Wall clock time and date at job start Sun Mar 7 2021 09:49:51 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42905 * 1 3 3 Si 1.86295 * 109.46915 * 2 1 4 4 C 1.50699 * 109.46972 * 119.99751 * 2 1 3 5 5 C 1.38268 * 119.94292 * 244.72777 * 4 2 1 6 6 C 1.38149 * 120.05340 * 179.72585 * 5 4 2 7 7 C 1.38729 * 119.94278 * 0.52241 * 6 5 4 8 8 O 1.35904 * 120.05660 * 179.72534 * 7 6 5 9 9 C 1.42901 * 116.99839 * 0.02562 * 8 7 6 10 10 C 1.50700 * 109.47339 * 179.97438 * 9 8 7 11 11 O 1.21289 * 119.99567 * 0.02562 * 10 9 8 12 12 N 1.34776 * 119.99981 * 179.97438 * 10 9 8 13 13 C 1.46499 * 119.99564 * 179.97438 * 12 10 9 14 14 H 1.09000 * 112.85038 * 23.80774 * 13 12 10 15 15 C 1.53782 * 113.61019 * 155.00375 * 13 12 10 16 16 C 1.53784 * 87.08217 * 139.98434 * 15 13 12 17 17 H 1.08998 * 113.61772 * 89.11360 * 16 15 13 18 18 C 1.50695 * 113.61598 * 219.93599 * 16 15 13 19 19 N 1.30179 * 126.80167 * 265.02371 * 18 16 15 20 20 O 1.20929 * 111.60390 * 179.97438 * 19 18 16 21 21 C 1.34046 * 111.56671 * 359.97438 * 20 19 18 22 22 C 1.35453 * 106.44516 * 359.74634 * 21 20 19 23 23 C 1.53781 * 113.61517 * 252.49788 * 13 12 10 24 24 C 1.38735 * 119.89319 * 359.75442 * 7 6 5 25 25 C 1.38147 * 119.93770 * 359.97438 * 24 7 6 26 26 H 0.96696 * 114.00036 * 60.00219 * 1 2 3 27 27 H 1.09000 * 109.47187 * 239.99852 * 2 1 3 28 28 H 1.48496 * 110.00262 * 59.99721 * 3 2 1 29 29 H 1.48497 * 109.99780 * 181.31712 * 3 2 1 30 30 H 1.07997 * 119.97326 * 359.97438 * 5 4 2 31 31 H 1.07997 * 120.02746 * 180.25437 * 6 5 4 32 32 H 1.09001 * 109.47109 * 299.99905 * 9 8 7 33 33 H 1.09001 * 109.47207 * 59.99920 * 9 8 7 34 34 H 0.96993 * 120.00448 * 0.02562 * 12 10 9 35 35 H 1.09006 * 113.61206 * 254.52639 * 15 13 12 36 36 H 1.08993 * 113.61554 * 25.43461 * 15 13 12 37 37 H 1.08000 * 126.77588 * 180.02562 * 21 20 19 38 38 H 1.08003 * 128.00810 * 180.22985 * 22 21 20 39 39 H 1.08997 * 113.61832 * 334.57364 * 23 13 12 40 40 H 1.09003 * 113.61312 * 105.47363 * 23 13 12 41 41 H 1.07997 * 120.03417 * 180.02562 * 24 7 6 42 42 H 1.08000 * 119.96695 * 179.97438 * 25 24 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4291 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9313 -0.7104 1.2305 5 6 2.6436 -0.0121 2.1880 6 6 3.1003 -0.6598 3.3196 7 6 2.8530 -2.0142 3.4896 8 8 3.3060 -2.6549 4.5993 9 6 4.0295 -1.8716 5.5506 10 6 4.4483 -2.7446 6.7054 11 8 4.1563 -3.9218 6.7127 12 7 5.1482 -2.2174 7.7295 13 6 5.5548 -3.0660 8.8523 14 1 5.6149 -4.1211 8.5854 15 6 6.7956 -2.5476 9.5984 16 6 6.0925 -2.9695 10.8994 17 1 6.2990 -3.9986 11.1935 18 6 6.2760 -1.9899 12.0298 19 7 7.1775 -2.0411 12.9675 