Wall clock time and date at job start Sun Mar 7 2021 09:49:23 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42900 * 1 3 3 Si 1.86294 * 109.47475 * 2 1 4 4 C 1.50700 * 109.46627 * 239.99727 * 2 1 3 5 5 C 1.32691 * 124.69011 * 300.32107 * 4 2 1 6 6 C 1.44501 * 113.10366 * 180.14864 * 5 4 2 7 7 C 1.47048 * 123.49844 * 179.80721 * 6 5 4 8 8 O 1.21654 * 120.00343 * 179.72481 * 7 6 5 9 9 N 1.34778 * 119.99320 * 359.72368 * 7 6 5 10 10 C 1.46504 * 119.99685 * 179.97438 * 9 7 6 11 11 H 1.08997 * 112.85081 * 336.19784 * 10 9 7 12 12 C 1.53784 * 113.61467 * 107.50439 * 10 9 7 13 13 C 1.53781 * 87.08222 * 139.98020 * 12 10 9 14 14 H 1.08995 * 113.68756 * 89.12845 * 13 12 10 15 15 C 1.50704 * 113.61258 * 220.01829 * 13 12 10 16 16 N 1.30175 * 126.79790 * 192.45173 * 15 13 12 17 17 O 1.20923 * 111.59718 * 180.02562 * 16 15 13 18 18 C 1.34035 * 111.57389 * 0.02562 * 17 16 15 19 19 C 1.35455 * 106.44342 * 359.97438 * 18 17 16 20 20 C 1.53781 * 113.61374 * 205.00118 * 10 9 7 21 21 C 1.36224 * 113.01598 * 359.53455 * 6 5 4 22 22 Cl 1.73601 * 124.60927 * 180.22769 * 21 6 5 23 23 S 1.70455 * 110.78850 * 0.24893 * 21 6 5 24 24 H 0.96709 * 114.00174 * 59.99633 * 1 2 3 25 25 H 1.08993 * 109.47085 * 120.00340 * 2 1 3 26 26 H 1.48509 * 109.99876 * 298.68035 * 3 2 1 27 27 H 1.48494 * 110.00161 * 60.00000 * 3 2 1 28 28 H 1.08001 * 123.45016 * 359.96111 * 5 4 2 29 29 H 0.96997 * 120.00283 * 0.02562 * 9 7 6 30 30 H 1.09000 * 113.61126 * 25.43129 * 12 10 9 31 31 H 1.08995 * 113.61342 * 254.53670 * 12 10 9 32 32 H 1.07999 * 126.77572 * 180.26208 * 18 17 16 33 33 H 1.08003 * 128.00222 * 179.97438 * 19 18 17 34 34 H 1.08999 * 113.61709 * 105.47542 * 20 10 9 35 35 H 1.08996 * 113.61453 * 334.56584 * 20 10 9 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0501 1.7564 0.0000 4 6 1.9312 -0.7105 -1.2305 5 6 1.6636 -1.9739 -1.5351 6 6 2.2762 -2.4009 -2.7722 7 6 2.1330 -3.7568 -3.3231 8 8 2.6732 -4.0466 -4.3739 9 7 1.4032 -4.6783 -2.6638 10 6 1.2599 -6.0289 -3.2129 11 1 1.4102 -6.0653 -4.2919 12 6 2.0560 -7.0950 -2.4418 13 6 0.8455 -8.0240 -2.6325 14 1 0.8821 -8.6078 -3.5522 15 6 0.5303 -8.8615 -1.4199 16 7 -0.2781 -9.8803 -1.3646 17 8 -0.3263 -10.3504 -0.2515 18 6 0.4665 -9.6842 0.5995 19 6 1.0532 -8.6956 -0.1169 20 6 -0.0130 -6.7529 -2.7435 21 6 2.9955 -1.4155 -3.3782 22 17 3.8493 -1.5985 -4.8787 23 16 2.9440 0.0214 -2.4628 24 1 -0.3934 0.4418 -0.7651 25 1 1.7923 -0.5139 0.8899 26 1 1.5880 2.4585 -1.2243 27 1 1.5616 2.4678 1.2084 28 1 1.0529 -2.6181 -0.9198 29 1 0.9722 -4.4470 -1.8262 30 1 2.2444 -6.8314 -1.4011 31 1 2.9519 -7.4326 -2.9628 32 1 0.6125 -9.8968 1.6483 33 1 1.7569 -7.9524 0.2277 34 1 -0.7874 -6.8146 -3.5081 35 1 -0.3902 -6.3959 -1.7853 There are 55 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 55 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_18339242_13431040.mol2 35 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 09:49:23 Heat of formation + Delta-G solvation = 59.558275 kcal Electronic energy + Delta-G solvation = -23963.346658 eV Core-core repulsion = 