Wall clock time and date at job start Sun Mar 7 2021 09:50:18 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42901 * 1 3 3 Si 1.86301 * 109.47182 * 2 1 4 4 C 1.50696 * 109.47185 * 119.99778 * 2 1 3 5 5 C 1.38274 * 119.94301 * 65.00307 * 4 2 1 6 6 C 1.38141 * 120.05552 * 180.27916 * 5 4 2 7 7 C 1.38738 * 119.94395 * 359.44290 * 6 5 4 8 8 O 1.35897 * 120.05494 * 180.25974 * 7 6 5 9 9 C 1.42901 * 117.00083 * 0.31613 * 8 7 6 10 10 C 1.50700 * 109.47108 * 180.02562 * 9 8 7 11 11 C 1.36408 * 125.80573 * 89.99840 * 10 9 8 12 12 C 1.47379 * 127.19381 * 359.95801 * 11 10 9 13 13 O 1.21614 * 119.99546 * 359.97438 * 12 11 10 14 14 N 1.34773 * 120.00348 * 180.02562 * 12 11 10 15 15 C 1.46507 * 119.99925 * 180.02562 * 14 12 11 16 16 H 1.09000 * 112.84892 * 23.80147 * 15 14 12 17 17 C 1.53782 * 113.61191 * 154.99865 * 15 14 12 18 18 C 1.53779 * 87.07899 * 139.98052 * 17 15 14 19 19 H 1.09000 * 113.61889 * 89.11815 * 18 17 15 20 20 C 1.50705 * 113.61451 * 220.01864 * 18 17 15 21 21 N 1.30180 * 126.80017 * 265.02570 * 20 18 17 22 22 O 1.20918 * 111.59980 * 179.97438 * 21 20 18 23 23 C 1.34044 * 111.57171 * 359.97438 * 22 21 20 24 24 C 1.35448 * 106.44290 * 359.74781 * 23 22 21 25 25 C 1.53781 * 113.61114 * 252.49487 * 15 14 12 26 26 C 1.47023 * 105.61891 * 179.97438 * 11 10 9 27 27 C 1.34177 * 105.95011 * 0.02562 * 26 11 10 28 28 O 1.33653 * 125.79923 * 269.69018 * 10 9 8 29 29 C 1.38730 * 119.88604 * 0.57278 * 7 6 5 30 30 C 1.38149 * 119.94512 * 359.70901 * 29 7 6 31 31 H 0.96696 * 114.00119 * 59.99558 * 1 2 3 32 32 H 1.08998 * 109.47382 * 240.00321 * 2 1 3 33 33 H 1.48503 * 110.00048 * 59.99824 * 3 2 1 34 34 H 1.48497 * 110.00195 * 181.31741 * 3 2 1 35 35 H 1.08002 * 119.96836 * 359.97438 * 5 4 2 36 36 H 1.07998 * 120.02987 * 179.70379 * 6 5 4 37 37 H 1.09001 * 109.46722 * 299.99905 * 9 8 7 38 38 H 1.08994 * 109.47228 * 60.00588 * 9 8 7 39 39 H 0.96999 * 120.00435 * 359.97438 * 14 12 11 40 40 H 1.09000 * 113.61527 * 254.52382 * 17 15 14 41 41 H 1.08995 * 113.61605 * 25.34890 * 17 15 14 42 42 H 1.07996 * 126.77536 * 180.02562 * 23 22 21 43 43 H 1.07999 * 128.00515 * 180.22807 * 24 23 22 44 44 H 1.08996 * 113.61728 * 334.56432 * 25 15 14 45 45 H 1.09005 * 113.61268 * 105.47688 * 25 15 14 46 46 H 1.08002 * 127.02359 * 180.02562 * 26 11 10 47 47 H 1.08004 * 125.43458 * 179.97438 * 27 26 11 48 48 H 1.07998 * 120.02609 * 179.72431 * 29 7 6 49 49 H 1.07997 * 119.96847 * 179.97438 * 30 29 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9313 -0.7103 1.2304 5 6 1.6841 -2.0605 1.3972 6 6 2.1385 -2.7127 2.5270 7 6 2.8535 -2.0145 3.4893 8 8 3.3061 -2.6550 4.5990 9 6 3.0155 -4.0500 4.7069 10 6 3.5912 -4.5852 5.9927 11 6 2.9502 -4.6311 7.1959 12 6 1.5809 -4.1747 7.4938 13 8 0.8948 -3.6941 6.6122 14 7 1.0893 -4.2891 8.7435 15 6 -0.2721 -3.8360 9.0395 16 1 -0.9137 -3.8197 8.1584 17 6 -0.9062 -4.5405 10.2504 18 6 -1.4924 -3.1731 10.6395 19 1 -2.4683 -2.9743 10.1965 20 6 -1.4541 -2.8994 12.1210 21 7 -2.4115 -3.1092 12.9778 22 8 -2.0845 -2.7907 14.0975 23 6 -0.8315 -2.3154 14.1286 24 6 -0.3689 -2.3705 12.8568 25 6 -0.3239 -2.5400 9.8657 26 6 3.9109 -5.2306 8.1336 27 6 5.0172 -5.4824 7.4173 28 8 4.8146 -5.1008 6.1466 29 6 3.1000 -0.6598 3.3198 30 6 2.6383 -0.0109 2.1909 31 1 -0.3933 0.4417 -0.7650 32 1 1.7924 -0.5138 -0.8900 33 1 1.5615 2.4679 1.2085 34 1 3.5346 1.7703 -0.0321 35 1 1.1309 -2.6045 0.6459 36 1 1.9410 -3.7663 2.6591 37 1 1.9355 -4.1974 4.7036 38 1 3.4571 -4.5795 3.8627 39 1 1.6366 -4.6722 9.4468 40 1 -1.6616 -5.2784 9.9801 41 1 -0.1768 -4.9234 10.9641 42 1 -0.2952 -1.9628 14.9971 43 1 0.6030 -2.0759 12.4893 44 1 0.5646 -2.3748 10.4750 45 1 -0.6093 -1.6630 9.2848 46 1 3.7574 -5.4280 9.1842 47 1 5.9243 -5.9255 7.8010 48 1 3.6525 -0.1131 4.0695 49 1 2.8297 1.0438 2.0588 There are 72 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 72 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_18339242_4549634.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 09:50:18 Heat of formation + Delta-G solvation = 44.396915 kcal Electronic energy + Delta-G solvation = -35618.420036 eV Core-core repulsion = 30677.323470 eV Total energy + Delta-G solvation = -4941.096566 eV No. of doubly occupied orbitals = 72 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 397.145 amu Computer time = 1.42 seconds Orbital eigenvalues (eV) -45.89766 -43.77264 -41.20950 -41.11606 -39.43760 -39.02695 -37.18736 -35.38456 -34.37580 -33.57382 -32.78388 -32.59343 -32.06373 -31.39284 -28.16907 -27.01417 -26.93532 -26.03698 -24.71126 -23.96841 -23.77983 -22.69479 -22.13636 -21.69718 -21.37698 -20.53036 -19.43745 -19.12351 -18.85954 -18.45456 -18.34023 -17.56607 -17.34827 -17.28464 -16.88244 -16.70178 -16.58089 -16.39987 -16.00807 -15.98253 -15.74182 -15.51334 -15.10290 -14.71760 -14.49370 -14.37455 -14.22928 -14.07119 -14.03553 -13.83513 -13.73658 -13.67611 -13.53727 -13.39654 -13.18294 -12.81272 -12.40420 -12.27040 -12.09204 -12.00806 -11.86741 -11.79599 -11.76837 -11.02817 -10.99749 -10.92687 -10.59243 -10.25696 -10.15654 -9.98190 -9.89174 -9.12164 -4.93768 0.00547 0.31625 0.41611 0.54030 0.89072 1.21730 1.33235 1.46131 1.68031 2.01726 2.05406 2.14149 2.31559 2.49747 2.69657 3.06106 3.22168 3.26261 3.44376 3.48723 3.53794 3.59996 3.66616 3.79384 3.79515 3.86091 3.90073 3.92010 3.98003 4.14747 4.16876 4.28380 4.29538 4.33555 4.34789 4.46035 4.51595 4.54615 4.60356 4.61641 4.64707 4.65481 4.71348 4.81084 4.86736 4.98256 5.02312 5.06479 5.12737 5.21577 5.36281 5.43012 5.54977 5.70575 5.81761 6.34876 6.40664 6.68135 7.14129 7.30879 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.546 6.546 2 C -0.066 4.066 3 Si 0.680 3.320 4 C -0.114 4.114 5 C -0.047 4.047 6 C -0.203 4.203 7 C 0.142 3.858 8 O -0.303 6.303 9 C 0.135 3.865 10 C 0.066 3.934 11 C -0.211 4.211 12 C 0.590 3.410 13 O -0.531 6.531 14 N -0.711 5.711 15 C 0.127 3.873 16 H 0.123 0.877 17 C -0.132 4.132 18 C -0.034 4.034 19 H 0.114 