Wall clock time and date at job start Sun Mar 7 2021 09:49:44 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42908 * 1 3 3 Si 1.86298 * 109.47258 * 2 1 4 4 C 1.50703 * 109.47135 * 239.99786 * 2 1 3 5 5 C 1.34486 * 125.49534 * 149.97425 * 4 2 1 6 6 C 1.46743 * 106.36757 * 180.02562 * 5 4 2 7 7 C 1.47269 * 126.96997 * 179.97438 * 6 5 4 8 8 O 1.21633 * 120.00004 * 180.02562 * 7 6 5 9 9 N 1.34777 * 120.00021 * 0.02859 * 7 6 5 10 10 C 1.46498 * 119.99828 * 180.27620 * 9 7 6 11 11 H 1.09002 * 112.85447 * 23.52517 * 10 9 7 12 12 C 1.53782 * 113.61542 * 154.72141 * 10 9 7 13 13 C 1.53779 * 87.08025 * 139.97648 * 12 10 9 14 14 H 1.08998 * 113.60914 * 89.20474 * 13 12 10 15 15 C 1.50699 * 113.61510 * 220.01541 * 13 12 10 16 16 N 1.30176 * 126.80718 * 264.69148 * 15 13 12 17 17 O 1.20920 * 111.60588 * 179.79744 * 16 15 13 18 18 C 1.34046 * 111.56558 * 0.48010 * 17 16 15 19 19 C 1.35445 * 106.44577 * 359.71414 * 18 17 16 20 20 C 1.53777 * 87.08273 * 334.57004 * 13 12 10 21 21 C 1.36337 * 106.06350 * 0.21307 * 6 5 4 22 22 C 1.50995 * 126.79338 * 180.36818 * 21 6 5 23 23 C 1.53400 * 108.30310 * 163.94686 * 22 21 6 24 24 C 1.53160 * 109.03711 * 48.28957 * 23 22 21 25 25 C 1.53136 * 109.52710 * 290.42766 * 24 23 22 26 26 N 1.35214 * 108.65432 * 359.66053 * 21 6 5 27 27 H 0.96693 * 113.99860 * 59.99811 * 1 2 3 28 28 H 1.08998 * 109.46771 * 120.00349 * 2 1 3 29 29 H 1.48500 * 109.99846 * 59.99914 * 3 2 1 30 30 H 1.48499 * 109.99931 * 181.31738 * 3 2 1 31 31 H 1.08007 * 126.81737 * 0.03757 * 5 4 2 32 32 H 0.97001 * 119.99727 * 359.97438 * 9 7 6 33 33 H 1.08997 * 113.61719 * 254.52880 * 12 10 9 34 34 H 1.08999 * 113.60977 * 25.42830 * 12 10 9 35 35 H 1.07998 * 126.77594 * 179.72318 * 18 17 16 36 36 H 1.07998 * 128.00847 * 180.02562 * 19 18 17 37 37 H 1.09001 * 113.61338 * 270.87786 * 20 13 12 38 38 H 1.09000 * 113.61355 * 139.98049 * 20 13 12 39 39 H 1.08998 * 109.84627 * 44.14929 * 22 21 6 40 40 H 1.09001 * 109.55215 * 283.58230 * 22 21 6 41 41 H 1.08998 * 109.54506 * 288.42391 * 23 22 21 42 42 H 1.08996 * 109.61537 * 168.19290 * 23 22 21 43 43 H 1.08994 * 109.46289 * 170.41368 * 24 23 22 44 44 H 1.09000 * 109.46465 * 50.44110 * 24 23 22 45 45 H 1.09003 * 109.56214 * 291.14363 * 25 24 23 46 46 H 1.09003 * 109.65509 * 170.86328 * 25 24 23 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4291 0.0000 0.0000 3 14 2.0501 1.7564 0.0000 4 6 1.9314 -0.7105 -1.2305 5 6 3.0855 -0.4461 -1.8683 6 6 3.1548 -1.3770 -3.0005 7 6 4.2324 -1.4783 -3.9992 8 8 4.1593 -2.3017 -4.8914 9 7 5.2997 -0.6586 -3.9245 10 6 6.3687 -0.7552 -4.9214 11 1 6.0337 -1.1968 -5.8600 12 6 7.1615 0.5499 -5.1031 13 6 8.4237 -0.3229 -5.2024 14 1 8.6524 -0.6457 -6.2180 15 6 9.6176 0.2592 -4.4906 16 7 10.5639 0.9815 -5.0173 17 8 11.3864 1.3075 -4.1930 18 6 11.0882 0.8208 -2.9802 19 6 9.9351 0.1240 -3.1195 20 6 7.6659 -1.3749 -4.3755 21 6 2.0168 -2.1256 -2.9437 22 6 1.6156 -3.2345 -3.8868 23 6 0.4947 -4.0470 -3.2260 24 6 -0.5703 -3.0854 -2.6905 25 6 -0.0058 -2.3096 -1.4969 26 7 1.2884 -1.7250 -1.8772 27 1 -0.3933 0.4417 -0.7650 28 1 1.7923 -0.5139 0.8900 29 1 1.5616 2.4678 1.2085 30 1 3.5347 1.7702 -0.0321 31 1 3.8163 0.3026 -1.6004 32 1 5.3578 -0.0017 -3.2131 33 1 6.9238 1.0804 -6.0252 34 1 7.1454 1.1962 -4.2256 35 1 11.6553 0.9574 -2.0713 36 1 9.3852 -0.4108 -2.3592 37 1 7.7879 -1.2548 -3.2990 38 1 7.8355 -2.3983 -4.7101 39 1 2.4711 -3.8807 -4.0834 40 1 1.2564 -2.8056 -4.8223 41 1 0.9049 -4.6318 -2.4028 42 1 0.0458 -4.7157 -3.9604 43 1 -1.4454 -3.6526 -2.3737 44 1 -0.8559 -2.3857 -3.4760 45 1 0.1332 -2.9869 -0.6542 46 1 -0.6969 -1.5148 -1.2162 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_18339242_16915396.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 09:49:44 Heat of formation + Delta-G solvation = 65.695637 kcal Electronic energy + Delta-G solvation = -29960.863745 eV Core-core repulsion = 25821.770036 eV Total energy + Delta-G solvation = -4139.093708 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 344.157 amu Computer time = 1.00 seconds Orbital eigenvalues (eV) -45.84404 -42.78413 -40.88583 -39.12752 -38.07266 -36.93358 -35.18162 -33.77299 -33.37464 -32.55353 -31.20926 -29.57905 -27.12895 -26.84781 -26.36078 -24.70955 -24.26630 -23.67536 -22.06153 -21.81447 -21.10935 -20.70382 -19.52863 -18.83848 -18.77653 -18.39994 -17.44094 -17.17607 -16.77748 -16.51441 -16.28831 -16.11580 -15.82493 -15.48435 -15.48010 -15.22171 -15.10907 -14.69866 -14.60350 -14.45113 -14.24244 -13.97393 -13.73471 -13.60008 -13.41708 -13.29921 -12.83287 -12.70755 -12.38563 -12.30415 -12.11079 -12.05364 -11.90837 -11.87638 -11.83232 -11.66356 -10.89309 -10.78414 -10.64560 -10.53098 -9.93072 -9.54927 -9.01149 -5.10617 0.58874 0.84951 0.97834 1.27672 1.33266 1.54704 1.73446 1.94521 2.34556 2.45684 2.68147 3.11467 3.15908 3.33100 3.41050 3.50491 3.55771 3.63831 3.70690 3.74890 3.76971 3.88802 3.98613 4.16339 4.22247 4.24174 4.30546 4.35261 4.38686 4.42168 4.54891 4.59349 4.63096 4.65769 4.69701 4.72412 4.75193 4.79814 4.88175 4.92636 4.95546 5.02929 5.04535 5.14784 5.17077 5.29145 5.64642 5.75091 6.04125 6.21172 6.29645 6.73075 7.36086 7.50488 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.543 6.543 2 C -0.045 4.045 3 Si 0.717 3.283 4 C -0.010 4.010 5 C -0.169 4.169 6 C -0.235 4.235 7 C 0.596 3.404 8 O -0.548 6.548 9 N -0.718 5.718 10 C 0.129 3.871 11 H 0.121 0.879 12 C -0.132 4.132 13 C -0.035 4.035 14 H 0.112 0.888 15 C 0.030 3.970 16 N -0.363 5.363 17 O 0.099 5.901 18 C -0.056 4.056 19 C -0.233 4.233 20 C -0.140 4.140 21 C 