Wall clock time and date at job start Sun Mar 7 2021 09:48:51 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42903 * 1 3 3 Si 1.86299 * 109.47017 * 2 1 4 4 C 1.50699 * 109.47591 * 120.00480 * 2 1 3 5 5 C 1.34852 * 125.89948 * 218.19922 * 4 2 1 6 6 C 1.40941 * 107.46479 * 179.97438 * 5 4 2 7 7 C 1.34851 * 107.46805 * 359.75896 * 6 5 4 8 8 N 1.36566 * 108.20238 * 0.38827 * 7 6 5 9 9 C 1.40192 * 125.67056 * 179.86412 * 8 7 6 10 10 C 1.38836 * 120.06448 * 56.07556 * 9 8 7 11 11 C 1.38120 * 119.93447 * 179.97438 * 10 9 8 12 12 C 1.38278 * 120.06416 * 359.97438 * 11 10 9 13 13 C 1.50698 * 119.93064 * 179.97438 * 12 11 10 14 14 C 1.50700 * 109.46955 * 90.00514 * 13 12 11 15 15 O 1.21282 * 119.99911 * 359.97438 * 14 13 12 16 16 N 1.34773 * 120.00098 * 179.97438 * 14 13 12 17 17 C 1.46505 * 120.00169 * 179.97438 * 16 14 13 18 18 H 1.09002 * 112.84650 * 23.80614 * 17 16 14 19 19 C 1.53779 * 113.61593 * 154.99987 * 17 16 14 20 20 C 1.53782 * 87.08078 * 139.98316 * 19 17 16 21 21 H 1.08989 * 113.61787 * 89.11816 * 20 19 17 22 22 C 1.50709 * 113.61247 * 219.93831 * 20 19 17 23 23 N 1.30176 * 126.79795 * 265.02272 * 22 20 19 24 24 O 1.20922 * 111.60415 * 179.97438 * 23 22 20 25 25 C 1.34043 * 111.56600 * 359.97438 * 24 23 22 26 26 C 1.35454 * 106.44428 * 359.75030 * 25 24 23 27 27 C 1.53784 * 87.08146 * 334.56538 * 20 19 17 28 28 C 1.38273 * 120.13460 * 0.27704 * 12 11 10 29 29 C 1.38129 * 120.06438 * 359.44789 * 28 12 11 30 30 H 0.96701 * 113.99195 * 305.21940 * 1 2 3 31 31 H 1.09001 * 109.46720 * 240.00503 * 2 1 3 32 32 H 1.48499 * 110.00280 * 300.00107 * 3 2 1 33 33 H 1.48497 * 109.99934 * 61.32646 * 3 2 1 34 34 H 1.08002 * 126.26471 * 359.97438 * 5 4 2 35 35 H 1.07994 * 126.26063 * 180.02562 * 6 5 4 36 36 H 1.08004 * 125.89477 * 180.23394 * 7 6 5 37 37 H 1.07997 * 120.03060 * 359.95874 * 10 9 8 38 38 H 1.07997 * 119.96652 * 180.02562 * 11 10 9 39 39 H 1.09007 * 109.47309 * 209.99975 * 13 12 11 40 40 H 1.08994 * 109.47712 * 330.00434 * 13 12 11 41 41 H 0.97002 * 120.00465 * 0.02562 * 16 14 13 42 42 H 1.08999 * 113.61527 * 254.52980 * 19 17 16 43 43 H 1.09004 * 113.61494 * 25.43788 * 19 17 16 44 44 H 1.07992 * 126.77783 * 180.02562 * 25 24 23 45 45 H 1.08003 * 128.00512 * 180.22887 * 26 25 24 46 46 H 1.08996 * 113.61509 * 270.88467 * 27 20 19 47 47 H 1.08995 * 113.61342 * 139.98144 * 27 20 19 48 48 H 1.07997 * 119.97149 * 179.70329 * 28 12 11 49 49 H 1.07995 * 120.03192 * 180.27150 * 29 28 12 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9315 -0.7105 1.2304 5 6 3.0044 -0.3552 1.9659 6 6 3.1197 -1.2823 3.0212 7 6 2.1098 -2.1669 2.8949 8 7 1.3785 -1.8251 1.7933 9 6 0.2450 -2.5023 1.3222 10 6 -0.8460 -2.6979 2.1584 11 6 -1.9615 -3.3650 1.6912 12 6 -1.9927 -3.8374 0.3920 13 6 -3.2112 -4.5653 -0.1143 14 6 -4.1732 -3.5748 -0.7182 15 8 -3.8967 -2.3941 -0.7353 16 7 -5.3407 -4.0012 -1.2393 17 6 -6.2761 -3.0382 -1.8259 18 1 -5.7876 -2.1224 -2.1586 19 6 -7.2142 -3.6531 -2.8779 20 6 -8.3296 -2.7800 -2.2792 21 1 -8.4036 -1.7928 -2.7352 22 6 -9.6599 -3.4817 -2.1835 23 7 -10.6312 -3.4330 -3.0488 24 8 -11.5750 -4.1020 -2.6969 25 6 -11.3443 -4.6982 -1.5187 26 6 -10.0974 -4.3289 -1.1397 27 6 -7.5280 -2.7939 -0.9668 28 6 -0.9057 -3.6486 -0.4415 29 6 0.2105 -2.9773 0.0182 30 1 -0.3932 0.5095 0.7217 31 1 1.7923 -0.5138 -0.8901 32 1 1.5615 2.4679 -1.2085 33 1 1.5880 2.4585 1.2243 34 1 3.6561 0.4859 1.7802 35 1 3.8756 -1.2815 3.7924 36 1 1.9147 -3.0030 3.5502 37 1 -0.8222 -2.3290 3.1731 38 1 -2.8106 -3.5171 2.3411 39 1 -2.9128 -5.2901 -0.8719 40 1 -3.6952 -5.0834 0.7135 41 1 -5.5620 -4.9455 -1.2254 42 1 -6.9547 -3.3878 -3.9027 43 1 -7.3781 -4.7225 -2.7450 44 1 -12.0177 -5.3486 -0.9804 45 1 -9.5625 -4.6135 -0.2457 46 1 -7.7776 -3.6283 -0.3116 47 1 -7.5217 -1.8348 -0.4489 48 1 -0.9310 -4.0229 -1.4542 49 1 1.0574 -2.8264 -0.6346 There are 69 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 69 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_18339242_13287746.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 09:48:51 Heat of formation + Delta-G solvation = 113.694321 kcal Electronic energy + Delta-G solvation = -33324.862519 eV Core-core repulsion = 28803.171768 eV Total energy + Delta-G solvation = -4521.690751 eV No. of doubly occupied orbitals = 69 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 380.157 amu Computer time = 1.42 seconds Orbital eigenvalues (eV) -45.90809 -42.67645 -41.34199 -40.19242 -39.19229 -37.88067 -35.33557 -34.85762 -33.87071 -32.59127 -32.16968 -31.74127 -31.06118 -28.21924 -26.87137 -26.56030 -26.06573 -24.10772 -23.98057 -23.45289 -22.21480 -21.50334 -21.40839 -20.76191 -20.59087 -19.31779 -18.82179 -18.50604 -18.05549 -17.64171 -17.42566 -17.07927 -16.67446 -16.40964 -16.13552 -15.90757 -15.81020 -15.62875 -15.31268 -14.97398 -14.70590 -14.53148 -14.40915 -14.33749 -14.17936 -13.93182 -13.85365 -13.70132 -13.43259 -13.38809 -13.20427 -12.99264 -12.84729 -12.56643 -12.38375 -12.35615 -12.12081 -11.95371 -11.89933 -11.75379 -11.02942 -10.94379 -10.87140 -10.57450 -10.23196 -10.07546 -10.01514 -9.23419 -9.08060 -4.94892 -0.00217 0.32581 0.61203 1.04653 1.26981 1.35896 1.62397 1.62590 1.80952 1.99824 2.10083 2.13442 2.47128 2.69934 3.13458 3.23735 3.30117 3.51942 3.60458 3.65159 3.67334 3.74811 3.85412 3.86565 3.97059 4.04132 4.14433 4.23600 4.28689 4.30494 4.44705 4.46721 4.52637 4.52839 4.58506 4.62068 4.64159 4.64327 4.72293 4.74897 4.83748 4.88848 4.93755 4.94620 5.12920 5.18035 5.19984 5.20986 5.26986 5.35971 5.48102 5.52642 5.78152 5.93690 6.18657 6.34373 6.50135 6.56108 7.27571 7.34769 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.540 6.540 2 C -0.065 4.065 3 Si 0.805 3.195 4 C -0.028 4.028 5 C -0.193 4.193 6 C -0.200 4.200 7 C -0.019 4.019 8 N -0.399 5.399 9 C 0.116 3.884 10 C -0.126 4.126 11 C -0.096 4.096 12 C -0.067 4.067 13 C -0.098 4.098 14 C 0.513 