Wall clock time and date at job start Sun Mar 7 2021 08:58:59 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52997 * 1 3 3 O 1.42899 * 109.47118 * 2 1 4 4 C 1.35907 * 117.00004 * 85.11767 * 3 2 1 5 5 C 1.38725 * 120.05177 * 354.79108 * 4 3 2 6 6 C 1.38146 * 119.94388 * 180.02562 * 5 4 3 7 7 C 1.38270 * 120.05272 * 359.97438 * 6 5 4 8 8 C 1.50698 * 119.94445 * 180.02562 * 7 6 5 9 9 O 1.42900 * 109.47298 * 65.00043 * 8 7 6 10 10 Si 1.86299 * 109.47290 * 185.00079 * 8 7 6 11 11 C 1.38261 * 120.11110 * 0.29848 * 7 6 5 12 12 C 1.38145 * 120.05570 * 359.44627 * 11 7 6 13 13 C 1.50698 * 109.46956 * 240.00257 * 2 1 3 14 14 O 1.21285 * 120.00162 * 120.00160 * 13 2 1 15 15 N 1.34776 * 120.00471 * 299.99628 * 13 2 1 16 16 C 1.46498 * 120.00602 * 185.00703 * 15 13 2 17 17 C 1.53007 * 112.84545 * 66.00520 * 16 15 13 18 18 O 1.42904 * 109.47235 * 55.37679 * 17 16 15 19 19 C 1.53777 * 113.61538 * 197.30842 * 16 15 13 20 20 C 1.53785 * 87.07787 * 89.11928 * 19 16 15 21 21 H 1.09005 * 113.61324 * 139.97932 * 20 19 16 22 22 O 1.42897 * 113.69150 * 270.87301 * 20 19 16 23 23 C 1.53771 * 113.61592 * 294.81233 * 16 15 13 24 24 H 1.09002 * 109.47378 * 59.99872 * 1 2 3 25 25 H 1.08999 * 109.47048 * 180.02562 * 1 2 3 26 26 H 1.08997 * 109.46762 * 299.99518 * 1 2 3 27 27 H 1.09002 * 109.47378 * 120.00128 * 2 1 3 28 28 H 1.07998 * 120.03393 * 0.04078 * 5 4 3 29 29 H 1.07997 * 119.97858 * 180.02562 * 6 5 4 30 30 H 1.09001 * 109.47378 * 305.00296 * 8 7 6 31 31 H 0.96702 * 114.00138 * 59.99370 * 9 8 7 32 32 H 1.48498 * 109.99798 * 58.67971 * 10 8 7 33 33 H 1.48499 * 110.00101 * 179.97438 * 10 8 7 34 34 H 1.08003 * 119.97219 * 179.70430 * 11 7 6 35 35 H 1.07997 * 120.02930 * 180.29619 * 12 11 7 36 36 H 0.97003 * 119.99470 * 5.00617 * 15 13 2 37 37 H 1.08997 * 109.46793 * 175.37522 * 17 16 15 38 38 H 1.08997 * 109.47133 * 295.37478 * 17 16 15 39 39 H 0.96696 * 113.99676 * 180.02562 * 18 17 16 40 40 H 1.08998 * 113.61410 * 203.66460 * 19 16 15 41 41 H 1.09003 * 113.61823 * 334.57189 * 19 16 15 42 42 H 0.96708 * 113.99822 * 277.53765 * 22 20 19 43 43 H 1.09008 * 113.61677 * 25.42683 * 23 16 15 44 44 H 1.09004 * 113.61871 * 156.33160 * 23 16 15 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 8 2.0063 1.3473 0.0000 4 6 2.1148 1.9633 1.2065 5 6 1.6691 1.3253 2.3549 6 6 1.7800 1.9538 3.5801 7 6 2.3351 3.2175 3.6624 8 6 2.4554 3.9006 5.0003 9 8 3.3612 3.1692 5.8289 10 14 3.0967 5.6329 4.7577 11 6 2.7749 3.8578 2.5186 12 6 2.6710 3.2314 1.2917 13 6 2.0323 -0.7103 -1.2305 14 8 2.7296 -0.1209 -2.0288 15 7 1.7068 -2.0007 -1.4439 16 6 2.2829 -2.7233 -2.5806 17 6 3.7956 -2.9171 -2.4563 18 8 4.0922 -3.5698 -1.2202 