Wall clock time and date at job start Sun Mar 7 2021 09:48:41 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42901 * 1 3 3 Si 1.86300 * 109.47072 * 2 1 4 4 C 1.50699 * 109.47057 * 120.00135 * 2 1 3 5 5 C 1.38581 * 120.32170 * 64.72188 * 4 2 1 6 6 C 1.38637 * 118.48554 * 180.25099 * 5 4 2 7 7 C 1.39266 * 119.06238 * 0.04323 * 6 5 4 8 8 C 1.48164 * 119.72594 * 179.97438 * 7 6 5 9 9 O 1.21515 * 119.99713 * 359.97438 * 8 7 6 10 10 N 1.34778 * 120.00155 * 179.97438 * 8 7 6 11 11 C 1.46505 * 119.99703 * 180.02562 * 10 8 7 12 12 H 1.08993 * 112.85004 * 336.19118 * 11 10 8 13 13 C 1.53783 * 113.61482 * 107.50448 * 11 10 8 14 14 C 1.53782 * 87.08237 * 139.97747 * 13 11 10 15 15 H 1.08997 * 113.61274 * 89.11447 * 14 13 11 16 16 C 1.50694 * 113.61202 * 220.01868 * 14 13 11 17 17 N 1.30180 * 126.80125 * 192.52057 * 16 14 13 18 18 O 1.20926 * 111.60418 * 179.97438 * 17 16 14 19 19 C 1.34038 * 111.56693 * 359.97438 * 18 17 16 20 20 C 1.35449 * 106.44591 * 359.75066 * 19 18 17 21 21 C 1.53779 * 87.07900 * 334.56609 * 14 13 11 22 22 N 1.32747 * 120.55287 * 359.95519 * 7 6 5 23 23 C 1.31491 * 121.64663 * 0.02562 * 22 7 6 24 24 H 0.96699 * 113.99948 * 299.99908 * 1 2 3 25 25 H 1.09004 * 109.46942 * 240.00044 * 2 1 3 26 26 H 1.48499 * 109.99891 * 300.00012 * 3 2 1 27 27 H 1.48497 * 109.99800 * 61.32124 * 3 2 1 28 28 H 1.07998 * 120.76266 * 0.25543 * 5 4 2 29 29 H 1.07996 * 120.46915 * 180.02562 * 6 5 4 30 30 H 0.96995 * 120.00493 * 359.97438 * 10 8 7 31 31 H 1.08999 * 113.61128 * 254.52622 * 13 11 10 32 32 H 1.08994 * 113.61258 * 25.42444 * 13 11 10 33 33 H 1.08004 * 126.77548 * 180.02562 * 19 18 17 34 34 H 1.08003 * 128.00466 * 180.23008 * 20 19 18 35 35 H 1.09006 * 113.61472 * 270.88199 * 21 14 13 36 36 H 1.08999 * 113.68913 * 139.99360 * 21 14 13 37 37 H 1.07999 * 119.55542 * 179.97438 * 23 22 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9313 -0.7104 1.2304 5 6 1.6829 -2.0622 1.4083 6 6 2.1581 -2.6763 2.5568 7 6 2.8639 -1.9174 3.4871 8 6 3.3779 -2.5587 4.7200 9 8 3.1826 -3.7419 4.9161 10 7 4.0621 -1.8296 5.6238 11 6 4.5707 -2.4639 6.8426 12 1 4.0167 -3.3621 7.1152 13 6 6.0968 -2.6539 6.8473 14 6 6.0639 -2.2477 8.3301 15 1 5.9193 -3.0876 9.0097 16 6 7.2072 -1.3542 8.7367 17 7 7.5610 -1.0440 9.9505 18 8 8.5190 -0.3061 9.9602 19 6 8.9363 -0.0241 8.7180 20 6 8.1124 -0.6922 7.8757 21 6 4.7682 -1.4836 8.0108 22 7 3.0803 -0.6244 3.2785 23 6 2.6413 -0.0170 2.1980 24 1 -0.3933 0.4417 0.7651 25 1 1.7923 -0.5138 -0.8900 26 1 1.5615 2.4679 -1.2085 27 1 1.5879 2.4585 1.2242 28 1 1.1318 -2.6244 0.6690 29 1 1.9832 -3.7282 2.7277 30 1 4.2183 -0.8853 5.4671 31 1 6.4088 -3.6854 6.6839 32 1 6.6270 -1.9446 6.2119 33 1 9.7683 0.6074 8.4432 34 1 8.1390 -0.7123 6.7962 35 1 4.9353 -0.4542 7.6935 36 1 4.0069 -1.5692 8.7861 37 1 2.8363 1.0366 2.0628 There are 54 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 54 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_18339242_13287726.mol2 37 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 09:48:41 Heat of formation + Delta-G solvation = 67.149663 kcal Electronic energy + Delta-G