Wall clock time and date at job start Sun Mar 7 2021 09:49:27 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42901 * 1 3 3 Si 1.86305 * 109.47104 * 2 1 4 4 C 1.50698 * 109.47301 * 240.00187 * 2 1 3 5 5 C 1.34181 * 125.43404 * 300.00470 * 4 2 1 6 6 C 1.47022 * 105.95075 * 180.02562 * 5 4 2 7 7 C 1.47385 * 127.19104 * 180.02562 * 6 5 4 8 8 O 1.21612 * 119.99991 * 359.97438 * 7 6 5 9 9 N 1.34773 * 119.99564 * 179.97438 * 7 6 5 10 10 C 1.46508 * 119.99594 * 179.97438 * 9 7 6 11 11 H 1.09006 * 112.85122 * 336.19708 * 10 9 7 12 12 C 1.53779 * 113.69115 * 107.46541 * 10 9 7 13 13 C 1.53784 * 87.08045 * 139.99342 * 12 10 9 14 14 H 1.08994 * 113.61477 * 89.11454 * 13 12 10 15 15 C 1.50702 * 113.61439 * 220.02212 * 13 12 10 16 16 N 1.30176 * 126.80325 * 192.52232 * 15 13 12 17 17 O 1.20920 * 111.60476 * 179.97438 * 16 15 13 18 18 C 1.34045 * 111.56818 * 359.97438 * 17 16 15 19 19 C 1.35453 * 106.44257 * 359.75420 * 18 17 16 20 20 C 1.53779 * 113.61245 * 205.00346 * 10 9 7 21 21 C 1.36415 * 105.61719 * 0.25415 * 6 5 4 22 22 O 1.33653 * 108.39766 * 359.57876 * 21 6 5 23 23 H 0.96699 * 114.00354 * 59.99586 * 1 2 3 24 24 H 1.09001 * 109.47497 * 119.99815 * 2 1 3 25 25 H 1.48496 * 109.99771 * 298.68299 * 3 2 1 26 26 H 1.48503 * 109.99973 * 60.00206 * 3 2 1 27 27 H 1.07997 * 127.02659 * 0.02562 * 5 4 2 28 28 H 0.96996 * 120.00779 * 0.02562 * 9 7 6 29 29 H 1.09002 * 113.61557 * 25.44454 * 12 10 9 30 30 H 1.09004 * 113.61501 * 254.53874 * 12 10 9 31 31 H 1.07995 * 126.77708 * 180.02562 * 18 17 16 32 32 H 1.08005 * 128.00278 * 180.23450 * 19 18 17 33 33 H 1.08997 * 113.61646 * 105.38794 * 20 10 9 34 34 H 1.08998 * 113.69354 * 334.49102 * 20 10 9 35 35 H 1.08001 * 125.80465 * 179.74349 * 21 6 5 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9314 -0.7104 -1.2305 5 6 1.6753 -1.9881 -1.5501 6 6 2.3690 -2.2330 -2.8230 7 6 2.3976 -3.4882 -3.5950 8 8 1.8013 -4.4665 -3.1872 9 7 3.0844 -3.5516 -4.7528 10 6 3.1133 -4.7995 -5.5199 11 1 2.9222 -5.6790 -4.9049 12 6 2.2726 -4.7533 -6.8068 13 6 3.4084 -5.5390 -7.4833 14 1 3.2980 -6.6205 -7.4050 15 6 3.7072 -5.0798 -8.8872 16 7 4.4433 -5.6933 -9.7683 17 8 4.4974 -5.0792 -10.8086 18 6 3.7829 -3.9466 -10.7498 19 6 3.2378 -3.9009 -9.5107 20 6 4.3486 -4.9375 -6.4253 21 6 2.9851 -1.0572 -3.1376 22 8 2.7067 -0.1661 -2.1813 23 1 -0.3934 0.4417 -0.7650 24 1 1.7924 -0.5138 0.8900 25 1 1.5878 2.4585 -1.2242 26 1 1.5615 2.4679 1.2085 27 1 1.0810 -2.6927 -0.9874 28 1 3.5603 -2.7714 -5.0779 29 1 2.1396 -3.7476 -7.2056 30 1 1.3377 -5.3095 -6.7378 31 1 3.6618 -3.2169 -11.5368 32 1 2.5955 -3.1389 -9.0944 33 1 5.0896 -5.6425 -6.0485 34 1 4.7842 -3.9830 -6.7204 35 1 3.5922 -0.8763 -4.0123 There are 52 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 52 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_18339242_13456056.mol2 35 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 09:49:27 Heat of formation + Delta-G solvation = 47.657742 kcal Electronic energy + Delta-G solvation = -22039.777696 eV Core-core repulsion = 18397.022141 eV Total energy + Delta-G solvation = -3642.755555 eV No. of doubly occupied orbitals = 52 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 291.098 amu Computer time = 0.57 seconds Orbital eigenvalues (eV) -45.92033 -43.76574 -41.15526 -39.37707 -38.19818 -35.39468 -34.28458 -33.60135 -32.63744 -31.77643 -27.46531 -26.98637 -26.58906 -24.88939 -23.96658 -22.34708 -22.16240 -21.29072 -20.63176 -19.37514 -18.89131 -18.47811 -17.91328 -17.62274 -17.48082 -17.17655 -16.44410 -16.27208 -16.02612 -15.80541 -15.51910 -14.90600 -14.47343 -14.20483 -14.00012 -13.91250 -13.78555 -13.63385 -13.54884 -12.99153 -12.85131 -12.43061 -12.12508 -12.04237 -11.80924 -11.10326 -10.97965 -10.93812 -10.79491 -10.61609 -10.17545 -9.85331 -5.03975 0.17720 0.51795 0.84074 1.09231 1.19370 1.43065 1.66323 1.87982 1.98755 2.28398 2.29462 3.03050 3.08918 3.19170 3.32153 3.42284 3.51317 3.57673 3.76768 3.85572 3.88975 4.14035 4.23645 4.30488 4.34469 4.47920 4.51192 4.54543 4.58601 4.62768 4.73997 4.78347 4.83671 4.95744 5.09520 5.18046 5.40064 5.77394 6.18948 6.37368 7.14771 7.28712 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.519 6.519 2 C -0.036 4.036 3 Si 0.705 3.295 4 C -0.056 4.056 5 C -0.123 4.123 6 C -0.238 4.238 7 C 0.589 3.411 8 O -0.529 6.529 9 N -0.717 5.717 10 C 0.127 3.873 11 H 0.123 0.877 12 C -0.140 4.140 13 C -0.034 4.034 14 H 0.114 0.886 15 C 0.029 3.971 16 N -0.362 5.362 17 O 0.100 5.900 18 C -0.055 4.055 19 C -0.234 4.234 20 C -0.132 4.132 21 C 0.032 3.968 22 O -0.165 6.165 23 H 0.381 0.619 24 H 0.138 0.862 25 H -0.257 1.257 26 H -0.249 1.249 27 H 0.162 0.838 28 H 0.399 0.601 29 H 0.091 0.909 30 H 0.082 0.918 31 H 0.217 0.783 32 H 0.171 0.829 33 H 0.084 0.916 34 H 0.090 0.910 35 H 0.214 0.786 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.785 5.601 -2.315 6.669 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.326 6.326 2 C -0.145 4.145 3 Si 0.604 3.396 4 C -0.105 4.105 5 C -0.143 4.143 6 C -0.243 4.243 7 C 0.377 3.623 8 O -0.406 6.406 9 N -0.368 5.368 10 C 0.022 3.978 11 H 0.141 0.859 12 C -0.180 4.180 13 C -0.054 4.054 14 H 0.132 0.868 15 C -0.131 4.131 16 N -0.065 5.065 17 O 0.033 5.967 18 C -0.136 4.136 19 C -0.255 4.255 20 C -0.171 4.171 21 C -0.039 4.039 22 O -0.061 6.061 23 H 0.229 0.771 24 H 0.155 0.845 25 H -0.181 1.181 26 H -0.173 1.173 27 H 0.180 0.820 28 H 0.233 0.767 29 H 0.110 0.890 30 H 0.101 0.899 31 H 0.234 0.766 32 H 0.188 0.812 33 H 0.103 0.897 34 H 0.108 0.892 35 H 0.230 0.770 Dipole moment (debyes) X Y Z Total from point charges 3.002 4.554 -1.433 5.640 hybrid contribution -1.375 0.704 -0.853 1.765 sum 1.626 5.258 -2.286 5.960 Atomic orbital electron populations 1.86683 1.16578 1.80135 1.49209 1.24387 0.84041 1.12260 0.93807 0.94443 0.91253 0.72973 0.80929 1.22687 0.99904 0.94123 0.93745 1.22547 1.01138 0.95446 0.95133 1.21532 1.07724 0.95180 0.99827 1.17306 0.78393 0.86654 0.79940 1.90825 1.43719 1.36869 1.69157 1.45775 1.53325 1.14622 1.23122 1.22474 0.96144 0.88383 0.90785 0.85948 