Wall clock time and date at job start Sun Mar 7 2021 09:50:52 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46500 * 1 3 3 C 1.37643 * 125.67339 * 2 1 4 4 C 1.46670 * 126.22682 * 359.95802 * 3 2 1 5 5 O 1.21688 * 120.00191 * 5.16269 * 4 3 2 6 6 N 1.34772 * 119.99941 * 185.15480 * 4 3 2 7 7 C 1.46497 * 120.00363 * 174.63860 * 6 4 3 8 8 H 1.09003 * 112.84565 * 23.80714 * 7 6 4 9 9 C 1.53782 * 113.61878 * 155.00136 * 7 6 4 10 10 C 1.53783 * 87.17370 * 140.02748 * 9 7 6 11 11 H 1.08997 * 113.61478 * 89.15570 * 10 9 7 12 12 C 1.50700 * 113.61322 * 220.06349 * 10 9 7 13 13 N 1.30168 * 126.80233 * 265.02419 * 12 10 9 14 14 O 1.20920 * 111.60709 * 179.97438 * 13 12 10 15 15 C 1.34044 * 111.56473 * 0.02562 * 14 13 12 16 16 C 1.35448 * 106.44833 * 359.74284 * 15 14 13 17 17 C 1.53776 * 113.69465 * 252.54253 * 7 6 4 18 18 C 1.37884 * 107.54583 * 180.22485 * 3 2 1 19 19 C 1.39885 * 107.09183 * 359.58353 * 18 3 2 20 20 Br 1.89098 * 126.07045 * 180.16302 * 19 18 3 21 21 C 1.35504 * 107.85019 * 0.41701 * 19 18 3 22 22 C 1.50702 * 125.56542 * 179.76194 * 21 19 18 23 23 O 1.42905 * 109.46563 * 209.97619 * 22 21 19 24 24 Si 1.86301 * 109.47439 * 329.97420 * 22 21 19 25 25 H 1.09000 * 109.47237 * 92.11294 * 1 2 3 26 26 H 1.09002 * 109.47356 * 212.10863 * 1 2 3 27 27 H 1.09002 * 109.47406 * 332.11665 * 1 2 3 28 28 H 0.97002 * 120.00469 * 354.64779 * 6 4 3 29 29 H 1.08998 * 113.61791 * 254.61744 * 9 7 6 30 30 H 1.09000 * 113.60930 * 25.43559 * 9 7 6 31 31 H 1.08006 * 126.77473 * 179.97438 * 15 14 13 32 32 H 1.07991 * 128.00963 * 180.23328 * 16 15 14 33 33 H 1.09002 * 113.61631 * 334.55123 * 17 7 6 34 34 H 1.08997 * 113.61701 * 105.36936 * 17 7 6 35 35 H 1.08000 * 126.45363 * 179.73820 * 18 3 2 36 36 H 1.09002 * 109.46957 * 89.97956 * 22 21 19 37 37 H 0.96697 * 114.00288 * 60.00252 * 23 22 21 38 38 H 1.48496 * 109.99903 * 180.02562 * 24 22 21 39 39 H 1.48497 * 109.99904 * 301.32338 * 24 22 21 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 6 2.2677 1.1181 0.0000 4 6 1.8120 2.5123 -0.0009 5 8 0.6253 2.7646 0.0931 6 7 2.7077 3.5139 -0.1056 7 6 2.2467 4.8993 -0.2248 8 1 1.2474 5.0495 0.1838 9 6 3.2738 5.9345 0.2633 10 6 2.8574 6.8010 -0.9370 11 1 2.0254 7.4720 -0.7234 12 6 4.0132 7.4954 -1.6100 13 7 4.4319 8.7075 -1.3866 14 8 5.3817 8.9857 -2.0813 15 6 5.7250 7.9642 -2.8785 16 6 4.8611 6.9574 -2.6054 17 6 2.4329 5.4938 -1.6307 18 6 3.5781 0.6891 -0.0052 19 6 3.5528 -0.7095 0.0014 20 35 5.0609 -1.8502 0.0028 21 6 2.2557 -1.1015 0.0009 22 6 1.7713 -2.5285 0.0017 23 8 0.5135 -2.6049 -0.6722 24 14 3.0123 -3.6061 -0.8756 25 1 -0.3634 -0.0379 -1.0270 26 1 -0.3634 -0.8705 0.5462 27 1 -0.3634 0.9084 0.4806 28 1 3.6576 3.3175 -0.1023 29 1 3.0241 6.3761 1.2281 30 1 4.3047 5.5842 0.2123 31 1 6.5335 7.9462 -3.5944 32 1 4.8265 5.9726 -3.0472 33 1 3.2341 5.0236 -2.2010 34 1 1.5046 5.5781 -2.1957 35 1 4.4582 1.3151 -0.0105 36 1 1.6543 -2.8719 1.0296 37 1 0.5428 -2.3140 -1.5939 38 1 2.5458 -5.0159 -0.8821 39 1 3.2046 -3.1287 -2.2685 There are 58 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 58 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_18339242_5000100.mol2 39 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 09:50:52 Heat of formation + Delta-G solvation = 75.495868 kcal Electronic