Wall clock time and date at job start Sun Mar 7 2021 09:51:24 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42905 * 1 3 3 Si 1.86298 * 109.47434 * 2 1 4 4 C 1.50704 * 109.47012 * 120.00478 * 2 1 3 5 5 C 1.38234 * 119.93404 * 245.01623 * 4 2 1 6 6 C 1.38200 * 120.07312 * 179.76642 * 5 4 2 7 7 C 1.38670 * 119.95524 * 0.46516 * 6 5 4 8 8 O 1.35925 * 120.05981 * 179.78893 * 7 6 5 9 9 C 1.42903 * 116.99722 * 359.72423 * 8 7 6 10 10 C 1.53000 * 109.46726 * 179.97438 * 9 8 7 11 11 N 1.46499 * 109.46840 * 179.97438 * 10 9 8 12 12 C 1.34818 * 126.59197 * 125.00117 * 11 10 9 13 13 C 1.36599 * 106.83805 * 180.02562 * 12 11 10 14 14 C 1.47520 * 125.76967 * 180.02562 * 13 12 11 15 15 O 1.21598 * 120.00232 * 359.97438 * 14 13 12 16 16 N 1.34772 * 120.00287 * 180.02562 * 14 13 12 17 17 C 1.46502 * 120.00615 * 179.97438 * 16 14 13 18 18 H 1.09006 * 112.84551 * 25.33177 * 17 16 14 19 19 C 1.53778 * 113.61538 * 156.52205 * 17 16 14 20 20 C 1.53792 * 87.07782 * 139.98421 * 19 17 16 21 21 H 1.09004 * 113.61082 * 89.11529 * 20 19 17 22 22 C 1.50701 * 113.61263 * 219.93515 * 20 19 17 23 23 N 1.30170 * 126.80454 * 264.68663 * 22 20 19 24 24 O 1.20911 * 111.60922 * 179.79720 * 23 22 20 25 25 C 1.34042 * 111.56341 * 0.48594 * 24 23 22 26 26 C 1.35442 * 106.44698 * 359.70651 * 25 24 23 27 27 C 1.53778 * 113.61414 * 254.13790 * 17 16 14 28 28 N 1.34398 * 108.46219 * 0.02562 * 13 12 11 29 29 N 1.28767 * 109.51642 * 359.70839 * 28 13 12 30 30 C 1.38861 * 119.87901 * 359.51320 * 7 6 5 31 31 Cl 1.73603 * 120.03650 * 180.27326 * 30 7 6 32 32 C 1.38207 * 119.92328 * 0.25422 * 30 7 6 33 33 H 0.96703 * 113.99507 * 299.99957 * 1 2 3 34 34 H 1.09008 * 109.46606 * 240.00042 * 2 1 3 35 35 H 1.48500 * 109.99990 * 300.00305 * 3 2 1 36 36 H 1.48499 * 109.99777 * 61.32124 * 3 2 1 37 37 H 1.07991 * 119.96548 * 0.02562 * 5 4 2 38 38 H 1.07994 * 120.02056 * 180.25738 * 6 5 4 39 39 H 1.09001 * 109.46938 * 59.99959 * 9 8 7 40 40 H 1.08992 * 109.47388 * 299.99951 * 9 8 7 41 41 H 1.09002 * 109.47398 * 300.00244 * 10 9 8 42 42 H 1.09001 * 109.47194 * 60.00425 * 10 9 8 43 43 H 1.07997 * 126.57877 * 0.02610 * 12 11 10 44 44 H 0.97001 * 119.99603 * 359.97438 * 16 14 13 45 45 H 1.08996 * 113.61355 * 254.52525 * 19 17 16 46 46 H 1.08996 * 113.61750 * 25.43607 * 19 17 16 47 47 H 1.08000 * 126.78040 * 179.73314 * 25 24 23 48 48 H 1.08006 * 128.00764 * 180.02562 * 26 25 24 49 49 H 1.08998 * 113.61471 * 334.55687 * 27 17 16 50 50 H 1.08992 * 113.62031 * 105.46987 * 27 17 16 51 51 H 1.07999 * 119.97655 * 179.97438 * 32 30 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0501 1.7564 0.0000 4 6 1.9314 -0.7105 1.2304 5 6 2.6383 -0.0111 2.1906 6 6 3.0961 -0.6588 3.3223 7 6 2.8543 -2.0138 3.4902 8 8 3.3073 -2.6539 4.6005 9 6 4.0309 -1.8700 5.5513 10 6 4.4560 -2.7556 6.7243 11 7 5.1983 -1.9522 7.6988 12 6 4.9198 -1.8214 9.0114 13 6 5.8634 -0.9837 9.5345 14 6 5.9508 -0.5561 10.9437 15 8 5.1349 -0.9556 11.7520 16 7 6.9342 0.2781 11.3351 17 6 7.0207 0.7032 12.7345 18 1 6.5632 -0.0083 13.4220 19 6 8.4307 1.1485 13.1570 20 6 7.7509 2.2758 13.9521 21 1 