19 6 1.5227 -4.0103 -2.9417 20 6 0.6519 -3.1430 -3.8660 21 1 0.4127 -3.6213 -4.8159 22 8 -0.4953 -2.5879 -3.2197 23 6 1.8426 -2.1732 -3.9474 24 1 -0.3634 0.5139 -0.8900 25 1 -0.3633 -1.0277 0.0005 26 1 -0.3633 0.5138 0.8900 27 1 1.8934 -0.5139 0.8900 28 1 1.2361 0.3380 2.2913 29 1 1.4336 1.4575 4.4745 30 1 1.4764 3.9392 5.4779 31 1 4.2541 3.0945 5.4653 32 1 2.1799 6.3943 3.8717 33 1 3.2192 6.3175 6.0697 34 1 3.2038 4.8468 2.5848 35 1 3.0190 3.7299 0.3991 36 1 1.0909 -2.4510 -0.8447 37 1 4.1527 -3.5285 -3.2849 38 1 4.2896 -1.9458 -2.4821 39 1 5.0354 -3.7251 -1.0739 40 1 2.1306 -4.7416 -3.4742 41 1 0.9745 -4.4431 -2.1048 42 1 -1.2475 -3.1932 -3.1655 43 1 1.5526 -1.1227 -3.9224 44 1 2.5380 -2.4022 -4.7549 There are 60 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 60 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_18341542_10157680.mol2 44 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 08:58:59 Heat of formation + Delta-G solvation = -138.762354 kcal Electronic energy + Delta-G solvation = -28216.530636 eV Core-core repulsion = 24102.274442 eV Total energy + Delta-G solvation = -4114.256194 eV No. of doubly occupied orbitals = 60 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 324.150 amu Computer time = 0.97 seconds Orbital eigenvalues (eV) -42.06845 -41.32178 -39.86873 -38.83306 -37.55556 -37.14598 -35.92372 -34.49567 -32.77294 -32.05677 -31.34560 -28.63780 -26.95036 -26.72449 -25.61941 -24.27057 -23.34360 -22.43457 -21.46422 -20.40224 -19.47596 -18.79221 -18.32091 -18.21021 -18.00043 -17.08127 -16.90980 -16.76244 -16.43889 -16.30796 -15.96898 -15.79571 -15.56340 -15.37323 -14.97540 -14.89437 -14.73103 -14.34547 -14.24919 -13.80207 -13.70154 -13.45830 -13.39408 -13.31459 -13.16028 -12.93107 -12.71132 -12.18914 -12.17547 -12.14105 -12.07676 -11.71098 -11.42501 -11.14282 -10.94750 -10.65583 -10.41231 -10.07042 -10.02451 -9.24850 -4.99618 0.22324 0.29868 1.32952 1.43474 1.48596 1.64048 1.96227 2.45360 2.62750 3.00166 3.13147 3.40947 3.51135 3.56024 3.62024 3.64016 3.71962 3.77356 3.81665 3.84321 3.90463 4.17318 4.24544 4.32481 4.39879 4.41452 4.49658 4.54387 4.58544 4.61138 4.64948 4.65948 4.82466 4.85975 4.96660 4.99594 5.03863 5.04884 5.16085 5.26890 5.45708 5.52411 5.66026 6.24558 6.45721 6.76093 6.78323 6.90606 7.11845 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.167 4.167 2 C 0.067 3.933 3 O -0.311 6.311 4 C 0.119 3.881 5 C -0.210 4.210 6 C -0.057 4.057 7 C -0.161 4.161 8 C -0.065 4.065 9 O -0.556 6.556 10 Si 0.768 3.232 11 C -0.074 4.074 12 C -0.159 4.159 13 C 0.521 3.479 14 O -0.564 6.564 15 N -0.673 5.673 16 C 0.149 3.851 17 C 0.075 3.925 18 