solvation = -23215.222142 eV Core-core repulsion = 19542.804341 eV Total energy + Delta-G solvation = -3672.417800 eV No. of doubly occupied orbitals = 54 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 302.110 amu Computer time = 0.85 seconds Orbital eigenvalues (eV) -45.87753 -41.94243 -40.87218 -39.45108 -37.99643 -35.44281 -34.23348 -33.43715 -32.93036 -32.54704 -28.25071 -26.86481 -26.65017 -25.03886 -24.22583 -23.71364 -22.38608 -21.63872 -20.90499 -19.15236 -18.85530 -18.64895 -18.46173 -17.83959 -17.13228 -16.66027 -16.51051 -16.33849 -16.15655 -16.08875 -15.64745 -15.17771 -14.60669 -14.41037 -14.33676 -14.25748 -13.84539 -13.64665 -13.48896 -13.39644 -12.83066 -12.62869 -12.39224 -12.14107 -11.94687 -11.75702 -11.41072 -11.07293 -10.87703 -10.68711 -10.65577 -10.54456 -10.39699 -10.08776 -4.91926 -0.60332 0.08225 0.63763 1.24990 1.29441 1.52272 1.59879 1.93117 1.97888 2.49299 2.65115 2.92109 3.15936 3.30470 3.34178 3.50476 3.53034 3.63632 3.70912 3.78926 3.87952 3.93080 4.00706 4.13472 4.31393 4.46906 4.48148 4.57434 4.60999 4.66091 4.73906 4.75661 4.88394 4.89212 4.95454 4.99691 5.12726 5.18925 5.37947 5.45781 6.26813 6.42369 6.61200 7.02696 7.37104 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.544 6.544 2 C -0.079 4.079 3 Si 0.768 3.232 4 C -0.139 4.139 5 C -0.053 4.053 6 C -0.116 4.116 7 C 0.064 3.936 8 C 0.570 3.430 9 O -0.566 6.566 10 N -0.687 5.687 11 C 0.120 3.880 12 H 0.108 0.892 13 C -0.128 4.128 14 C -0.036 4.036 15 H 0.107 0.893 16 C 0.020 3.980 17 N -0.406 5.406 18 O 0.079 5.921 19 C -0.046 4.046 20 C -0.240 4.240 21 C -0.121 4.121 22 N -0.458 5.458 23 C 0.100 3.900 24 H 0.388 0.612 25 H 0.137 0.863 26 H -0.301 1.301 27 H -0.274 1.274 28 H 0.161 0.839 29 H 0.148 0.852 30 H 0.421 0.579 31 H 0.079 0.921 32 H 0.106 0.894 33 H 0.257 0.743 34 H 0.195 0.805 35 H 0.100 0.900 36 H 0.083 0.917 37 H 0.186 0.814 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.543 4.672 -4.590 7.446 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.352 6.352 2 C -0.188 4.188 3 Si 0.672 3.328 4 C -0.142 4.142 5 C -0.078 4.078 6 C -0.137 4.137 7 C -0.074 4.074 8 C 0.356 3.644 9 O -0.444 6.444 10 N -0.337 5.337 11 C 0.015 3.985 12 H 0.126 0.874 13 C -0.167 4.167 14 C -0.056 4.056 15 H 0.125 0.875 16 C -0.139 4.139 17 N -0.112 5.112 18 O 0.015 5.985 19 C -0.127 4.127 20 C -0.261 4.261 21 C -0.160 4.160 22 N -0.170 5.170 23 C -0.060 4.060 24 H 0.238 0.762 25 H 0.154 0.846 26 H -0.229 1.229 27 H -0.200 1.200 28 H 0.178 0.822 29 H 0.166 0.834 30 H 0.259 0.741 31 H 0.098 0.902 32 H 0.124 0.876 33 H 0.273 0.727 34 H 0.212 0.788 35 H 0.118 0.882 36 H 0.101 0.899 37 H 0.202 0.798 Dipole moment (debyes) X Y Z Total from point charges 3.319 4.481 -3.067 6.364 hybrid contribution -1.412 -0.318 -0.871 1.689 sum 1.908 4.163 -3.938 6.039 Atomic orbital electron populations 1.86621 1.18006 1.80366 1.50245 1.25223 0.83685 1.12078 0.97841 0.94080 0.90020 0.71598 0.77106 1.21672 0.98792 0.95474 0.98226 1.21746 0.95498 0.94187 0.96409 1.22288 0.95636 1.02289 0.93465 1.21075 0.99616 0.90915 0.95745 1.18126 0.77709 0.85637 