7.4924 1.9954 14.9732 22 6 8.4781 3.5934 13.8733 23 7 9.3429 4.0592 14.7275 24 8 9.7604 5.1433 14.3923 25 6 9.2024 5.5526 13.2443 26 6 8.3518 4.5713 12.8600 27 6 6.5750 2.1567 12.9654 28 7 6.6988 -0.6148 8.5485 29 7 6.3377 -1.1750 7.4467 30 6 2.1435 -2.7145 2.5247 31 17 1.8323 -4.4095 2.7342 32 6 1.6838 -2.0608 1.3972 33 1 -0.3933 0.4417 0.7651 34 1 1.7923 -0.5139 -0.8901 35 1 1.5616 2.4679 -1.2085 36 1 1.5881 2.4585 1.2243 37 1 2.8295 1.0435 2.0582 38 1 3.6447 -0.1106 4.0739 39 1 3.3948 -1.0639 5.9169 40 1 4.9157 -1.4472 5.0755 41 1 3.5709 -3.1781 7.2000 42 1 5.0920 -3.5619 6.3590 43 1 4.1067 -2.2892 9.5464 44 1 7.5849 0.5971 10.6903 45 1 8.9481 0.4226 13.7842 46 1 9.0423 1.5059 12.3286 47 1 9.3938 6.4815 12.7275 48 1 7.7228 4.5422 11.9825 49 1 6.6785 2.7903 12.0845 50 1 5.5968 2.2437 13.4381 51 1 1.1313 -2.6050 0.6455 There are 78 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 78 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_18339242_7143556.mol2 51 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 09:51:24 Heat of formation + Delta-G solvation = 117.476881 kcal Electronic energy + Delta-G solvation = -38573.683750 eV Core-core repulsion = 33087.285598 eV Total energy + Delta-G solvation = -5486.398152 eV No. of doubly occupied orbitals = 78 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 446.124 amu Computer time = 2.07 seconds Orbital eigenvalues (eV) -45.87592 -43.35108 -41.52149 -41.08063 -39.51574 -39.36798 -37.80331 -37.17756 -36.16145 -35.32310 -33.86624 -32.56627 -32.53728 -32.03678 -31.91546 -30.64646 -27.23901 -26.83257 -26.68419 -25.75875 -24.81549 -24.00761 -23.83149 -22.83877 -22.49409 -22.15874 -21.43181 -20.78285 -19.80631 -18.90086 -18.78535 -18.54697 -18.45826 -17.71135 -17.44862 -17.42441 -17.23838 -16.96871 -16.69607 -16.38255 -16.21364 -15.95688 -15.90265 -15.67994 -15.56584 -15.25056 -15.03819 -14.90836 -14.80001 -14.57270 -14.33197 -13.84255 -13.80047 -13.65880 -13.64952 -13.48703 -13.38452 -13.17976 -12.81678 -12.59360 -12.58219 -12.37657 -12.33585 -12.28116 -12.07769 -11.97775 -11.92839 -11.71922 -11.64791 -11.47838 -11.26805 -10.86036 -10.65640 -10.54533 -10.50147 -10.06969 -10.03207 -9.36047 -4.92534 -0.03666 0.02567 0.06912 0.53510 0.63865 0.72499 1.05919 1.30056 1.32725 1.57867 1.95379 1.97727 2.05348 2.16053 2.36961 2.49235 3.06753 3.17242 3.23416 3.32760 3.38930 3.48167 3.56070 3.57786 3.65615 3.72111 3.72973 3.76939 3.88691 3.90497 3.98406 4.02600 4.05365 4.09422 4.28693 4.31471 4.41848 4.44080 4.49952 4.57618 4.60623 4.62895 4.68410 4.71062 4.75148 4.78395 4.83003 4.91985 4.97961 4.98070 5.14274 5.20226 5.20812 5.25583 5.45114 5.48684 6.00983 6.35880 6.47714 6.80621 7.07589 7.37192 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.548 6.548 2 C -0.079 4.079 3 Si 0.768 3.232 4 C -0.140 4.140 5 C -0.070 4.070 6 C -0.188 4.188 7 C 0.138 3.862 8 O -0.306 6.306 9 C 0.046 3.954 10 C 0.123 3.877 11 N -0.350 5.350 12 C 0.118 3.882 13 C -0.123 4.123 14 C 0.608 3.392 15 O -0.566 6.566 16 N -0.696 5.696 17 C 0.126 3.874 18 H 0.112 0.888 19 