20085.378035 eV Total energy + Delta-G solvation = -3877.968623 eV No. of doubly occupied orbitals = 55 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 341.032 amu Computer time = 0.69 seconds Orbital eigenvalues (eV) -45.88334 -41.39383 -39.89751 -38.82112 -37.96482 -37.00750 -35.34249 -33.83065 -32.56287 -31.64882 -27.63907 -26.85334 -26.80934 -25.37055 -23.92512 -22.42395 -21.92937 -21.08310 -20.47184 -19.39438 -18.80522 -18.47421 -18.03621 -17.77433 -17.20613 -16.51342 -16.34039 -16.09100 -15.97810 -15.76577 -15.41823 -14.76719 -14.54610 -14.42561 -14.23563 -13.95165 -13.83112 -13.61527 -13.38736 -12.96726 -12.77432 -12.58839 -12.48091 -12.37480 -12.13659 -11.90373 -11.80548 -11.72815 -10.99973 -10.86630 -10.72866 -10.55030 -10.17696 -9.86567 -9.64630 -5.04728 -0.62226 -0.17844 0.49420 0.63388 0.72546 1.05668 1.19926 1.29637 1.54207 1.90742 2.13392 2.16237 2.49483 3.14374 3.25682 3.31504 3.48511 3.54373 3.66933 3.83613 3.89243 3.91118 4.02272 4.30862 4.38019 4.49557 4.55386 4.61983 4.66470 4.74375 4.76495 4.79607 4.90767 4.96780 4.98381 5.14056 5.19840 5.49591 6.41713 6.45713 7.13892 7.37019 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.535 6.535 2 C -0.026 4.026 3 Si 0.703 3.297 4 C -0.225 4.225 5 C -0.067 4.067 6 C -0.167 4.167 7 C 0.572 3.428 8 O -0.559 6.559 9 N -0.697 5.697 10 C 0.126 3.874 11 H 0.103 0.897 12 C -0.128 4.128 13 C -0.038 4.038 14 H 0.103 0.897 15 C 0.020 3.980 16 N -0.407 5.407 17 O 0.078 5.922 18 C -0.047 4.047 19 C -0.239 4.239 20 C -0.121 4.121 21 C -0.139 4.139 22 Cl 0.002 6.998 23 S 0.262 5.738 24 H 0.390 0.610 25 H 0.152 0.848 26 H -0.260 1.260 27 H -0.269 1.269 28 H 0.181 0.819 29 H 0.415 0.585 30 H 0.108 0.892 31 H 0.074 0.926 32 H 0.256 0.744 33 H 0.196 0.804 34 H 0.080 0.920 35 H 0.103 0.897 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.198 3.337 7.852 8.615 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.343 6.343 2 C -0.139 4.139 3 Si 0.605 3.395 4 C -0.343 4.343 5 C -0.096 4.096 6 C -0.186 4.186 7 C 0.358 3.642 8 O -0.439 6.439 9 N -0.349 5.349 10 C 0.021 3.979 11 H 0.121 0.879 12 C -0.167 4.167 13 C -0.058 4.058 14 H 0.121 0.879 15 C -0.138 4.138 16 N -0.113 5.113 17 O 0.015 5.985 18 C -0.128 4.128 19 C -0.260 4.260 20 C -0.159 4.159 21 C -0.286 4.286 22 Cl 0.031 6.969 23 S 0.527 5.473 24 H 0.240 0.760 25 H 0.169 0.831 26 H -0.186 1.186 27 H -0.194 1.194 28 H 0.198 0.802 29 H 0.253 0.747 30 H 0.127 0.873 31 H 0.093 0.907 32 H 0.272 0.728 33 H 0.213 0.787 34 H 0.099 0.901 35 H 0.121 0.879 Dipole moment (debyes) X Y Z Total from point charges 1.369 4.441 6.427 7.932 hybrid contribution -1.116 -1.150 -0.129 1.608 sum 0.253 3.291 6.298 7.111 Atomic orbital electron populations 1.86623 1.17376 1.80074 1.50247 1.24468 0.83568 1.09715 0.96140 0.94570 0.90728 0.74099 0.80129 1.24875 1.07295 0.99125 1.02969 1.21121 0.99222 0.95450 0.93786 1.20337 1.05026 0.94787 0.98480 1.17723 0.78581 0.84215 0.83695 1.90862 1.48267 1.80917 1.23841 1.45650 1.51851 1.10946 1.26408 1.22374 0.96599 0.79763 0.99150 0.87904 1.23506 0.96607 