20 8 7.0745 -1.1125 13.7353 21 6 6.0624 -0.3020 13.3954 22 6 5.5076 -0.8293 12.2778 23 6 4.7639 -2.7994 10.1440 24 6 2.1430 -2.7139 2.5246 25 6 1.6837 -2.0603 1.3975 26 1 -0.3933 0.4417 -0.7650 27 1 1.7924 -0.5139 -0.8900 28 1 1.5614 2.4679 1.2084 29 1 3.5345 1.7703 -0.0321 30 1 2.8397 1.0413 2.0532 31 1 3.6530 -0.1131 4.0693 32 1 4.9143 -1.4485 5.0750 33 1 3.3934 -1.0658 5.9168 34 1 5.3820 -1.2761 7.7235 35 1 7.7012 -3.1163 9.3874 36 1 6.9403 -1.4710 9.5097 37 1 5.7534 0.5967 13.9085 38 1 4.6703 -0.4521 11.7094 39 1 4.3531 -1.7916 10.2044 40 1 4.0293 -3.5714 10.3733 41 1 1.9489 -3.7682 2.6548 42 1 1.1313 -2.6046 0.6458 There are 60 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 60 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_18339242_2989410.mol2 42 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 09:49:51 Heat of formation + Delta-G solvation = 25.371236 kcal Electronic energy + Delta-G solvation = -26452.381100 eV Core-core repulsion = 22369.357751 eV Total energy + Delta-G solvation = -4083.023349 eV No. of doubly occupied orbitals = 60 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 331.130 amu Computer time = 0.87 seconds Orbital eigenvalues (eV) -45.93424 -41.67610 -41.04470 -39.73039 -38.76950 -37.20809 -35.43868 -34.04647 -32.66577 -32.47029 -31.87259 -29.89716 -27.03517 -26.89094 -26.11144 -24.28165 -23.97222 -22.67941 -22.09419 -21.67645 -20.88683 -19.58194 -18.90456 -18.50890 -18.45227 -18.26669 -17.58796 -17.48383 -17.00138 -16.74393 -16.43466 -15.96357 -15.72184 -15.52566 -15.47168 -15.07084 -14.54815 -14.47108 -14.17123 -13.96811 -13.88020 -13.85084 -13.65499 -13.51719 -13.41241 -12.91308 -12.50865 -12.44474 -12.19333 -12.07824 -11.96537 -11.88062 -11.84734 -11.02608 -10.92758 -10.63208 -10.33864 -10.25781 -10.08289 -9.24970 -5.01594 0.23708 0.25963 0.50237 1.16740 1.24629 1.36821 1.39301 1.59048 1.91673 2.26944 2.46500 2.58807 3.00820 3.15483 3.33937 3.38466 3.41956 3.51778 3.63275 3.72995 3.74283 3.78510 3.82943 3.85016 3.91777 4.12414 4.19552 4.28688 4.32795 4.42276 4.44632 4.47531 4.54312 4.58176 4.60525 4.73414 4.79984 4.88832 4.93495 5.03660 5.10970 5.19196 5.31278 5.46822 5.62670 6.15532 6.29781 6.60591 7.00093 7.26934 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.546 6.546 2 C -0.067 4.067 3 Si 0.682 3.318 4 C -0.112 4.112 5 C -0.082 4.082 6 C -0.205 4.205 7 C 0.134 3.866 8 O -0.287 6.287 9 C 0.039 3.961 10 C 0.518 3.482 11 O -0.510 6.510 12 N -0.717 5.717 13 C 0.127 3.873 14 H 0.123 0.877 15 C -0.132 4.132 16 C -0.034 4.034 17 H 0.114 0.886 18 C 0.028 3.972 19 N -0.361 5.361 20 O 0.100 