0.886 20 C 0.028 3.972 21 N -0.362 5.362 22 O 0.100 5.900 23 C -0.055 4.055 24 C -0.233 4.233 25 C -0.140 4.140 26 C -0.196 4.196 27 C -0.014 4.014 28 O -0.165 6.165 29 C -0.143 4.143 30 C -0.083 4.083 31 H 0.381 0.619 32 H 0.073 0.927 33 H -0.250 1.250 34 H -0.255 1.255 35 H 0.131 0.869 36 H 0.133 0.867 37 H 0.116 0.884 38 H 0.084 0.916 39 H 0.402 0.598 40 H 0.084 0.916 41 H 0.090 0.910 42 H 0.217 0.783 43 H 0.171 0.829 44 H 0.091 0.909 45 H 0.082 0.918 46 H 0.162 0.838 47 H 0.215 0.785 48 H 0.135 0.865 49 H 0.124 0.876 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.824 -1.019 0.278 3.968 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.352 6.352 2 C -0.176 4.176 3 Si 0.581 3.419 4 C -0.114 4.114 5 C -0.065 4.065 6 C -0.222 4.222 7 C 0.097 3.903 8 O -0.217 6.217 9 C 0.061 3.939 10 C 0.012 3.988 11 C -0.216 4.216 12 C 0.378 3.622 13 O -0.409 6.409 14 N -0.361 5.361 15 C 0.022 3.978 16 H 0.141 0.859 17 C -0.171 4.171 18 C -0.054 4.054 19 H 0.132 0.868 20 C -0.131 4.131 21 N -0.065 5.065 22 O 0.033 5.967 23 C -0.137 4.137 24 C -0.255 4.255 25 C -0.179 4.179 26 C -0.215 4.215 27 C -0.081 4.081 28 O -0.060 6.060 29 C -0.161 4.161 30 C -0.100 4.100 31 H 0.228 0.772 32 H 0.090 0.910 33 H -0.175 1.175 34 H -0.180 1.180 35 H 0.149 0.851 36 H 0.150 0.850 37 H 0.134 0.866 38 H 0.102 0.898 39 H 0.237 0.763 40 H 0.103 0.897 41 H 0.108 0.892 42 H 0.234 0.766 43 H 0.188 0.812 44 H 0.110 0.890 45 H 0.101 0.899 46 H 0.179 0.821 47 H 0.231 0.769 48 H 0.153 0.847 49 H 0.142 0.858 Dipole moment (debyes) X Y Z Total from point charges 2.967 -0.840 0.476 3.120 hybrid contribution 1.231 -0.649 0.848 1.629 sum 4.198 -1.489 1.324 4.647 Atomic orbital electron populations 1.86510 1.17352 1.81749 1.49611 1.24603 0.85594 1.10139 0.97305 0.95447 0.80784 0.78298 0.87367 1.19231 1.01645 0.94380 0.96180 1.20786 0.95852 0.93408 0.96441 1.21302 1.03899 1.00914 0.96098 1.18895 0.93810 0.91957 0.85607 1.86072 1.73828 1.22203 1.39614 1.21114 1.01223 0.80378 0.91216 1.21942 0.83078 0.97999 0.95732 1.21220 0.96723 1.09829 0.93786 1.17218 0.84726 0.77622 0.82610 1.90812 1.59719 1.44545 1.45789 1.45705 1.15764 1.64101 1.10581 1.22487 0.83318 0.94323 0.97711 0.85947 1.23396 1.00476 0.96365 0.96849 1.20686 1.00513 0.97564 0.86590 0.86841 1.23385 0.90515 1.01497 0.97654 1.73880 1.23526 1.18412 0.90636 1.84872 1.28031 1.58939 1.24852 1.26093 0.86102 1.00774 1.00692 1.22700 1.02076 1.07786 0.92924 1.23558 0.97845 0.98535 0.97987 1.22885 0.93078 1.04890 1.00677 1.24065 1.01032 1.02698 0.80297 1.83800 1.30768 1.60838 1.30607 1.20289 1.04787 0.91754 0.99304 1.20673 0.97559 0.98652 0.93119 0.77166 0.90951 1.17527 1.17965 0.85074 0.84957 0.86599 0.89823 0.76296 0.89725 0.89171 0.76602 0.81201 0.89044 0.89907 0.82091 0.76902 0.84744 0.85841 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.55 -0.63 12.81 -35.23 -0.45 -1.09 16 2 C -0.07 -0.06 2.79 36.00 0.10 0.04 16 3 Si 0.68 -0.16 29.85 -169.99 -5.07 -5.23 16 4 