 * 359.97438 * 8 7 6 10 10 N 1.34778 * 120.00155 * 179.97438 * 8 7 6 11 11 C 1.46505 * 119.99703 * 180.02562 * 10 8 7 12 12 H 1.08993 * 112.85004 * 336.19118 * 11 10 8 13 13 C 1.53783 * 113.61482 * 107.50448 * 11 10 8 14 14 C 1.53782 * 87.08237 * 139.97747 * 13 11 10 15 15 H 1.08997 * 113.61274 * 89.11447 * 14 13 11 16 16 C 1.50694 * 113.61202 * 220.01868 * 14 13 11 17 17 N 1.30180 * 126.80125 * 192.52057 * 16 14 13 18 18 O 1.20926 * 111.60418 * 179.97438 * 17 16 14 19 19 C 1.34038 * 111.56693 * 359.97438 * 18 17 16 20 20 C 1.35449 * 106.44591 * 359.75066 * 19 18 17 21 21 C 1.53779 * 87.07900 * 334.56609 * 14 13 11 22 22 N 1.32747 * 120.55287 * 359.95519 * 7 6 5 23 23 C 1.31491 * 121.64663 * 0.02562 * 22 7 6 24 24 H 0.96699 * 113.99948 * 299.99908 * 1 2 3 25 25 H 1.09004 * 109.46942 * 240.00044 * 2 1 3 26 26 H 1.48499 * 109.99891 * 300.00012 * 3 2 1 27 27 H 1.48497 * 109.99800 * 61.32124 * 3 2 1 28 28 H 1.07998 * 120.76266 * 0.25543 * 5 4 2 29 29 H 1.07996 * 120.46915 * 180.02562 * 6 5 4 30 30 H 0.96995 * 120.00493 * 359.97438 * 10 8 7 31 31 H 1.08999 * 113.61128 * 254.52622 * 13 11 10 32 32 H 1.08994 * 113.61258 * 25.42444 * 13 11 10 33 33 H 1.08004 * 126.77548 * 180.02562 * 19 18 17 34 34 H 1.08003 * 128.00466 * 180.23008 * 20 19 18 35 35 H 1.09006 * 113.61472 * 270.88199 * 21 14 13 36 36 H 1.08999 * 113.68913 * 139.99360 * 21 14 13 37 37 H 1.07999 * 119.55542 * 179.97438 * 23 22 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9313 -0.7104 1.2304 5 6 1.6829 -2.0622 1.4083 6 6 2.1581 -2.6763 2.5568 7 6 2.8639 -1.9174 3.4871 8 6 3.3779 -2.5587 4.7200 9 8 3.1826 -3.7419 4.9161 10 7 4.0621 -1.8296 5.6238 11 6 4.5707 -2.4639 6.8426 12 1 4.0167 -3.3621 7.1152 13 6 6.0968 -2.6539 6.8473 14 6 6.0639 -2.2477 8.3301 15 1 5.9193 -3.0876 9.0097 16 6 7.2072 -1.3542 8.7367 17 7 7.5610 -1.0440 9.9505 18 8 8.5190 -0.3061 9.9602 19 6 8.9363 -0.0241 8.7180 20 6 8.1124 -0.6922 7.8757 21 6 4.7682 -1.4836 8.0108 22 7 3.0803 -0.6244 3.2785 23 6 2.6413 -0.0170 2.1980 24 1 -0.3933 0.4417 0.7651 25 1 1.7923 -0.5138 -0.8900 26 1 1.5615 2.4679 -1.2085 27 1 1.5879 2.4585 1.2242 28 1 1.1318 -2.6244 0.6690 29 1 1.9832 -3.7282 2.7277 30 1 4.2183 -0.8853 5.4671 31 1 6.4088 -3.6854 6.6839 32 1 6.6270 -1.9446 6.2119 33 1 9.7683 0.6074 8.4432 34 1 8.1390 -0.7123 6.7962 35 1 4.9353 -0.4542 7.6935 36 1 4.0069 -1.5692 8.7861 37 1 2.8363 1.0366 2.0628 There are 54 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 54 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_18339242_13287726.mol2 37 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 09:48:42 Heat of formation + Delta-G solvation = 68.170995 kcal Electronic energy + Delta-G solvation = -23215.177853 eV Core-core repulsion = 19542.804341 eV Total energy + Delta-G solvation = -3672.373512 eV No. of doubly occupied orbitals = 54 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 302.110 amu Computer time = 0.61 seconds Orbital eigenvalues (eV) -45.87035 -41.94806 -40.88876 -39.39206 -38.08904 -35.39873 -34.25946 -33.46514 -32.98464 -32.57009 -28.29201 -26.94241 -26.68906 -25.11072 -24.26202 -23.76716 -22.42634 -21.60501 -20.95130 -19.15547 -18.90722 -18.72811 -18.42567 -17.87266 -17.15804 -16.75024 -16.53573 -16.40986 -16.14791 -16.10603 -15.70848 -15.18615 -14.66139 -14.47715 -14.42215 -14.32723 -13.87508 -13.68637 -13.56322 -13.48410 -12.83160 -12.75208 -12.38410 -12.18761 -11.99740 -11.77367 -11.31774 -11.14155 -10.92762 -10.82420 -10.67849 -10.56383 -10.40085 -10.07713 -5.14424 -0.62299 0.00784 0.56678 1.04770 1.24305 1.40760 1.57949 1.80171 1.95543 2.33945 2.63951 2.87453 3.09705 3.13544 3.24593 3.37500 3.46749 3.57179 3.62260 3.69573 3.81296 3.86545 3.92513 4.08684 4.19624 4.30066 4.36800 4.48568 4.52476 4.56106 4.60722 4.66015 4.80257 4.83199 4.87203 4.91288 5.00988 5.14154 5.30346 5.44375 6.16591 6.28662 6.58232 7.09284 7.33361 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.525 6.525 2 C -0.074 4.074 3 Si 0.686 3.314 4 C -0.148 4.148 5 C -0.052 4.052 6 C -0.108 4.108 7 C 0.080 3.920 8 C 0.574 3.426 9 O -0.528 6.528 10 N -0.700 5.700 11 C 0.123 3.877 12 H 0.123 0.877 13 C -0.139 4.139 14 C -0.034 4.034 15 H 0.113 0.887 16 C 0.029 3.971 17 N -0.363 5.363 18 O 0.099 5.901 19 C -0.056 4.056 20 C -0.233 4.233 21 C -0.132 4.132 22 N -0.453 5.453 23 C 0.102 3.898 24 H 0.378 0.622 25 H 0.125 0.875 26 H -0.251 1.251 27 H -0.255 1.255 28 H 0.148 0.852 29 H 0.153 0.847 30 H 0.413 0.587 31 H 0.083 0.917 32 H 0.092 0.908 33 H 0.217 0.783 34 H 0.171 0.829 35 H 0.091 0.909 36 H 0.084 0.916 37 H 0.165 0.835 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.842 3.480 -3.477 5.681 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.332 6.332 2 C -0.184 4.184 3 Si 0.587 3.413 4 C -0.151 4.151 5 C -0.078 4.078 6 C -0.128 4.128 7 C -0.058 4.058 8 C 0.359 3.641 9 O -0.403 6.403 10 N -0.350 5.350 11 C 0.018 3.982 12 H 0.140 0.860 13 C -0.178 4.178 14 C -0.054 4.054 15 H 0.131 0.869 16 C -0.130 4.130 17 N -0.065 5.065 18 O 0.033 5.967 19 C -0.137 4.137 20 C -0.254 4.254 21 C -0.171 4.171 22 N -0.164 5.164 23 C -0.058 4.058 24 H 0.226 0.774 25 H 0.143 0.857 26 H -0.176 1.176 27 H -0.180 1.180 28 H 0.166 0.834 29 H 0.171 0.829 30 H 0.249 0.751 31 H 0.101 0.899 32 H 0.111 0.889 33 H 0.234 0.766 34 H 0.189 0.811 35 H 0.110 0.890 36 H 0.103 0.897 37 H 0.181 0.819 Dipole moment (debyes) X Y Z Total from point charges 2.588 3.275 -1.984 4.622 hybrid contribution -1.175 -0.018 -1.146 1.641 sum 1.413 3.257 -3.130 4.733 Atomic orbital electron populations 1.86644 1.17171 1.79967 1.49386 1.25018 0.84290 1.11353 0.97770 0.94999 0.91386 0.73988 0.80954 1.21586 0.99517 0.95763 0.98187 1.21574 0.95769 0.93760 0.96722 1.22237 0.95315 1.02324 0.92947 1.21170 0.98551 0.90301 0.95779 1.17891 0.77875 0.85969 0.82371 1.90821 1.57850 1.14853 1.76759 1.45783 1.55096 1.13944 1.20199 1.22543 0.94272 0.97752 0.83666 0.85961 1.23553 0.96484 1.03324 0.94476 1.20681 0.90461 0.96760 0.97454 0.86854 1.23378 0.99687 1.01271 0.88688 1.73880 