O -0.580 6.580 19 C -0.146 4.146 20 C 0.085 3.915 21 H 0.093 0.907 22 O -0.565 6.565 23 C -0.141 4.141 24 H 0.058 0.942 25 H 0.104 0.896 26 H 0.083 0.917 27 H 0.119 0.881 28 H 0.149 0.851 29 H 0.138 0.862 30 H 0.108 0.892 31 H 0.395 0.605 32 H -0.288 1.288 33 H -0.299 1.299 34 H 0.152 0.848 35 H 0.136 0.864 36 H 0.414 0.586 37 H 0.079 0.921 38 H 0.031 0.969 39 H 0.394 0.606 40 H 0.121 0.879 41 H 0.090 0.910 42 H 0.398 0.602 43 H 0.053 0.947 44 H 0.118 0.882 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.340 -6.838 -0.911 6.906 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.224 4.224 2 C 0.007 3.993 3 O -0.224 6.224 4 C 0.074 3.926 5 C -0.228 4.228 6 C -0.075 4.075 7 C -0.162 4.162 8 C -0.175 4.175 9 O -0.364 6.364 10 Si 0.674 3.326 11 C -0.091 4.091 12 C -0.178 4.178 13 C 0.307 3.693 14 O -0.442 6.442 15 N -0.325 5.325 16 C 0.062 3.938 17 C -0.004 4.004 18 O -0.388 6.388 19 C -0.184 4.184 20 C 0.026 3.974 21 H 0.110 0.890 22 O -0.373 6.373 23 C -0.180 4.180 24 H 0.077 0.923 25 H 0.123 0.877 26 H 0.102 0.898 27 H 0.136 0.864 28 H 0.167 0.833 29 H 0.156 0.844 30 H 0.125 0.875 31 H 0.245 0.755 32 H -0.215 1.215 33 H -0.227 1.227 34 H 0.169 0.831 35 H 0.154 0.846 36 H 0.251 0.749 37 H 0.097 0.903 38 H 0.049 0.951 39 H 0.244 0.756 40 H 0.139 0.861 41 H 0.108 0.892 42 H 0.248 0.752 43 H 0.072 0.928 44 H 0.136 0.864 Dipole moment (debyes) X Y Z Total from point charges -0.728 -5.024 -1.085 5.191 hybrid contribution -0.491 -0.834 0.177 0.984 sum -1.218 -5.858 -0.908 6.052 Atomic orbital electron populations 1.22303 0.90792 1.05330 1.04018 1.22350 0.96974 0.82161 0.97803 1.86180 1.81424 1.26856 1.27934 1.19305 0.95853 0.93276 0.84210 1.21497 1.06760 1.02477 0.92069 1.20988 0.95397 0.93918 0.97210 1.20348 1.03609 0.96671 0.95528 1.25035 0.97042 1.06064 0.89377 1.86459 1.25251 1.77214 1.47447 0.93789 0.88307 0.72465 0.77997 1.20978 0.97714 0.99531 0.90891 1.20599 1.03946 0.93821 0.99386 1.20358 0.79881 0.82316 0.86777 1.90704 1.39462 1.66728 1.47339 1.45139 1.47644 1.10087 1.29679 1.21408 0.91467 0.94391 0.86518 1.22456 0.94705 0.96026 0.87236 1.86393 1.31705 1.81212 1.39476 1.23903 0.98558 0.94996 1.00958 1.22699 0.85600 0.93581 0.95562 0.88967 1.86469 1.24820 1.44896 1.81157 1.23466 0.97623 1.00013 0.96855 0.92332 0.87741 0.89807 0.86378 0.83328 0.84374 0.87475 0.75538 1.21479 1.22677 0.83118 0.84564 0.74862 0.90286 0.95082 0.75612 0.86116 0.89157 0.75153 0.92778 0.86355 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.17 0.21 9.07 71.98 0.65 0.87 16 2 C 0.07 0.22 2.65 29.85 0.08 0.30 16 3 O -0.31 -2.98 9.33 -73.46 -0.69 -3.67 16 4 C 0.12 0.74 6.60 22.50 0.15 0.89 16 5 C -0.21 -0.44 8.25 22.36 0.18 -0.25 16 6 C -0.06 -0.09 9.68 22.26 0.22 0.12 16 7 C -0.16 -0.23 5.35 -19.85 -0.11 -0.33 16 8 C -0.06 -0.01 2.80 71.24 0.20 0.19 16 9 O -0.56 -0.40 12.83 -148.98 -1.91 -2.31 16 10 Si 0.77 -0.75 29.80 68.60 2.04 1.29 16 11 C -0.07 -0.10 8.66 22.25 0.19 0.09 16 12 C -0.16 -0.79 9.99 22.36 0.22 -0.57 16 13 C 0.52 4.03 6.79 87.66 0.60 4.62 16 14 O -0.56 -9.43 14.40 15.99 0.23 -9.20 16 15 N -0.67 -1.01 4.46 -420.55 -1.88 -2.88 16 16 C 0.15 0.09 0.75 4.13 0.00 0.09 16 17 C 0.07 0.09 6.27 71.98 0.45 0.54 16 18 O -0.58 -0.37 13.54 -148.98 -2.02 -2.38 16 19 C -0.15 0.81 7.21 31.12 0.22 1.04 16 20 C 0.08 -0.32 5.27 31.12 0.16 -0.16 16 21 H 0.09 -0.68 8.14 -2.38 -0.02 -0.70 16 22 O -0.57 1.46 13.09 -148.98 -1.95 -0.49 16 23 C -0.14 -0.24 6.78 31.12 0.21 -0.03 16 24 H 0.06 0.18 8.14 -2.39 -0.02 0.16 16 25 H 0.10 -0.69 7.46 -2.39 -0.02 -0.71 16 26 H 0.08 -0.22 6.95 -2.39 -0.02 -0.24 16 27 H 0.12 -0.14 6.29 -2.39 -0.02 -0.15 16 28 H 0.15 -0.38 5.45 -2.91 -0.02 -0.39 16 29 H 0.14 -0.08 8.06 -2.91 -0.02 -0.11 16 30 H 0.11 0.11 7.96 -2.39 -0.02 0.09 16 31 H 0.39 -2.75 8.70 -74.06 -0.64 -3.40 16 32 H -0.29 -1.19 7.11 99.48 0.71 -0.48 16 33 H -0.30 -1.90 7.11 99.48 0.71 -1.19 16 34 H 0.15 -0.51 4.90 -2.91 -0.01 -0.52 16 35 H 0.14 0.57 8.06 -2.91 -0.02 0.54 16 36 H 0.41 -1.44 7.95 -92.71 -0.74 -2.18 16 37 H 0.08 -0.29 8.09 -2.39 -0.02 -0.31 16 38 H 0.03 0.22 7.17 -2.39 -0.02 0.20 16 39 H 0.39 -2.55 9.12 -74.06 -0.68 -3.22 16 40 H 0.12 -1.02 8.06 -2.39 -0.02 -1.04 16 41 H 0.09 -0.61 8.09 -2.39 -0.02 -0.63 16 42 H 0.40 -4.47 9.12 -74.05 -0.68 -5.14 16 43 H 0.05 0.53 7.19 -2.38 -0.02 0.51 16 44 H 0.12 -0.24 8.10 -2.39 -0.02 -0.26 16 Total: 0.00 -27.05 360.79 -4.34 -31.39 By element: Atomic # 1 Polarization: -17.56 SS G_CDS: -1.61 Total: -19.18 kcal Atomic # 6 Polarization: 3.98 SS G_CDS: 3.44 Total: 7.42 kcal Atomic # 7 Polarization: -1.01 SS G_CDS: -1.88 Total: -2.88 kcal Atomic # 8 Polarization: -11.71 SS G_CDS: -6.33 Total: -18.05 kcal Atomic # 14 Polarization: -0.75 SS G_CDS: 2.04 Total: 1.29 kcal Total: -27.05 -4.34 -31.39 kcal The number of atoms in the molecule is 44 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_18341542_10157680.mol2 44 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -107.368 kcal (2) G-P(sol) polarization free energy of solvation -27.052 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -134.420 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -4.342 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -31.395 kcal (6) G-S(sol) free energy of system = (1) + (5) -138.762 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.97 seconds