C -0.11 -0.40 5.38 -104.60 -0.56 -0.96 16 5 C -0.05 -0.14 9.68 -39.60 -0.38 -0.53 16 6 C -0.20 -0.62 9.04 -39.43 -0.36 -0.98 16 7 C 0.14 0.62 6.69 -39.21 -0.26 0.35 16 8 O -0.30 -1.37 10.12 -19.42 -0.20 -1.57 16 9 C 0.14 0.31 4.74 36.01 0.17 0.48 16 10 C 0.07 0.16 7.00 -34.97 -0.24 -0.09 16 11 C -0.21 -0.36 6.31 -103.28 -0.65 -1.02 16 12 C 0.59 1.56 7.81 -12.54 -0.10 1.46 16 13 O -0.53 -3.10 14.44 5.27 0.08 -3.02 16 14 N -0.71 0.33 5.35 -54.10 -0.29 0.04 16 15 C 0.13 -0.07 4.24 -67.11 -0.28 -0.35 16 16 H 0.12 0.11 7.46 -51.93 -0.39 -0.27 16 17 C -0.13 0.19 7.38 -25.92 -0.19 0.00 16 18 C -0.03 0.01 4.29 -90.96 -0.39 -0.38 16 19 H 0.11 -0.02 8.14 -51.93 -0.42 -0.44 16 20 C 0.03 0.04 6.70 -82.10 -0.55 -0.51 16 21 N -0.36 -1.25 12.07 33.42 0.40 -0.85 16 22 O 0.10 0.20 11.20 17.17 0.19 0.39 16 23 C -0.06 0.08 12.30 29.74 0.37 0.44 16 24 C -0.23 0.20 10.28 -39.38 -0.40 -0.21 16 25 C -0.14 0.13 7.27 -25.92 -0.19 -0.06 16 26 C -0.20 0.25 10.60 -37.45 -0.40 -0.15 16 27 C -0.01 0.02 12.03 29.30 0.35 0.37 16 28 O -0.17 -0.24 10.52 7.66 0.08 -0.16 16 29 C -0.14 -0.59 9.99 -39.43 -0.39 -0.98 16 30 C -0.08 -0.32 8.66 -39.61 -0.34 -0.66 16 31 H 0.38 -1.53 8.74 45.56 0.40 -1.13 16 32 H 0.07 -0.07 7.96 -51.93 -0.41 -0.48 16 33 H -0.25 -0.75 7.05 56.52 0.40 -0.35 16 34 H -0.25 -0.54 7.11 56.52 0.40 -0.14 16 35 H 0.13 0.19 8.06 -52.49 -0.42 -0.24 16 36 H 0.13 0.12 6.30 -52.49 -0.33 -0.21 16 37 H 0.12 0.30 5.99 -51.93 -0.31 -0.01 16 38 H 0.08 0.01 7.68 -51.93 -0.40 -0.39 16 39 H 0.40 -1.20 7.90 -40.82 -0.32 -1.52 16 40 H 0.08 -0.12 8.14 -51.93 -0.42 -0.54 16 41 H 0.09 -0.19 8.07 -51.93 -0.42 -0.61 16 42 H 0.22 -1.20 8.06 -52.49 -0.42 -1.62 16 43 H 0.17 -0.53 7.12 -52.49 -0.37 -0.90 16 44 H 0.09 -0.16 6.62 -51.93 -0.34 -0.51 16 45 H 0.08 -0.01 8.14 -51.93 -0.42 -0.43 16 46 H 0.16 -0.70 7.74 -52.49 -0.41 -1.10 16 47 H 0.21 -1.14 8.06 -52.48 -0.42 -1.57 16 48 H 0.13 0.38 8.06 -52.49 -0.42 -0.04 16 49 H 0.12 0.36 4.86 -52.49 -0.26 0.11 16 LS Contribution 416.80 15.07 6.28 6.28 Total: 0.00 -11.92 416.80 -9.42 -21.34 By element: Atomic # 1 Polarization: -6.68 SS G_CDS: -5.72 Total: -12.40 kcal Atomic # 6 Polarization: 0.98 SS G_CDS: -4.71 Total: -3.73 kcal Atomic # 7 Polarization: -0.92 SS G_CDS: 0.11 Total: -0.81 kcal Atomic # 8 Polarization: -5.15 SS G_CDS: -0.30 Total: -5.45 kcal Atomic # 14 Polarization: -0.16 SS G_CDS: -5.07 Total: -5.23 kcal Total LS contribution 6.28 Total: 6.28 kcal Total: -11.92 -9.42 -21.34 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_18339242_4549634.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 65.734 kcal (2) G-P(sol) polarization free energy of solvation -11.921 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 53.812 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.415 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.337 kcal (6) G-S(sol) free energy of system = (1) + (5) 44.397 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.42 seconds