3.487 15 O -0.578 6.578 16 N -0.707 5.707 17 C 0.125 3.875 18 H 0.094 0.906 19 C -0.120 4.120 20 C -0.040 4.040 21 H 0.099 0.901 22 C 0.019 3.981 23 N -0.407 5.407 24 O 0.078 5.922 25 C -0.047 4.047 26 C -0.238 4.238 27 C -0.128 4.128 28 C -0.099 4.099 29 C -0.109 4.109 30 H 0.377 0.623 31 H 0.118 0.882 32 H -0.297 1.297 33 H -0.289 1.289 34 H 0.168 0.832 35 H 0.158 0.842 36 H 0.177 0.823 37 H 0.130 0.870 38 H 0.146 0.854 39 H 0.132 0.868 40 H 0.137 0.863 41 H 0.419 0.581 42 H 0.077 0.923 43 H 0.105 0.895 44 H 0.257 0.743 45 H 0.197 0.803 46 H 0.111 0.889 47 H 0.070 0.930 48 H 0.139 0.861 49 H 0.119 0.881 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.463 -7.893 3.696 8.728 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.346 6.346 2 C -0.173 4.173 3 Si 0.708 3.292 4 C -0.137 4.137 5 C -0.217 4.217 6 C -0.224 4.224 7 C -0.146 4.146 8 N -0.072 5.072 9 C 0.027 3.973 10 C -0.145 4.145 11 C -0.115 4.115 12 C -0.067 4.067 13 C -0.137 4.137 14 C 0.301 3.699 15 O -0.457 6.457 16 N -0.359 5.359 17 C 0.020 3.980 18 H 0.112 0.888 19 C -0.159 4.159 20 C -0.060 4.060 21 H 0.117 0.883 22 C -0.139 4.139 23 N -0.113 5.113 24 O 0.015 5.985 25 C -0.128 4.128 26 C -0.259 4.259 27 C -0.167 4.167 28 C -0.118 4.118 29 C -0.128 4.128 30 H 0.224 0.776 31 H 0.136 0.864 32 H -0.225 1.225 33 H -0.216 1.216 34 H 0.186 0.814 35 H 0.176 0.824 36 H 0.194 0.806 37 H 0.148 0.852 38 H 0.164 0.836 39 H 0.150 0.850 40 H 0.155 0.845 41 H 0.257 0.743 42 H 0.096 0.904 43 H 0.124 0.876 44 H 0.273 0.727 45 H 0.214 0.786 46 H 0.129 0.871 47 H 0.088 0.912 48 H 0.157 0.843 49 H 0.137 0.863 Dipole moment (debyes) X Y Z Total from point charges -0.843 -6.155 1.864 6.486 hybrid contribution -0.984 -0.516 1.133 1.587 sum -1.827 -6.671 2.997 7.538 Atomic orbital electron populations 1.86649 1.18399 1.74963 1.54620 1.25064 0.83477 1.12332 0.96421 0.93549 0.89816 0.69601 0.76214 1.21241 0.99451 0.92242 1.00765 1.21043 0.99445 1.03587 0.97634 1.21229 1.01406 0.97630 1.02150 1.22370 0.95752 1.03861 0.92635 1.41574 1.21455 1.21538 1.22659 1.17762 0.86982 0.98122 0.94461 1.21152 0.92375 1.00774 1.00225 1.21097 0.97598 0.96899 0.95861 1.19587 0.94932 0.98508 0.93716 1.20776 0.91880 0.96897 1.04127 1.21059 0.82206 0.89397 0.77264 1.90774 1.76710 1.20021 1.58216 1.45831 1.18196 1.11683 1.60166 1.22254 0.87895 0.93619 0.94258 0.88752 1.23329 0.92725 1.00730 0.99101 1.20699 0.86602 0.98773 0.99938 0.88315 1.23754 0.97111 1.00361 0.92706 1.73881 0.97954 1.14788 1.24698 1.84818 1.34054 1.46296 1.33371 1.26915 0.99145 0.99571 0.87136 1.23046 0.97020 1.02790 1.03081 1.23497 0.93650 1.03841 0.95725 1.21074 0.92460 0.98192 1.00042 1.20992 0.99435 0.97928 0.94420 0.77565 0.86417 1.22454 1.21562 0.81431 0.82449 0.80560 0.85166 0.83618 0.84986 0.84517 0.74280 0.90420 0.87629 0.72735 0.78587 0.87106 0.91152 0.84301 0.86301 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 -4.74 11.00 -148.98 -1.64 -6.38 16 2 C -0.07 -0.29 2.49 71.24 0.18 -0.11 16 3 Si 0.81 1.03 30.80 68.60 2.11 3.14 16 4 C -0.03 -0.16 6.12 41.04 0.25 0.09 16 5 C -0.19 -0.70 9.39 22.15 0.21 -0.49 16 6 C -0.20 -0.74 10.86 22.15 0.24 -0.50 16 7 C -0.02 -0.09 11.21 83.18 0.93 0.85 16 8 N -0.40 -2.71 2.84 -333.41 -0.95 -3.65 16 9 C 0.12 0.78 4.67 38.09 0.18 0.95 16 10 C -0.13 -0.55 9.77 22.38 0.22 -0.34 16 11 C -0.10 -0.16 9.69 22.25 0.22 0.05 16 12 C -0.07 -0.06 4.37 -19.85 -0.09 -0.15 16 13 C -0.10 0.61 5.83 29.10 0.17 0.78 16 14 C 0.51 0.09 7.82 87.66 0.69 0.78 16 15 O -0.58 -6.63 15.63 -3.04 -0.05 -6.68 16 16 N -0.71 3.86 5.35 -440.02 -2.36 1.50 16 17 C 0.13 -0.28 4.24 45.52 0.19 -0.09 16 18 H 0.09 0.33 7.46 -2.39 -0.02 0.31 16 19 C -0.12 0.45 7.38 31.12 0.23 0.68 16 20 C -0.04 0.03 4.29 -11.01 -0.05 -0.02 16 21 H 0.10 0.16 8.14 -2.39 -0.02 0.14 16 22 C 0.02 0.04 6.70 43.58 0.29 0.33 16 23 N -0.41 -3.04 12.07 -49.55 -0.60 -3.64 16 24 O 0.08 0.30 11.20 71.60 0.80 1.10 16 25 C -0.05 0.22 12.30 67.18 0.83 1.05 16 26 C -0.24 0.97 10.28 22.40 0.23 1.20 16 27 C -0.13 0.45 7.28 31.12 0.23 0.68 16 28 C -0.10 -0.33 9.69 22.25 0.22 -0.12 16 29 C -0.11 -0.68 8.61 22.38 0.19 -0.49 16 30 H 0.38 2.12 8.60 -74.06 -0.64 1.48 16 31 H 0.12 0.36 7.96 -2.39 -0.02 0.34 16 32 H -0.30 -2.34 7.11 99.48 0.71 -1.64 16 33 H -0.29 -1.88 7.11 99.48 0.71 -1.17 16 34 H 0.17 -0.32 6.59 -2.91 -0.02 -0.34 16 35 H 0.16 -0.05 8.06 -2.91 -0.02 -0.08 16 36 H 0.18 0.06 8.06 -2.91 -0.02 0.04 16 37 H 0.13 0.34 8.06 -2.91 -0.02 0.32 16 38 H 0.15 -0.43 8.06 -2.91 -0.02 -0.45 16 39 H 0.13 -1.48 8.08 -2.38 -0.02 -1.50 16 40 H 0.14 -1.68 8.08 -2.39 -0.02 -1.70 16 41 H 0.42 -5.23 8.73 -92.71 -0.81 -6.04 16 42 H 0.08 -0.18 8.14 -2.39 -0.02 -0.20 16 43 H 0.11 -0.70 8.07 -2.38 -0.02 -0.72 16 44 H 0.26 -3.71 8.06 -2.91 -0.02 -3.73 16 45 H 0.20 -2.04 7.13 -2.91 -0.02 -2.06 16 46 H 0.11 -0.84 6.63 -2.39 -0.02 -0.86 16 47 H 0.07 -0.07 8.14 -2.39 -0.02 -0.09 16 48 H 0.14 -0.03 8.06 -2.91 -0.02 -0.05 16 49 H 0.12 0.74 8.06 -2.91 -0.02 0.71 16 Total: 0.00 -29.22 414.27 2.47 -26.75 By element: Atomic # 1 Polarization: -16.88 SS G_CDS: -0.41 Total: -17.28 kcal Atomic # 6 Polarization: -0.41 SS G_CDS: 5.55 Total: 5.14 kcal Atomic # 7 Polarization: -1.88 SS G_CDS: -3.90 Total: -5.78 kcal Atomic # 8 Polarization: -11.07 SS G_CDS: -0.88 Total: -11.96 kcal Atomic # 14 Polarization: 1.03 SS G_CDS: 2.11 Total: 3.14 kcal Total: -29.22 2.47 -26.75 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_18339242_13287746.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 140.441 kcal (2) G-P(sol) polarization free energy of solvation -29.218 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 111.223 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 2.471 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -26.747 kcal (6) G-S(sol) free energy of system = (1) + (5) 113.694 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.42 seconds