Wall clock time and date at job start Sun Mar 7 2021 09:50:23 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42904 * 1 3 3 C 1.35998 * 116.99716 * 2 1 4 4 C 1.39153 * 120.07153 * 180.02562 * 3 2 1 5 5 O 1.36003 * 120.07084 * 0.04706 * 4 3 2 6 6 C 1.42904 * 116.99524 * 179.97438 * 5 4 3 7 7 C 1.50705 * 109.46515 * 180.02562 * 6 5 4 8 8 O 1.21276 * 120.00405 * 359.97438 * 7 6 5 9 9 N 1.34776 * 119.99433 * 179.97438 * 7 6 5 10 10 C 1.46507 * 119.99721 * 179.97438 * 9 7 6 11 11 H 1.08998 * 112.84606 * 23.80476 * 10 9 7 12 12 C 1.53778 * 113.61102 * 155.00029 * 10 9 7 13 13 C 1.53785 * 87.08014 * 139.98165 * 12 10 9 14 14 H 1.08998 * 113.60981 * 89.20040 * 13 12 10 15 15 C 1.50693 * 113.61263 * 220.01556 * 13 12 10 16 16 N 1.30181 * 126.80394 * 264.68380 * 15 13 12 17 17 O 1.20921 * 111.60087 * 179.80093 * 16 15 13 18 18 C 1.34035 * 111.57202 * 0.48705 * 17 16 15 19 19 C 1.35450 * 106.44217 * 359.70676 * 18 17 16 20 20 C 1.53779 * 87.07980 * 334.56628 * 13 12 10 21 21 C 1.38562 * 119.85486 * 180.02562 * 4 3 2 22 22 C 1.38240 * 119.99958 * 0.02562 * 21 4 3 23 23 N 1.48007 * 119.92897 * 179.97438 * 22 21 4 24 24 O 1.21803 * 119.99745 * 359.97438 * 23 22 21 25 25 O 1.21799 * 120.00052 * 179.72344 * 23 22 21 26 26 C 1.38257 * 120.14383 * 0.24627 * 22 21 4 27 27 C 1.50706 * 119.92404 * 179.74899 * 26 22 21 28 28 O 1.42891 * 109.47213 * 75.00334 * 27 26 22 29 29 Si 1.86299 * 109.46945 * 195.00276 * 27 26 22 30 30 C 1.38243 * 120.14602 * 359.49880 * 26 22 21 31 31 H 1.08996 * 109.47157 * 60.00095 * 1 2 3 32 32 H 1.09006 * 109.47078 * 179.97438 * 1 2 3 33 33 H 1.08998 * 109.47353 * 299.99530 * 1 2 3 34 34 H 1.08997 * 109.46886 * 299.99732 * 6 5 4 35 35 H 1.08996 * 109.47434 * 60.00264 * 6 5 4 36 36 H 0.97003 * 120.00347 * 359.97438 * 9 7 6 37 37 H 1.09009 * 113.61063 * 254.52768 * 12 10 9 38 38 H 1.08997 * 113.61755 * 25.34689 * 12 10 9 39 39 H 1.07998 * 126.78200 * 179.72999 * 18 17 16 40 40 H 1.08009 * 128.00490 * 179.97438 * 19 18 17 41 41 H 1.09000 * 113.61137 * 270.88639 * 20 13 12 42 42 H 1.09004 * 113.61408 * 139.98227 * 20 13 12 43 43 H 1.08004 * 119.99948 * 179.97438 * 21 4 3 44 44 H 1.09004 * 109.47010 * 315.00544 * 27 26 22 45 45 H 0.96708 * 114.00053 * 59.99518 * 28 27 26 46 46 H 1.48498 * 110.00009 * 179.97438 * 29 27 26 47 47 H 1.48494 * 110.00098 * 301.32162 * 29 27 26 48 48 H 1.07997 * 119.99868 * 180.25080 * 30 26 22 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0464 1.2118 0.0000 4 6 3.4359 1.2864 -0.0005 5 8 4.1795 0.1477 -0.0020 6 6 5.6004 0.3008 -0.0031 7 6 6.2519 -1.0582 -0.0053 8 8 5.5671 -2.0590 -0.0055 9 7 7.5957 -1.1611 -0.0071 10 6 8.2292 -2.4821 -0.0087 11 1 7.5829 -3.2608 -0.4137 12 6 9.6462 -2.4850 -0.6060 13 6 10.0328 -3.4614 0.5174 14 1 9.8815 -4.5089 0.2566 15 6 11.3942 -3.1957 1.1061 16 7 12.5141 -3.7689 0.7714 17 8 13.4426 -3.3441 1.4191 18 6 13.0451 -2.4149 2.2995 19 6 11.7074 -2.2790 2.1358 20 6 8.8794 -2.8551 1.3340 21 6 4.0603 2.5234 0.0000 22 6 3.3029 3.6799 0.0016 23 7 3.9714 5.0004 0.0028 24 8 5.1876 5.0672 0.0028 25 8 3.3054 6.0202 -0.0009 26 6 1.9223 3.6057 0.0078 27 6 1.1016 4.8696 0.0153 28 8 1.1284 5.4627 -1.2845 29 14 -0.6574 4.4650 0.4770 30 6 1.2932 2.3747 0.0020 31 1 -0.3633 0.5138 -0.8900 32 1 -0.3633 -1.0277 -0.0005 33 1 -0.3634 0.5137 0.8900 34 1 5.9058 0.8512 -0.8929 35 1 5.9073 0.8498 0.8871 36 1 8.1435 -0.3605 -0.0074 37 1 9.6989 -2.9232 -1.6028 38 1 10.1496 -1.5205 -0.5405 39 1 13.6684 -1.8798 3.0007 40 1 11.0355 -1.6226 2.6689 41 1 9.1738 -1.9921 1.9312 42 1 8.3131 -3.5920 1.9036 43 1 5.1386 2.5841 0.0000 44 1 1.5166 5.5681 0.7420 45 1 0.7733 4.8959 -1.9829 46 1 -1.4771 5.7032 0.4885 47 1 -1.2242 3.4891 -0.4880 48 1 0.2146 2.3196 0.0028 There are 74 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 74 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_18339242_4549636.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 09:50:23 Heat of formation + Delta-G solvation = 3.896364 kcal Electronic energy + Delta-G solvation = -37876.740047 eV Core-core repulsion = 32487.549231 eV Total energy + Delta-G solvation = -5389.190816 eV No. of doubly occupied orbitals = 74 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 406.139 amu Computer time = 1.40 seconds Orbital eigenvalues (eV) -45.93118 -43.24913 -42.14381 -41.40335 -40.25030 -39.41004 -39.10867 -37.59328 -37.15210 -35.46674 -34.07264 -32.74294 -32.66562 -32.56117 -30.13148 -29.04042 -27.89079 -27.04745 -26.88979 -25.77794 -24.22197 -23.90349 -23.22834 -22.53474 -21.75048 -20.94835 -20.75397 -19.71132 -19.58602 -18.95177 -18.77101 -18.51659 -18.48263 -18.36259 -17.85974 -17.75597 -17.54322 -17.21487 -17.03713 -16.62049 -16.42177 -16.24345 -16.03100 -15.71987 -15.52941 -15.19961 -14.95137 -14.59018 -14.51903 -14.14811 -13.99533 -13.84297 -13.76206 -13.59460 -13.51542 -13.19309 -12.92508 -12.74754 -12.62168 -12.58470 -12.43129 -12.28377 -12.18105 -12.08333 -11.95018 -11.86730 -11.65299 -11.07432 -10.97015 -10.70019 -10.62751 -10.57516 -10.29832 -9.55726 -5.20027 -1.23745 -0.53191 0.30661 0.42170 0.51011 0.99547 1.09463 1.18350 1.29511 1.31987 1.69271 1.76468 1.85238 2.18225 2.28835 2.88737 2.97911 3.06958 3.14106 3.17030 3.27410 3.35019 3.38043 3.40578 3.50437 3.61512 3.67423 3.73213 3.78201 3.83481 3.84619 3.91082 3.95456 4.13074 4.14883 4.24172 4.28608 4.36275 4.43797 4.46005 4.54179 4.56002 4.57373 4.65605 4.71930 4.78491 4.93456 5.01864 5.26548 5.42082 5.46624 5.89640 6.18296 6.24711 6.77603 6.93258 7.27520 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.014 3.986 2 O -0.284 6.284 3 C 0.170 3.830 4 C 0.110 3.890 5 O -0.265 6.265 6 C 0.031 3.969 7 C 0.520 3.480 8 O -0.507 6.507 9 N -0.716 5.716 10 C 0.127 3.873 11 H 0.123 0.877 12 C -0.132 4.132 13 C -0.034 4.034 14 H 0.114 0.886 15 C 0.027 3.973 16 N -0.361 5.361 17 O 0.100 5.900 18 C -0.054 4.054 19 C -0.234 4.234 20 C -0.140 4.140 21 C -0.118 4.118 22 C -0.024 4.024 23 N 0.032 4.968 24 O -0.175 6.175 25 O -0.128 6.128 26 C -0.039 4.039 27 C -0.083 4.083 28 O -0.504 6.504 29 Si 0.685 3.315 30 C -0.185 4.185 31 H 0.062 0.938 32 H 0.114 0.886 33 H 0.067 0.933 34 H 0.100 0.900 35 H 0.101 0.899 36 H 0.404 0.596 37 H 0.085 0.915 38 H 0.092 0.908 39 H 0.218 0.782 40 H 0.171 0.829 41 H 0.092 0.908 42 H 0.083 0.917 43 H 0.166 0.834 44 H 0.142 0.858 45 H 0.370 0.630 46 H -0.244 1.244 47 H -0.257 1.257 48 H 0.163 0.837 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.274 -0.756 3.552 3.848 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.080 4.080 2 O -0.195 6.195 3 C 0.122 3.878 4 C 0.062 3.938 5 O -0.176 6.176 6 C -0.048 4.048 7 C 0.304 3.696 8 O -0.380 6.380 9 N -0.369 5.369 10 C 0.022 3.978 11 H 0.141 0.859 12 C -0.171 4.171 13 C -0.053 4.053 14 H 0.132 0.868 15 C -0.132 4.132 16 N -0.064 5.064 17 O 0.033 5.967 18 C -0.135 4.135 19 C -0.255 4.255 20 C -0.179 4.179 21 C -0.138 4.138 22 C -0.108 4.108 23 N 0.551 4.449 24 O -0.385 6.385 25 O -0.349 6.349 26 C -0.041 4.041 27 C -0.192 4.192 28 O -0.308 6.308 29 Si 0.585 3.415 30 C -0.205 4.205 31 H 0.080 0.920 32 H 0.133 0.867 33 H 0.085 0.915 34 H 0.118 0.882 35 H 0.119 0.881 36 H 0.239 0.761 37 H 0.103 0.897 38 H 0.110 0.890 39 H 0.234 0.766 40 H 0.188 0.812 41 H 0.111 0.889 42 H 0.102 0.898 43 H 0.184 0.816 44 H 0.160 0.840 45 H 0.217 0.783 46 H -0.168 1.168 47 H -0.182 1.182 48 H 0.180 0.820 Dipole moment (debyes) X Y Z Total from point charges -2.297 -3.006 2.735 4.668 hybrid contribution 0.446 1.638 -0.559 1.788 sum -1.852 -1.367 2.176 3.167 Atomic orbital electron populations 1.23396 0.76868 1.05705 1.02046 1.86342 1.22396 1.24281 1.86513 1.18446 0.89032 0.85884 0.94460 1.17853 0.88396 0.85336 1.02183 1.86341 1.16827 1.26043 1.88430 1.22674 0.80261 0.97224 1.04644 1.19885 0.82695 0.90164 0.76862 1.90808 1.62587 1.37827 1.46768 1.45770 1.05720 1.09505 1.75912 1.22519 0.92850 0.85500 0.96887 0.85891 1.23409 0.94576 1.00163 0.98958 1.20670 0.87045 1.00908 0.96713 0.86821 1.23368 0.95490 0.96635 0.97663 1.73886 0.96496 1.19932 1.16110 1.84875 1.31674 1.42503 1.37621 1.26105 0.96255 0.94636 0.96552 1.22695 0.96039 1.04615 1.02179 1.23563 0.95546 1.01607 0.97210 1.20796 1.02177 0.88963 1.01852 1.20394 0.91950 0.83147 1.15305 1.43376 1.00977 1.02603 0.97942 1.94541 0.95807 1.93717 1.54475 1.94580 1.64493 1.24077 1.51734 1.20006 0.91524 0.96881 0.95739 1.25412 1.09389 0.94014 0.90385 1.86815 1.84639 1.43860 1.15527 0.95252 0.74272 0.82212 0.89746 1.21111 1.01323 0.89713 1.08303 0.91983 0.86741 0.91452 0.88227 0.88150 0.76058 0.89659 0.88998 0.76575 0.81163 0.88911 0.89834 0.81637 0.84043 0.78290 1.16830 1.18205 0.81963 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.01 -0.05 9.81 101.05 0.99 0.94 16 2 O -0.28 -0.09 10.28 -34.24 -0.35 -0.44 16 3 C 0.17 -0.03 6.70 -39.12 -0.26 -0.29 16 