1.23563 0.98010 1.01222 0.95161 1.20687 0.97780 1.01019 0.85905 0.86838 1.23382 0.98119 0.93822 0.97728 1.73882 1.19820 1.19125 0.93638 1.84877 1.54322 1.27587 1.29886 1.26100 0.95822 0.91509 1.00209 1.22699 1.06852 1.00977 0.95006 1.23398 0.96848 1.02231 0.94622 1.24462 0.99491 0.87070 0.92851 1.83689 1.54557 1.39873 1.27998 0.77103 0.84462 1.18065 1.17330 0.82006 0.76663 0.89050 0.89910 0.76604 0.81191 0.89693 0.89153 0.77008 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.52 -0.13 12.86 -35.23 -0.45 -0.59 16 2 C -0.04 0.04 2.97 36.00 0.11 0.15 16 3 Si 0.71 -1.29 32.09 -169.99 -5.45 -6.75 16 4 C -0.06 0.01 6.20 -35.74 -0.22 -0.21 16 5 C -0.12 -0.18 10.88 -37.45 -0.41 -0.59 16 6 C -0.24 -0.14 6.31 -103.27 -0.65 -0.79 16 7 C 0.59 1.12 7.81 -12.54 -0.10 1.03 16 8 O -0.53 -3.32 16.58 5.27 0.09 -3.24 16 9 N -0.72 1.20 5.35 -54.10 -0.29 0.91 16 10 C 0.13 -0.17 4.24 -67.12 -0.28 -0.45 16 11 H 0.12 0.05 7.46 -51.93 -0.39 -0.34 16 12 C -0.14 0.26 7.27 -25.92 -0.19 0.07 16 13 C -0.03 0.03 4.29 -90.95 -0.39 -0.36 16 14 H 0.11 -0.09 8.14 -51.93 -0.42 -0.51 16 15 C 0.03 0.02 6.70 -82.10 -0.55 -0.53 16 16 N -0.36 -1.07 12.07 33.42 0.40 -0.67 16 17 O 0.10 0.15 11.20 17.16 0.19 0.34 16 18 C -0.05 0.11 12.30 29.74 0.37 0.47 16 19 C -0.23 0.35 10.27 -39.38 -0.40 -0.05 16 20 C -0.13 0.29 7.38 -25.92 -0.19 0.10 16 21 C 0.03 -0.08 11.61 30.08 0.35 0.27 16 22 O -0.17 0.17 8.89 7.65 0.07 0.23 16 23 H 0.38 -0.99 8.70 45.56 0.40 -0.60 16 24 H 0.14 -0.33 7.96 -51.93 -0.41 -0.74 16 25 H -0.26 -0.16 7.11 56.52 0.40 0.24 16 26 H -0.25 -0.24 7.11 56.52 0.40 0.16 16 27 H 0.16 0.34 8.06 -52.49 -0.42 -0.08 16 28 H 0.40 -1.95 7.70 -40.82 -0.31 -2.26 16 29 H 0.09 -0.26 6.62 -51.93 -0.34 -0.61 16 30 H 0.08 -0.09 8.14 -51.93 -0.42 -0.51 16 31 H 0.22 -1.31 8.06 -52.49 -0.42 -1.73 16 32 H 0.17 -0.67 7.12 -52.48 -0.37 -1.04 16 33 H 0.08 -0.17 8.14 -51.93 -0.42 -0.59 16 34 H 0.09 -0.28 8.07 -51.93 -0.42 -0.70 16 35 H 0.21 -1.50 7.47 -52.49 -0.39 -1.90 16 LS Contribution 313.14 15.07 4.72 4.72 Total: 0.00 -10.29 313.14 -6.85 -17.14 By element: Atomic # 1 Polarization: -7.65 SS G_CDS: -3.56 Total: -11.21 kcal Atomic # 6 Polarization: 1.67 SS G_CDS: -2.57 Total: -0.90 kcal Atomic # 7 Polarization: 0.13 SS G_CDS: 0.11 Total: 0.24 kcal Atomic # 8 Polarization: -3.14 SS G_CDS: -0.11 Total: -3.25 kcal Atomic # 14 Polarization: -1.29 SS G_CDS: -5.45 Total: -6.75 kcal Total LS contribution 4.72 Total: 4.72 kcal Total: -10.29 -6.85 -17.14 kcal The number of atoms in the molecule is 35 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_18339242_13456056.mol2 35 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 64.798 kcal (2) G-P(sol) polarization free energy of solvation -10.288 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 54.510 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.852 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -17.140 kcal (6) G-S(sol) free energy of system = (1) + (5) 47.658 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.57 seconds