0.93975 1.02641 1.20692 0.98588 0.92971 0.93533 0.87904 1.23745 0.96633 0.95467 0.97963 1.73880 1.22088 1.13719 1.01629 1.84814 1.52500 1.47388 1.13813 1.26906 0.92748 0.93158 0.99985 1.23050 1.06812 1.04387 0.91763 1.23339 0.96407 0.92982 1.03222 1.25825 1.03773 1.02455 0.96551 1.98428 1.73897 1.97266 1.27326 1.83312 1.46176 1.07012 1.10760 0.76040 0.83098 1.18586 1.19441 0.80170 0.74668 0.87323 0.90691 0.72772 0.78680 0.90119 0.87863 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.53 2.72 12.84 -148.98 -1.91 0.81 16 2 C -0.03 0.20 2.95 71.24 0.21 0.41 16 3 Si 0.70 -4.50 30.91 68.60 2.12 -2.38 16 4 C -0.23 1.33 5.68 24.52 0.14 1.46 16 5 C -0.07 0.35 9.71 22.70 0.22 0.57 16 6 C -0.17 -0.21 5.98 -19.84 -0.12 -0.33 16 7 C 0.57 2.56 7.79 86.55 0.67 3.23 16 8 O -0.56 -7.05 14.51 -4.20 -0.06 -7.11 16 9 N -0.70 1.73 5.33 -443.64 -2.37 -0.63 16 10 C 0.13 -0.20 4.24 45.52 0.19 -0.01 16 11 H 0.10 0.30 7.46 -2.39 -0.02 0.28 16 12 C -0.13 0.41 7.27 31.12 0.23 0.64 16 13 C -0.04 0.03 4.29 -11.01 -0.05 -0.02 16 14 H 0.10 0.09 8.14 -2.39 -0.02 0.07 16 15 C 0.02 0.04 6.70 43.58 0.29 0.33 16 16 N -0.41 -3.05 12.07 -49.58 -0.60 -3.65 16 17 O 0.08 0.31 11.20 71.68 0.80 1.11 16 18 C -0.05 0.21 12.30 67.18 0.83 1.04 16 19 C -0.24 0.88 10.28 22.40 0.23 1.11 16 20 C -0.12 0.40 7.38 31.12 0.23 0.63 16 21 C -0.14 -0.41 6.87 67.35 0.46 0.05 16 22 Cl 0.00 0.01 27.20 -2.72 -0.07 -0.06 16 23 S 0.26 -0.85 20.17 -56.49 -1.14 -1.99 16 24 H 0.39 -3.83 8.70 -74.05 -0.64 -4.47 16 25 H 0.15 -1.68 7.96 -2.39 -0.02 -1.70 16 26 H -0.26 0.63 7.11 99.48 0.71 1.33 16 27 H -0.27 -0.09 7.11 99.48 0.71 0.62 16 28 H 0.18 -1.90 7.10 -2.91 -0.02 -1.92 16 29 H 0.42 -3.59 7.27 -92.71 -0.67 -4.26 16 30 H 0.11 -0.73 6.62 -2.39 -0.02 -0.74 16 31 H 0.07 -0.09 8.14 -2.39 -0.02 -0.11 16 32 H 0.26 -3.61 8.06 -2.91 -0.02 -3.64 16 33 H 0.20 -1.90 7.12 -2.91 -0.02 -1.92 16 34 H 0.08 -0.19 8.14 -2.39 -0.02 -0.21 16 35 H 0.10 -0.60 8.07 -2.39 -0.02 -0.62 16 Total: 0.00 -22.26 332.66 0.21 -22.05 By element: Atomic # 1 Polarization: -17.18 SS G_CDS: -0.10 Total: -17.28 kcal Atomic # 6 Polarization: 5.60 SS G_CDS: 3.54 Total: 9.14 kcal Atomic # 7 Polarization: -1.32 SS G_CDS: -2.96 Total: -4.29 kcal Atomic # 8 Polarization: -4.02 SS G_CDS: -1.17 Total: -5.19 kcal Atomic # 14 Polarization: -4.50 SS G_CDS: 2.12 Total: -2.38 kcal Atomic # 16 Polarization: -0.85 SS G_CDS: -1.14 Total: -1.99 kcal Atomic # 17 Polarization: 0.01 SS G_CDS: -0.07 Total: -0.06 kcal Total: -22.26 0.21 -22.05 kcal The number of atoms in the molecule is 35 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_18339242_13431040.mol2 35 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 81.612 kcal (2) G-P(sol) polarization free energy of solvation -22.262 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 59.350 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.208 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.053 kcal (6) G-S(sol) free energy of system = (1) + (5) 59.558 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.69 seconds