4 C 0.11 0.02 6.70 -39.12 -0.26 -0.24 16 5 O -0.26 -0.33 9.46 -47.38 -0.45 -0.78 16 6 C 0.03 -0.07 5.22 36.01 0.19 0.12 16 7 C 0.52 -0.06 7.91 -10.98 -0.09 -0.14 16 8 O -0.51 -2.46 16.10 -14.35 -0.23 -2.69 16 9 N -0.72 2.19 5.35 -53.01 -0.28 1.91 16 10 C 0.13 -0.28 4.24 -67.12 -0.28 -0.57 16 11 H 0.12 -0.07 7.46 -51.93 -0.39 -0.46 16 12 C -0.13 0.36 7.38 -25.92 -0.19 0.17 16 13 C -0.03 0.05 4.29 -90.96 -0.39 -0.34 16 14 H 0.11 -0.14 8.14 -51.93 -0.42 -0.56 16 15 C 0.03 0.01 6.70 -82.10 -0.55 -0.54 16 16 N -0.36 -1.00 12.07 33.42 0.40 -0.60 16 17 O 0.10 0.14 11.20 17.19 0.19 0.33 16 18 C -0.05 0.11 12.30 29.74 0.37 0.48 16 19 C -0.23 0.41 10.28 -39.38 -0.40 0.00 16 20 C -0.14 0.36 7.27 -25.92 -0.19 0.17 16 21 C -0.12 0.06 8.54 -39.46 -0.34 -0.28 16 22 C -0.02 -0.03 6.85 -79.95 -0.55 -0.57 16 23 N 0.03 0.12 4.45 33.96 0.15 0.27 16 24 O -0.18 -0.77 18.44 -29.46 -0.54 -1.31 16 25 O -0.13 -0.62 14.61 -35.99 -0.53 -1.15 16 26 C -0.04 0.02 5.26 -104.61 -0.55 -0.53 16 27 C -0.08 0.03 1.74 36.01 0.06 0.10 16 28 O -0.50 -0.56 11.78 -55.57 -0.65 -1.21 16 29 Si 0.69 -1.69 30.25 -169.99 -5.14 -6.83 16 30 C -0.19 0.33 7.65 -39.46 -0.30 0.03 16 31 H 0.06 -0.28 7.67 -51.93 -0.40 -0.68 16 32 H 0.11 -0.54 8.14 -51.93 -0.42 -0.97 16 33 H 0.07 -0.36 7.66 -51.93 -0.40 -0.76 16 34 H 0.10 -0.47 7.66 -51.93 -0.40 -0.87 16 35 H 0.10 -0.51 7.66 -51.93 -0.40 -0.91 16 36 H 0.40 -2.45 8.73 -40.82 -0.36 -2.81 16 37 H 0.08 -0.21 8.14 -51.92 -0.42 -0.63 16 38 H 0.09 -0.31 8.07 -51.93 -0.42 -0.73 16 39 H 0.22 -1.33 8.06 -52.49 -0.42 -1.75 16 40 H 0.17 -0.72 7.12 -52.48 -0.37 -1.09 16 41 H 0.09 -0.34 6.62 -51.93 -0.34 -0.68 16 42 H 0.08 -0.16 8.14 -51.93 -0.42 -0.58 16 43 H 0.17 -0.42 5.85 -52.48 -0.31 -0.73 16 44 H 0.14 0.04 6.08 -51.93 -0.32 -0.28 16 45 H 0.37 -0.88 8.70 45.56 0.40 -0.48 16 46 H -0.24 -0.23 7.11 56.52 0.40 0.17 16 47 H -0.26 0.51 6.67 56.52 0.38 0.89 16 48 H 0.16 -0.63 3.09 -52.49 -0.16 -0.79 16 LS Contribution 409.61 15.07 6.17 6.17 Total: 0.00 -13.33 409.61 -9.21 -22.54 By element: Atomic # 1 Polarization: -9.50 SS G_CDS: -5.20 Total: -14.69 kcal Atomic # 6 Polarization: 1.24 SS G_CDS: -2.75 Total: -1.51 kcal Atomic # 7 Polarization: 1.31 SS G_CDS: 0.27 Total: 1.58 kcal Atomic # 8 Polarization: -4.69 SS G_CDS: -2.56 Total: -7.25 kcal Atomic # 14 Polarization: -1.69 SS G_CDS: -5.14 Total: -6.83 kcal Total LS contribution 6.17 Total: 6.17 kcal Total: -13.33 -9.21 -22.54 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_18339242_4549636.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 26.435 kcal (2) G-P(sol) polarization free energy of solvation -13.332 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 13.103 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.206 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.539 kcal (6) G-S(sol) free energy of system = (1) + (5) 3.896 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.40 seconds