C -0.123 4.123 20 C -0.037 4.037 21 H 0.108 0.892 22 C 0.020 3.980 23 N -0.405 5.405 24 O 0.078 5.922 25 C -0.047 4.047 26 C -0.241 4.241 27 C -0.129 4.129 28 N -0.214 5.214 29 N -0.081 5.081 30 C -0.082 4.082 31 Cl -0.063 7.063 32 C -0.053 4.053 33 H 0.387 0.613 34 H 0.127 0.873 35 H -0.305 1.305 36 H -0.276 1.276 37 H 0.156 0.844 38 H 0.160 0.840 39 H 0.083 0.917 40 H 0.085 0.915 41 H 0.148 0.852 42 H 0.122 0.878 43 H 0.236 0.764 44 H 0.416 0.584 45 H 0.084 0.916 46 H 0.097 0.903 47 H 0.256 0.744 48 H 0.193 0.807 49 H 0.103 0.897 50 H 0.080 0.920 51 H 0.143 0.857 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.460 2.925 -3.445 4.542 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.356 6.356 2 C -0.188 4.188 3 Si 0.673 3.327 4 C -0.141 4.141 5 C -0.088 4.088 6 C -0.207 4.207 7 C 0.091 3.909 8 O -0.218 6.218 9 C -0.030 4.030 10 C 0.003 3.997 11 N -0.136 5.136 12 C -0.039 4.039 13 C -0.263 4.263 14 C 0.393 3.607 15 O -0.444 6.444 16 N -0.346 5.346 17 C 0.021 3.979 18 H 0.130 0.870 19 C -0.162 4.162 20 C -0.057 4.057 21 H 0.126 0.874 22 C -0.138 4.138 23 N -0.111 5.111 24 O 0.015 5.985 25 C -0.128 4.128 26 C -0.262 4.262 27 C -0.168 4.168 28 N -0.088 5.088 29 N -0.061 5.061 30 C -0.109 4.109 31 Cl -0.034 7.034 32 C -0.071 4.071 33 H 0.236 0.764 34 H 0.144 0.856 35 H -0.233 1.233 36 H -0.203 1.203 37 H 0.173 0.827 38 H 0.178 0.822 39 H 0.101 0.899 40 H 0.103 0.897 41 H 0.166 0.834 42 H 0.140 0.860 43 H 0.253 0.747 44 H 0.253 0.747 45 H 0.103 0.897 46 H 0.116 0.884 47 H 0.272 0.728 48 H 0.211 0.789 49 H 0.121 0.879 50 H 0.099 0.901 51 H 0.161 0.839 Dipole moment (debyes) X Y Z Total from point charges 1.233 2.782 -3.278 4.473 hybrid contribution -1.935 -0.345 0.172 1.973 sum -0.702 2.436 -3.107 4.010 Atomic orbital electron populations 1.86599 1.18478 1.80353 1.50219 1.25213 0.83453 1.11823 0.98290 0.94091 0.90197 0.71785 0.76640 1.20202 1.01957 0.93706 0.98239 1.21199 0.94722 1.00770 0.92067 1.21411 1.05752 0.92260 1.01284 1.18691 0.94388 0.91233 0.86554 1.86004 1.68903 1.37990 1.28952 1.22988 0.97159 0.94060 0.88786 1.21910 0.98377 0.91754 0.87701 1.50335 1.21171 1.34109 1.07953 1.23909 0.99916 0.95979 0.84123 1.21461 1.00284 1.08925 0.95586 1.16895 0.81051 0.77970 0.84755 1.90825 1.42082 1.57916 1.53576 1.45702 1.30433 1.47284 1.11138 1.22475 0.97286 0.95765 0.82387 0.86981 1.23338 0.96002 0.96697 1.00151 1.20746 0.95973 0.88245 1.00748 0.87395 1.23761 0.97670 0.99581 0.92800 1.73864 1.15622 0.97387 1.24236 1.84812 1.52681 1.25836 1.35188 1.26882 0.95225 1.02867 0.87791 1.23043 1.05557 0.94020 1.03581 1.23535 0.97828 0.96275 0.99182 1.74619 1.21257 1.16076 0.96881 1.81992 0.99284 1.08205 1.16630 1.20366 1.06527 0.86594 0.97423 1.98387 1.94629 1.13107 1.97269 1.20880 0.96943 0.94209 0.95110 0.76404 0.85554 1.23340 1.20279 0.82720 0.82236 0.89884 0.89705 0.83411 0.85960 0.74733 0.74662 0.89729 0.88419 0.72816 0.78942 0.87878 0.90083 0.83909 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.55 -0.08 12.83 -148.98 -1.91 -1.99 16 2 C -0.08 0.28 2.80 71.24 0.20 0.48 16 3 Si 0.77 -3.83 