energy + Delta-G solvation = -26305.160205 eV Core-core repulsion = 22265.974842 eV Total energy + Delta-G solvation = -4039.185363 eV No. of doubly occupied orbitals = 58 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 382.036 amu Computer time = 0.84 seconds Orbital eigenvalues (eV) -45.87140 -42.91610 -41.04312 -39.39010 -37.97838 -35.54511 -34.62431 -33.98152 -32.57632 -32.27089 -31.15061 -27.82681 -27.36410 -26.83917 -26.20777 -24.06314 -23.42179 -22.19850 -21.44784 -21.09803 -20.38578 -18.97534 -18.78343 -18.47037 -18.29250 -17.46948 -17.22588 -16.52866 -16.34942 -16.14946 -15.74804 -15.52911 -15.45102 -15.11440 -14.63588 -14.54469 -14.33122 -14.10948 -13.87879 -13.72932 -13.63127 -13.38813 -13.16892 -12.81375 -12.78919 -12.53257 -12.38342 -12.11010 -11.92320 -11.73433 -11.63483 -11.18884 -10.89012 -10.85069 -10.54251 -10.21653 -9.88019 -9.34715 -4.69072 0.14261 0.35402 0.64356 0.89821 1.20953 1.30742 1.44044 1.56621 1.93214 2.11930 2.25244 2.50200 3.07343 3.14470 3.28426 3.31334 3.52400 3.56046 3.68620 3.78406 3.89565 4.02197 4.08992 4.23406 4.31901 4.34877 4.40403 4.47478 4.58737 4.63821 4.65706 4.68373 4.74776 4.78780 4.90406 4.96830 5.13110 5.19504 5.23080 5.47307 5.58176 5.76922 6.23368 6.39713 7.03477 7.37827 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.066 3.934 2 N -0.390 5.390 3 C -0.058 4.058 4 C 0.593 3.407 5 O -0.577 6.577 6 N -0.690 5.690 7 C 0.128 3.872 8 H 0.106 0.894 9 C -0.120 4.120 10 C -0.038 4.038 11 H 0.104 0.896 12 C 0.021 3.979 13 N -0.406 5.406 14 O 0.078 5.922 15 C -0.048 4.048 16 C -0.239 4.239 17 C -0.129 4.129 18 C -0.089 4.089 19 C -0.191 4.191 20 Br 0.090 6.910 21 C 0.057 3.943 22 C -0.041 4.041 23 O -0.542 6.542 24 Si 0.629 3.371 25 H 0.086 0.914 26 H 0.102 0.898 27 H 0.094 0.906 28 H 0.419 0.581 29 H 0.082 0.918 30 H 0.105 0.895 31 H 0.255 0.745 32 H 0.196 0.804 33 H 0.109 0.891 34 H 0.076 0.924 35 H 0.189 0.811 36 H 0.140 0.860 37 H 0.386 0.614 38 H -0.271 1.271 39 H -0.278 1.278 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 6.070 -0.636 -1.633 6.318 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.074 4.074 2 N -0.062 5.062 3 C -0.171 4.171 4 C 0.381 3.619 5 O -0.458 6.458 6 N -0.341 5.341 7 C 0.023 3.977 8 H 0.124 0.876 9 C -0.159 4.159 10 C -0.058 4.058 11 H 0.122 0.878 12 C -0.138 4.138 13 N -0.113 5.113 14 O 0.014 5.986 15 C -0.128 4.128 16 C -0.260 4.260 17 C -0.168 4.168 18 C -0.116 4.116 19 C -0.276 4.276 20 Br 0.174 6.826 21 C -0.066 4.066 22 C -0.151 4.151 23 O -0.349 6.349 24 Si 0.531 3.469 25 H 0.104 0.896 26 H 0.120 0.880 27 H 0.112 0.888 28 H 0.257 0.743 29 H 0.100 0.900 30 H 0.123 0.877 31 H 0.271 0.729 32 H 0.213 0.787 33 H 0.127 0.873 34 H 0.094 0.906 35 H 0.206 0.794 36 H 0.157 0.843 37 H 0.235 0.765 38 H -0.197 1.197 39 H -0.204 1.204 Dipole moment (debyes) X Y Z Total from point charges 4.944 -0.563 -0.861 5.050 hybrid contribution -1.038 -0.072 -1.238 1.617 sum 3.906 -0.635 -2.099 4.479 Atomic orbital electron populations 1.22468 0.74347 1.05722 1.04868 1.43922 1.07712 1.03903 1.50709 1.20167 0.90377 0.87711 1.18875 1.17011 0.85483 0.83836 0.75582 1.90801 1.17802 1.85052 1.52170 1.45452 1.10130 1.05239 1.73246 1.22413 0.99491 0.78725 0.97091 0.87580 1.23344 1.00243 0.94477 0.97866 1.20712 0.93557 