0.122 3.878 22 C -0.056 4.056 23 C -0.130 4.130 24 C -0.139 4.139 25 C 0.098 3.902 26 N -0.425 5.425 27 H 0.380 0.620 28 H 0.116 0.884 29 H -0.253 1.253 30 H -0.253 1.253 31 H 0.146 0.854 32 H 0.400 0.600 33 H 0.083 0.917 34 H 0.089 0.911 35 H 0.217 0.783 36 H 0.170 0.830 37 H 0.090 0.910 38 H 0.080 0.920 39 H 0.100 0.900 40 H 0.089 0.911 41 H 0.067 0.933 42 H 0.080 0.920 43 H 0.088 0.912 44 H 0.076 0.924 45 H 0.081 0.919 46 H 0.107 0.893 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -3.207 1.452 3.240 4.784 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.349 6.349 2 C -0.155 4.155 3 Si 0.617 3.383 4 C -0.119 4.119 5 C -0.193 4.193 6 C -0.245 4.245 7 C 0.385 3.615 8 O -0.427 6.427 9 N -0.368 5.368 10 C 0.024 3.976 11 H 0.139 0.861 12 C -0.172 4.172 13 C -0.055 4.055 14 H 0.130 0.870 15 C -0.129 4.129 16 N -0.066 5.066 17 O 0.032 5.968 18 C -0.138 4.138 19 C -0.254 4.254 20 C -0.180 4.180 21 C 0.004 3.996 22 C -0.093 4.093 23 C -0.167 4.167 24 C -0.176 4.176 25 C -0.022 4.022 26 N -0.101 5.101 27 H 0.228 0.772 28 H 0.133 0.867 29 H -0.177 1.177 30 H -0.177 1.177 31 H 0.164 0.836 32 H 0.235 0.765 33 H 0.102 0.898 34 H 0.107 0.893 35 H 0.233 0.767 36 H 0.188 0.812 37 H 0.108 0.892 38 H 0.099 0.901 39 H 0.118 0.882 40 H 0.107 0.893 41 H 0.086 0.914 42 H 0.098 0.902 43 H 0.107 0.893 44 H 0.094 0.906 45 H 0.099 0.901 46 H 0.125 0.875 Dipole moment (debyes) X Y Z Total from point charges -2.771 1.485 2.485 4.007 hybrid contribution -0.044 -0.716 1.528 1.688 sum -2.816 0.769 4.012 4.961 Atomic orbital electron populations 1.86488 1.17547 1.81139 1.49690 1.24880 0.84652 1.10422 0.95535 0.94077 0.80948 0.76413 0.86865 1.20636 0.96194 0.95605 0.99484 1.21726 0.97957 1.02720 0.96895 1.19819 0.97926 1.05095 1.01631 1.17352 0.80633 0.80012 0.83475 1.90767 1.79293 1.36715 1.35898 1.45702 1.21008 1.38912 1.31173 1.22384 0.85153 0.96533 0.93539 0.86135 1.23397 0.93474 0.96708 1.03581 1.20705 0.88241 0.96946 0.99584 0.86954 1.23414 0.97446 0.99504 0.92537 1.73873 1.01434 1.15939 1.15351 1.84870 1.40426 1.56632 1.14827 1.26082 0.98418 0.98250 0.91043 1.22708 0.99226 1.06450 0.97065 1.23557 0.94786 0.99074 1.00548 1.20395 0.91195 0.97635 0.90371 1.20515 0.99448 0.93475 0.95878 1.21729 0.95887 0.97943 1.01184 1.21939 0.99205 0.99007 0.97475 1.22311 0.82627 0.99032 0.98220 1.43869 1.17585 1.27128 1.21564 0.77249 0.86650 1.17712 1.17716 0.83610 0.76528 0.89848 0.89271 0.76662 0.81207 0.89174 0.90096 0.88195 0.89299 0.91396 0.90173 0.89336 0.90570 0.90093 0.87517 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 1.01 10.28 -35.23 -0.36 0.65 16 2 C -0.04 0.07 3.00 36.01 0.11 0.17 16 3 Si 0.72 -1.73 31.29 -169.99 -5.32 -7.05 16 4 C -0.01 0.00 6.15 -81.88 -0.50 -0.50 16 5 C -0.17 -0.06 9.08 -37.47 -0.34 -0.40 16 6 C -0.24 -0.54 6.28 -103.48 -0.65 -1.19 16 7 C 0.60 1.90 7.81 -12.59 -0.10 1.81 16 8 O -0.55 -3.37 14.93 5.25 0.08 -3.29 16 9 N -0.72 -0.24 5.35 -54.14 -0.29 -0.53 16 10 C 0.13 0.00 4.24 -67.12 -0.28 -0.29 16 11 H 0.12 0.16 7.46 -51.93 -0.39 -0.23 16 12 C -0.13 0.12 7.38 -25.92 -0.19 -0.07 16 13 C -0.04 0.00 4.29 -90.96 -0.39 -0.39 16 14 H 0.11 0.01 8.14 -51.93 -0.42 -0.41 16 15 C 0.03 0.05 6.70 -82.10 -0.55 -0.50 16 16 N -0.36 -1.36 12.07 33.42 0.40 -0.96 16 17 O 0.10 0.22 11.20 17.16 0.19 0.42 16 18 C -0.06 0.06 12.30 29.74 0.37 0.42 16 19 C -0.23 0.10 10.28 -39.38 -0.40 -0.30 16 20 C -0.14 0.08 7.27 -25.92 -0.19 -0.11 16 21 C 0.12 0.23 6.57 -81.64 -0.54 -0.31 16 22 C -0.06 -0.05 5.32 -27.53 -0.15 -0.20 16 23 C -0.13 0.16 5.98 -26.44 -0.16 0.00 16 24 C -0.14 0.33 5.92 -26.58 -0.16 0.17 16 25 C 0.10 -0.16 6.22 -3.69 -0.02 -0.18 16 26 N -0.43 -0.14 3.11 -107.37 -0.33 -0.48 16 27 H 0.38 -1.96 8.27 45.56 0.38 -1.59 16 28 H 0.12 -0.11 7.96 -51.93 -0.41 -0.52 16 29 H -0.25 -0.17 7.11 56.52 0.40 0.24 16 30 H -0.25 0.17 6.77 56.52 0.38 0.55 16 31 H 0.15 -0.22 6.30 -52.48 -0.33 -0.55 16 32 H 0.40 -0.68 7.85 -40.82 -0.32 -1.00 16 33 H 0.08 -0.08 8.14 -51.93 -0.42 -0.50 16 34 H 0.09 -0.13 8.07 -51.93 -0.42 -0.55 16 35 H 0.22 -1.12 8.06 -52.49 -0.42 -1.54 16 36 H 0.17 -0.45 7.12 -52.49 -0.37 -0.82 16 37 H 0.09 -0.12 6.62 -51.93 -0.34 -0.46 16 38 H 0.08 -0.01 8.14 -51.93 -0.42 -0.43 16 39 H 0.10 0.23 7.40 -51.93 -0.38 -0.15 16 40 H 0.09 0.09 8.14 -51.93 -0.42 -0.34 16 41 H 0.07 -0.05 8.12 -51.93 -0.42 -0.47 16 42 H 0.08 -0.16 8.14 -51.93 -0.42 -0.59 16 43 H 0.09 -0.32 8.14 -51.93 -0.42 -0.74 16 44 H 0.08 -0.17 8.11 -51.93 -0.42 -0.59 16 45 H 0.08 -0.11 8.14 -51.93 -0.42 -0.53 16 46 H 0.11 -0.30 5.67 -51.93 -0.29 -0.60 16 LS Contribution 370.90 15.07 5.59 5.59 Total: 0.00 -8.80 370.90 -10.52 -19.33 By element: Atomic # 1 Polarization: -5.48 SS G_CDS: -6.33 Total: -11.81 kcal Atomic # 6 Polarization: 2.28 SS G_CDS: -4.15 Total: -1.87 kcal Atomic # 7 Polarization: -1.75 SS G_CDS: -0.22 Total: -1.97 kcal Atomic # 8 Polarization: -2.13 SS G_CDS: -0.09 Total: -2.22 kcal Atomic # 14 Polarization: -1.73 SS G_CDS: -5.32 Total: -7.05 kcal Total LS contribution 5.59 Total: 5.59 kcal Total: -8.80 -10.52 -19.33 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_18339242_16915396.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 85.022 kcal (2) G-P(sol) polarization free energy of solvation -8.803 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 76.218 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.523 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.326 kcal (6) G-S(sol) free energy of system = (1) + (5) 65.696 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.00 seconds