0.82922 1.90793 1.59536 1.16416 1.77701 1.45737 1.54081 1.14167 1.19740 1.22512 0.94691 0.97534 0.83729 0.87392 1.23502 0.95720 1.03473 0.94022 1.20685 0.90545 0.96605 0.97763 0.87522 1.23738 1.00128 1.01227 0.88762 1.73876 1.03197 1.10312 1.23817 1.84814 1.34208 1.48163 1.31284 1.26900 1.02240 1.01550 0.82024 1.23050 0.97418 1.02322 1.03320 1.23336 0.96064 0.99354 0.97291 1.67512 1.18641 1.08925 1.21878 1.23057 0.93716 1.00906 0.88292 0.76245 0.84568 1.22853 1.20022 0.82171 0.83393 0.74099 0.90235 0.87560 0.72730 0.78811 0.88177 0.89881 0.79774 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 1.22 12.84 -148.98 -1.91 -0.69 16 2 C -0.08 0.47 2.82 71.24 0.20 0.67 16 3 Si 0.77 -5.35 29.90 68.60 2.05 -3.30 16 4 C -0.14 0.60 5.37 -19.70 -0.11 0.49 16 5 C -0.05 0.13 9.83 22.45 0.22 0.35 16 6 C -0.12 -0.15 9.63 22.61 0.22 0.07 16 7 C 0.06 0.18 6.75 41.89 0.28 0.47 16 8 C 0.57 3.14 7.81 86.88 0.68 3.82 16 9 O -0.57 -6.87 15.92 -3.76 -0.06 -6.93 16 10 N -0.69 -0.06 5.34 -442.60 -2.37 -2.42 16 11 C 0.12 -0.08 4.24 45.52 0.19 0.12 16 12 H 0.11 0.28 7.46 -2.39 -0.02 0.27 16 13 C -0.13 0.34 7.27 31.12 0.23 0.56 16 14 C -0.04 0.02 4.29 -11.02 -0.05 -0.03 16 15 H 0.11 0.06 8.14 -2.39 -0.02 0.04 16 16 C 0.02 0.05 6.70 43.57 0.29 0.34 16 17 N -0.41 -3.14 12.07 -49.54 -0.60 -3.74 16 18 O 0.08 0.33 11.20 71.65 0.80 1.13 16 19 C -0.05 0.19 12.30 67.18 0.83 1.02 16 20 C -0.24 0.72 10.27 22.40 0.23 0.95 16 21 C -0.12 0.28 7.38 31.12 0.23 0.51 16 22 N -0.46 -0.02 9.54 -184.92 -1.76 -1.78 16 23 C 0.10 -0.38 9.84 84.83 0.83 0.45 16 24 H 0.39 -2.93 8.70 -74.06 -0.64 -3.58 16 25 H 0.14 -1.10 7.96 -2.38 -0.02 -1.12 16 26 H -0.30 -0.46 7.11 99.48 0.71 0.25 16 27 H -0.27 1.02 7.01 99.48 0.70 1.72 16 28 H 0.16 -0.88 8.06 -2.91 -0.02 -0.90 16 29 H 0.15 0.24 7.64 -2.91 -0.02 0.22 16 30 H 0.42 -1.39 8.06 -92.71 -0.75 -2.14 16 31 H 0.08 -0.12 8.14 -2.39 -0.02 -0.14 16 32 H 0.11 -0.57 6.62 -2.39 -0.02 -0.58 16 33 H 0.26 -3.53 8.06 -2.91 -0.02 -3.55 16 34 H 0.19 -1.68 7.12 -2.91 -0.02 -1.70 16 35 H 0.10 -0.38 8.07 -2.38 -0.02 -0.40 16 36 H 0.08 -0.15 8.14 -2.39 -0.02 -0.17 16 37 H 0.19 -1.62 4.86 -2.91 -0.01 -1.64 16 Total: 0.00 -21.59 322.47 0.21 -21.37 By element: Atomic # 1 Polarization: -13.21 SS G_CDS: -0.22 Total: -13.43 kcal Atomic # 6 Polarization: 5.51 SS G_CDS: 4.28 Total: 9.79 kcal Atomic # 7 Polarization: -3.22 SS G_CDS: -4.73 Total: -7.94 kcal Atomic # 8 Polarization: -5.32 SS G_CDS: -1.17 Total: -6.49 kcal Atomic # 14 Polarization: -5.35 SS G_CDS: 2.05 Total: -3.30 kcal Total: -21.59 0.21 -21.37 kcal The number of atoms in the molecule is 37 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_18339242_13287726.mol2 37 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 88.524 kcal (2) G-P(sol) polarization free energy of solvation -21.586 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 66.938 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.212 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.375 kcal (6) G-S(sol) free energy of system = (1) + (5) 67.150 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.85 seconds