0.94794 0.96750 0.87816 1.23744 1.00285 0.90913 0.98830 1.73874 1.02826 1.18582 1.16009 1.84820 1.35761 1.38600 1.39393 1.26900 1.02421 0.86090 0.97427 1.23050 0.97543 1.03785 1.01626 1.23555 1.03120 0.93339 0.96811 1.21521 0.95597 0.92509 1.01948 1.20693 0.90576 0.95027 1.21331 1.96320 1.32641 1.56335 1.97341 1.21025 0.89717 0.90196 1.05636 1.24710 0.93350 0.92692 1.04392 1.86556 1.29683 1.88864 1.29795 0.92737 0.92365 0.77870 0.83945 0.89583 0.87988 0.88770 0.74258 0.89959 0.87674 0.72868 0.78668 0.87308 0.90572 0.79368 0.84284 0.76518 1.19689 1.20374 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.07 0.05 9.41 127.77 1.20 1.26 16 2 N -0.39 -0.71 3.16 -519.61 -1.64 -2.36 16 3 C -0.06 -0.04 6.88 40.35 0.28 0.24 16 4 C 0.59 1.21 7.77 86.45 0.67 1.88 16 5 O -0.58 -5.33 14.18 -4.31 -0.06 -5.39 16 6 N -0.69 3.27 5.34 -444.03 -2.37 0.90 16 7 C 0.13 -0.50 4.27 45.52 0.19 -0.30 16 8 H 0.11 0.02 7.41 -2.39 -0.02 0.01 16 9 C -0.12 0.64 7.37 31.12 0.23 0.87 16 10 C -0.04 0.09 4.30 -10.95 -0.05 0.05 16 11 H 0.10 -0.09 8.14 -2.39 -0.02 -0.11 16 12 C 0.02 0.02 6.70 43.58 0.29 0.31 16 13 N -0.41 -2.64 12.07 -49.57 -0.60 -3.23 16 14 O 0.08 0.24 11.20 71.60 0.80 1.05 16 15 C -0.05 0.25 12.30 67.17 0.83 1.08 16 16 C -0.24 1.12 10.28 22.40 0.23 1.35 16 17 C -0.13 0.67 7.28 31.18 0.23 0.90 16 18 C -0.09 0.32 10.34 22.58 0.23 0.55 16 19 C -0.19 0.25 6.16 22.04 0.14 0.39 16 20 Br 0.09 -0.33 28.25 -20.37 -0.58 -0.91 16 21 C 0.06 0.04 6.15 41.35 0.25 0.29 16 22 C -0.04 0.00 2.89 71.24 0.21 0.20 16 23 O -0.54 -0.50 10.43 -148.98 -1.55 -2.06 16 24 Si 0.63 1.15 27.11 68.60 1.86 3.01 16 25 H 0.09 -0.08 8.14 -2.39 -0.02 -0.10 16 26 H 0.10 -0.03 6.94 -2.39 -0.02 -0.04 16 27 H 0.09 0.38 6.10 -2.39 -0.01 0.37 16 28 H 0.42 -4.50 7.63 -92.71 -0.71 -5.21 16 29 H 0.08 -0.35 8.14 -2.39 -0.02 -0.37 16 30 H 0.10 -0.82 8.07 -2.39 -0.02 -0.84 16 31 H 0.26 -3.73 8.06 -2.91 -0.02 -3.76 16 32 H 0.20 -2.10 7.12 -2.91 -0.02 -2.12 16 33 H 0.11 -0.92 6.63 -2.39 -0.02 -0.93 16 34 H 0.08 -0.26 8.14 -2.39 -0.02 -0.28 16 35 H 0.19 -2.04 7.45 -2.91 -0.02 -2.06 16 36 H 0.14 -0.28 7.96 -2.39 -0.02 -0.30 16 37 H 0.39 -1.28 8.70 -74.06 -0.64 -1.93 16 38 H -0.27 -2.23 7.11 99.48 0.71 -1.52 16 39 H -0.28 -1.85 7.11 99.48 0.71 -1.14 16 Total: 0.00 -20.89 342.68 0.61 -20.28 By element: Atomic # 1 Polarization: -20.16 SS G_CDS: -0.18 Total: -20.34 kcal Atomic # 6 Polarization: 4.12 SS G_CDS: 4.93 Total: 9.05 kcal Atomic # 7 Polarization: -0.08 SS G_CDS: -4.61 Total: -4.69 kcal Atomic # 8 Polarization: -5.59 SS G_CDS: -0.81 Total: -6.40 kcal Atomic # 14 Polarization: 1.15 SS G_CDS: 1.86 Total: 3.01 kcal Atomic # 35 Polarization: -0.33 SS G_CDS: -0.58 Total: -0.91 kcal Total: -20.89 0.61 -20.28 kcal The number of atoms in the molecule is 39 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_18339242_5000100.mol2 39 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 95.780 kcal (2) G-P(sol) polarization free energy of solvation -20.891 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 74.889 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.606 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.284 kcal (6) G-S(sol) free energy of system = (1) + (5) 75.496 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.84 seconds