5.900 21 C -0.054 4.054 22 C -0.234 4.234 23 C -0.140 4.140 24 C -0.143 4.143 25 C -0.048 4.048 26 H 0.382 0.618 27 H 0.074 0.926 28 H -0.252 1.252 29 H -0.256 1.256 30 H 0.121 0.879 31 H 0.131 0.869 32 H 0.095 0.905 33 H 0.095 0.905 34 H 0.403 0.597 35 H 0.085 0.915 36 H 0.091 0.909 37 H 0.218 0.782 38 H 0.171 0.829 39 H 0.092 0.908 40 H 0.083 0.917 41 H 0.139 0.861 42 H 0.137 0.863 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.467 7.085 -2.443 7.509 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.352 6.352 2 C -0.178 4.178 3 Si 0.583 3.417 4 C -0.112 4.112 5 C -0.100 4.100 6 C -0.223 4.223 7 C 0.089 3.911 8 O -0.199 6.199 9 C -0.040 4.040 10 C 0.302 3.698 11 O -0.383 6.383 12 N -0.370 5.370 13 C 0.022 3.978 14 H 0.141 0.859 15 C -0.171 4.171 16 C -0.054 4.054 17 H 0.132 0.868 18 C -0.131 4.131 19 N -0.064 5.064 20 O 0.033 5.967 21 C -0.136 4.136 22 C -0.255 4.255 23 C -0.179 4.179 24 C -0.162 4.162 25 C -0.066 4.066 26 H 0.229 0.771 27 H 0.092 0.908 28 H -0.176 1.176 29 H -0.180 1.180 30 H 0.138 0.862 31 H 0.149 0.851 32 H 0.113 0.887 33 H 0.113 0.887 34 H 0.238 0.762 35 H 0.103 0.897 36 H 0.109 0.891 37 H 0.234 0.766 38 H 0.188 0.812 39 H 0.110 0.890 40 H 0.102 0.898 41 H 0.157 0.843 42 H 0.155 0.845 Dipole moment (debyes) X Y Z Total from point charges 0.879 5.429 -1.118 5.612 hybrid contribution -0.474 0.812 0.010 0.941 sum 0.405 6.241 -1.108 6.352 Atomic orbital electron populations 1.86502 1.17287 1.81795 1.49657 1.24613 0.85654 1.10156 0.97348 0.95300 0.80706 0.78284 0.87377 1.19260 1.01358 0.94468 0.96136 1.20663 0.97380 0.98655 0.93261 1.21108 1.06954 0.93815 1.00467 1.19040 0.94464 0.90839 0.86790 1.86175 1.68525 1.36474 1.28717 1.22487 0.97908 0.94087 0.89532 1.20059 0.78337 0.88473 0.82888 1.90793 1.53064 1.16162 1.78268 1.45772 1.56995 1.13376 1.20899 1.22505 0.94583 0.96950 0.83743 0.85904 1.23406 0.97900 1.02428 0.93354 1.20676 0.98068 0.97536 0.89074 0.86806 1.23374 0.94318 0.97748 0.97677 1.73886 1.21917 1.07185 1.03421 1.84880 1.42472 1.26811 1.42506 1.26103 0.90714 0.98817 0.97950 1.22698 1.05004 0.97498 1.00341 1.23563 0.96342 1.03613 0.94429 1.20547 1.01060 1.01152 0.93407 1.20858 0.96028 0.93334 0.96366 0.77068 0.90826 1.17649 1.18049 0.86167 0.85102 0.88704 0.88724 0.76207 0.89657 0.89089 0.76585 0.81191 0.88982 0.89830 0.84347 0.84546 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.55 -0.10 12.81 -35.23 -0.45 -0.55 16 2 C -0.07 0.01 2.79 36.01 0.10 0.11 16 3 Si 0.68 -0.88 29.84 -169.99 -5.07 -5.95 16 4 C -0.11 -0.25 5.39 -104.60 -0.56 -0.82 16 5 C -0.08 -0.17 8.66 -39.60 -0.34 -0.52 16 6 C -0.20 -0.28 9.04 -39.43 -0.36 -0.64 16 7 C 0.13 0.37 6.69 -39.22 -0.26 0.11 16 8 O -0.29 -0.95 9.67 -39.35 -0.38 -1.33 16 9 C 0.04 -0.03 5.22 36.01 0.19 0.16 16 10 C 0.52 0.60 7.91 -10.99 -0.09 0.52 16 11 O -0.51 -3.13 16.10 -14.36 -0.23 -3.36 16 12 N -0.72 1.53 5.35 -53.02 -0.28 1.25 16 13 C 0.13 -0.19 4.24 -67.12 -0.28 -0.47 16 14 H 0.12 0.03 7.46 -51.93 -0.39 -0.36 16 15 C -0.13 0.29 7.38 -25.92 -0.19 0.10 16 16 C -0.03 0.03 4.29 -90.96 -0.39 -0.36 16 17 H 0.11 -0.08 8.14 -51.93 -0.42 -0.51 16 18 C 0.03 0.02 6.70 -82.10 -0.55 -0.53 16 19 N -0.36 -1.10 12.07 33.43 0.40 -0.70 16 20 O 0.10 0.16 11.20 17.16 0.19 0.35 16 21 C -0.05 0.10 12.30 29.74 0.37 0.46 16 22 C -0.23 0.33 10.28 -39.38 -0.40 -0.07 16 23 C -0.14 0.27 7.27 -25.92 -0.19 0.08 16 24 C -0.14 -0.38 9.99 -39.43 -0.39 -0.77 16 25 C -0.05 -0.10 9.68 -39.61 -0.38 -0.48 16 26 H 0.38 -1.86 8.74 45.56 0.40 -1.46 16 27 H 0.07 -0.13 7.96 -51.93 -0.41 -0.54 16 28 H -0.25 -0.43 7.05 56.52 0.40 -0.04 16 29 H -0.26 -0.28 7.11 56.52 0.40 0.12 16 30 H 0.12 0.15 4.86 -52.49 -0.26 -0.11 16 31 H 0.13 -0.20 6.30 -52.49 -0.33 -0.53 16 32 H 0.10 -0.30 7.66 -51.93 -0.40 -0.70 16 33 H 0.09 -0.30 7.66 -51.93 -0.40 -0.70 16 34 H 0.40 -2.12 8.73 -40.82 -0.36 -2.48 16 35 H 0.08 -0.17 8.14 -51.93 -0.42 -0.59 16 36 H 0.09 -0.27 8.07 -51.93 -0.42 -0.69 16 37 H 0.22 -1.28 8.06 -52.49 -0.42 -1.71 16 38 H 0.17 -0.65 7.13 -52.48 -0.37 -1.02 16 39 H 0.09 -0.28 6.63 -51.93 -0.34 -0.62 16 40 H 0.08 -0.10 8.14 -51.93 -0.42 -0.52 16 41 H 0.14 0.24 8.06 -52.49 -0.42 -0.18 16 42 H 0.14 0.07 8.06 -52.49 -0.42 -0.35 16 LS Contribution 358.83 15.07 5.41 5.41 Total: 0.00 -11.81 358.83 -9.18 -20.99 By element: Atomic # 1 Polarization: -7.97 SS G_CDS: -5.02 Total: -12.98 kcal Atomic # 6 Polarization: 0.62 SS G_CDS: -3.74 Total: -3.12 kcal Atomic # 7 Polarization: 0.43 SS G_CDS: 0.12 Total: 0.55 kcal Atomic # 8 Polarization: -4.01 SS G_CDS: -0.87 Total: -4.89 kcal Atomic # 14 Polarization: -0.88 SS G_CDS: -5.07 Total: -5.95 kcal Total LS contribution 5.41 Total: 5.41 kcal Total: -11.81 -9.18 -20.99 kcal The number of atoms in the molecule is 42 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_18339242_2989410.mol2 42 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 46.358 kcal (2) G-P(sol) polarization free energy of solvation -11.811 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 34.547 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.175 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.986 kcal (6) G-S(sol) free energy of system = (1) + (5) 25.371 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.88 seconds