29.88 68.60 2.05 -1.78 16 4 C -0.14 0.43 5.35 -19.85 -0.11 0.32 16 5 C -0.07 0.37 8.66 22.26 0.19 0.56 16 6 C -0.19 0.91 9.04 22.36 0.20 1.12 16 7 C 0.14 -0.19 6.68 22.52 0.15 -0.03 16 8 O -0.31 0.97 9.60 -92.71 -0.89 0.08 16 9 C 0.05 -0.38 4.95 71.98 0.36 -0.03 16 10 C 0.12 -1.29 6.91 86.38 0.60 -0.69 16 11 N -0.35 1.79 3.69 -347.09 -1.28 0.51 16 12 C 0.12 -0.54 11.27 83.85 0.95 0.40 16 13 C -0.12 -0.09 6.99 40.82 0.29 0.19 16 14 C 0.61 1.80 7.82 86.69 0.68 2.47 16 15 O -0.57 -4.77 16.48 -4.02 -0.07 -4.84 16 16 N -0.70 0.74 5.36 -443.21 -2.37 -1.63 16 17 C 0.13 -0.23 4.21 45.52 0.19 -0.04 16 18 H 0.11 0.07 7.50 -2.38 -0.02 0.06 16 19 C -0.12 0.35 7.38 31.12 0.23 0.58 16 20 C -0.04 0.03 4.29 -10.95 -0.05 -0.01 16 21 H 0.11 -0.01 8.14 -2.38 -0.02 -0.03 16 22 C 0.02 0.05 6.70 43.58 0.29 0.34 16 23 N -0.40 -3.11 12.07 -49.57 -0.60 -3.70 16 24 O 0.08 0.34 11.20 71.62 0.80 1.14 16 25 C -0.05 0.18 12.30 67.17 0.83 1.00 16 26 C -0.24 0.66 10.28 22.40 0.23 0.89 16 27 C -0.13 0.43 7.29 31.18 0.23 0.65 16 28 N -0.21 -0.54 12.04 -50.00 -0.60 -1.14 16 29 N -0.08 -0.09 13.65 37.02 0.51 0.41 16 30 C -0.08 -0.09 6.33 22.41 0.14 0.06 16 31 Cl -0.06 -0.18 28.51 -2.72 -0.08 -0.25 16 32 C -0.05 0.02 9.46 22.27 0.21 0.23 16 33 H 0.39 -2.14 8.70 -74.05 -0.64 -2.79 16 34 H 0.13 -0.61 7.96 -2.38 -0.02 -0.63 16 35 H -0.31 -1.10 7.11 99.48 0.71 -0.40 16 36 H -0.28 0.60 7.00 99.48 0.70 1.30 16 37 H 0.16 -1.45 4.83 -2.92 -0.01 -1.47 16 38 H 0.16 -1.45 6.30 -2.91 -0.02 -1.47 16 39 H 0.08 -0.81 7.65 -2.39 -0.02 -0.83 16 40 H 0.08 -0.66 7.67 -2.39 -0.02 -0.67 16 41 H 0.15 -2.29 8.08 -2.39 -0.02 -2.31 16 42 H 0.12 -1.36 8.14 -2.39 -0.02 -1.38 16 43 H 0.24 -2.58 8.06 -2.91 -0.02 -2.60 16 44 H 0.42 -1.47 8.40 -92.71 -0.78 -2.24 16 45 H 0.08 -0.22 8.14 -2.39 -0.02 -0.24 16 46 H 0.10 -0.37 8.06 -2.39 -0.02 -0.39 16 47 H 0.26 -3.41 8.06 -2.91 -0.02 -3.43 16 48 H 0.19 -1.58 7.13 -2.91 -0.02 -1.60 16 49 H 0.10 -0.56 6.64 -2.39 -0.02 -0.58 16 50 H 0.08 -0.21 8.14 -2.39 -0.02 -0.22 16 51 H 0.14 -0.09 8.06 -2.91 -0.02 -0.11 16 Total: 0.00 -27.76 453.80 1.01 -26.75 By element: Atomic # 1 Polarization: -21.68 SS G_CDS: -0.35 Total: -22.03 kcal Atomic # 6 Polarization: 2.69 SS G_CDS: 5.80 Total: 8.50 kcal Atomic # 7 Polarization: -1.21 SS G_CDS: -4.35 Total: -5.56 kcal Atomic # 8 Polarization: -3.55 SS G_CDS: -2.07 Total: -5.61 kcal Atomic # 14 Polarization: -3.83 SS G_CDS: 2.05 Total: -1.78 kcal Atomic # 17 Polarization: -0.18 SS G_CDS: -0.08 Total: -0.25 kcal Total: -27.76 1.01 -26.75 kcal The number of atoms in the molecule is 51 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_18339242_7143556.mol2 51 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 144.223 kcal (2) G-P(sol) polarization free energy of solvation -27.757 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 116.467 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.010 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -26.747 kcal (6) G-S(sol) free energy of system = (1) + (5) 117.477 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 2.07 seconds