1.01783 1.08554 1.22331 1.84872 1.34242 1.48001 1.29608 1.26095 1.01990 1.02241 0.83371 1.22710 0.97909 1.02555 1.02237 1.23397 0.96588 0.99234 0.97853 1.67523 1.18285 1.09438 1.21180 1.22681 0.94227 1.00023 0.88836 0.77421 0.85714 1.17567 1.17961 0.83449 0.82945 0.75053 0.89879 0.88907 0.76601 0.81127 0.89015 0.89732 0.81882 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.53 0.36 12.84 -35.23 -0.45 -0.09 16 2 C -0.07 0.18 2.82 36.01 0.10 0.28 16 3 Si 0.69 -2.05 29.90 -169.99 -5.08 -7.14 16 4 C -0.15 0.24 5.37 -104.36 -0.56 -0.32 16 5 C -0.05 0.05 9.83 -39.31 -0.39 -0.33 16 6 C -0.11 -0.04 9.63 -39.05 -0.38 -0.41 16 7 C 0.08 0.10 6.75 -83.01 -0.56 -0.46 16 8 C 0.57 1.28 7.81 -12.18 -0.10 1.18 16 9 O -0.53 -2.71 15.92 5.35 0.09 -2.62 16 10 N -0.70 0.12 5.34 -53.86 -0.29 -0.17 16 11 C 0.12 -0.09 4.24 -67.11 -0.28 -0.37 16 12 H 0.12 0.05 7.46 -51.93 -0.39 -0.34 16 13 C -0.14 0.20 7.27 -25.92 -0.19 0.01 16 14 C -0.03 0.02 4.29 -90.96 -0.39 -0.37 16 15 H 0.11 -0.06 8.14 -51.93 -0.42 -0.48 16 16 C 0.03 0.03 6.70 -82.10 -0.55 -0.52 16 17 N -0.36 -1.21 12.07 33.42 0.40 -0.81 16 18 O 0.10 0.18 11.20 17.18 0.19 0.38 16 19 C -0.06 0.08 12.30 29.74 0.37 0.45 16 20 C -0.23 0.23 10.27 -39.38 -0.40 -0.17 16 21 C -0.13 0.18 7.38 -25.92 -0.19 -0.01 16 22 N -0.45 -0.12 9.54 -9.80 -0.09 -0.21 16 23 C 0.10 -0.13 9.84 -17.56 -0.17 -0.31 16 24 H 0.38 -1.28 8.70 45.56 0.40 -0.89 16 25 H 0.13 -0.41 7.96 -51.93 -0.41 -0.82 16 26 H -0.25 -0.13 7.11 56.52 0.40 0.27 16 27 H -0.25 0.32 7.01 56.52 0.40 0.71 16 28 H 0.15 -0.35 8.06 -52.49 -0.42 -0.78 16 29 H 0.15 0.01 7.64 -52.49 -0.40 -0.39 16 30 H 0.41 -0.63 8.06 -40.82 -0.33 -0.96 16 31 H 0.08 -0.09 8.14 -51.93 -0.42 -0.51 16 32 H 0.09 -0.20 6.62 -51.93 -0.34 -0.55 16 33 H 0.22 -1.23 8.06 -52.48 -0.42 -1.65 16 34 H 0.17 -0.57 7.12 -52.48 -0.37 -0.94 16 35 H 0.09 -0.16 8.07 -51.93 -0.42 -0.58 16 36 H 0.08 -0.11 8.14 -51.93 -0.42 -0.54 16 37 H 0.16 -0.57 4.86 -52.49 -0.25 -0.82 16 LS Contribution 322.47 15.07 4.86 4.86 Total: 0.00 -8.51 322.47 -7.91 -16.42 By element: Atomic # 1 Polarization: -5.41 SS G_CDS: -3.84 Total: -9.26 kcal Atomic # 6 Polarization: 2.33 SS G_CDS: -3.69 Total: -1.36 kcal Atomic # 7 Polarization: -1.22 SS G_CDS: 0.02 Total: -1.19 kcal Atomic # 8 Polarization: -2.16 SS G_CDS: -0.17 Total: -2.33 kcal Atomic # 14 Polarization: -2.05 SS G_CDS: -5.08 Total: -7.14 kcal Total LS contribution 4.86 Total: 4.86 kcal Total: -8.51 -7.91 -16.42 kcal The number of atoms in the molecule is 37 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_18339242_13287726.mol2 37 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 84.594 kcal (2) G-P(sol) polarization free energy of solvation -8.511 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 76.083 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.912 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -16.423 kcal (6) G-S(sol) free energy of system = (1) + (5) 68.171 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.61 seconds