Wall clock time and date at job start Sun Mar 7 2021 08:59:03 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42902 * 1 3 3 Si 1.86292 * 109.47375 * 2 1 4 4 C 1.50706 * 109.46997 * 239.99634 * 2 1 3 5 5 C 1.35449 * 126.06341 * 120.02387 * 4 2 1 6 6 N 1.35533 * 108.87181 * 179.72245 * 5 4 2 7 7 C 1.37654 * 108.64118 * 0.24801 * 6 5 4 8 8 C 1.46677 * 126.23202 * 179.97438 * 7 6 5 9 9 O 1.21698 * 120.00141 * 180.02562 * 8 7 6 10 10 N 1.34780 * 120.00217 * 0.02562 * 8 7 6 11 11 C 1.46498 * 120.00249 * 175.07100 * 10 8 7 12 12 C 1.53004 * 112.84771 * 65.38891 * 11 10 8 13 13 O 1.42891 * 109.47177 * 55.29123 * 12 11 10 14 14 C 1.53783 * 113.61601 * 196.58375 * 11 10 8 15 15 C 1.54056 * 86.98143 * 89.16270 * 14 11 10 16 16 H 1.09001 * 113.69082 * 139.99387 * 15 14 11 17 17 O 1.42900 * 113.61041 * 270.88303 * 15 14 11 18 18 C 1.53774 * 87.07863 * 25.43155 * 15 14 11 19 19 C 1.37862 * 107.53650 * 359.97438 * 7 6 5 20 20 H 0.96693 * 113.99683 * 60.00687 * 1 2 3 21 21 H 1.08999 * 109.47121 * 120.00210 * 2 1 3 22 22 H 1.48510 * 109.99876 * 298.67944 * 3 2 1 23 23 H 1.48498 * 110.00015 * 59.99953 * 3 2 1 24 24 H 1.08002 * 125.57020 * 359.97438 * 5 4 2 25 25 H 0.97001 * 125.68377 * 180.20468 * 6 5 4 26 26 H 0.97001 * 119.99668 * 355.07274 * 10 8 7 27 27 H 1.09000 * 109.46857 * 175.28491 * 12 11 10 28 28 H 1.08993 * 109.46914 * 295.28553 * 12 11 10 29 29 H 0.96700 * 113.99906 * 180.02562 * 13 12 11 30 30 H 1.08992 * 113.61446 * 203.66221 * 14 11 10 31 31 H 1.08994 * 113.61218 * 334.57401 * 14 11 10 32 32 H 0.96705 * 114.00057 * 277.49320 * 17 15 14 33 33 H 1.09001 * 113.61654 * 220.02218 * 18 15 14 34 34 H 1.09002 * 113.61284 * 89.11995 * 18 15 14 35 35 H 1.07999 * 126.46328 * 180.02562 * 19 7 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0501 1.7563 0.0000 4 6 1.9313 -0.7105 -1.2305 5 6 2.7136 -0.1742 -2.1974 6 7 2.9613 -1.1202 -3.1359 7 6 2.3224 -2.2827 -2.7681 8 6 2.3331 -3.5491 -3.5079 9 8 1.7251 -4.5110 -3.0765 10 7 3.0161 -3.6476 -4.6656 11 6 3.1168 -4.9395 -5.3492 12 6 1.7665 -5.4501 -5.8562 13 8 1.1678 -4.4607 -6.6955 14 6 4.2317 -4.9915 -6.4070 15 6 5.1702 -5.4560 -5.2771 16 1 5.8675 -6.2371 -5.5802 17 8 5.8081 -4.3810 -4.5846 18 6 3.9176 -5.9913 -4.5636 19 6 1.6708 -2.0398 -1.5777 20 1 -0.3932 0.4416 -0.7651 21 1 1.7924 -0.5139 0.8900 22 1 1.5880 2.4585 -1.2243 23 1 1.5616 2.4678 1.2085 24 1 3.0834 0.8404 -2.2155 25 1 3.4987 -0.9982 -3.9342 26 1 3.4411 -2.8631 -5.0462 27 1 1.9156 -6.3675 -6.4256 28 1 1.1124 -5.6512 -5.0079 29 1 0.3068 -4.7172 -7.0533 30 1 4.0684 -5.7457 -7.1767 31 1 4.4900 -4.0153 -6.8174 32 1 6.5966 -4.0400 -5.0286 33 1 3.9225 -5.8218 -3.4869 34 1 3.6687 -7.0184 -4.8303 35 1 1.0748 -2.7445 -1.0169 There are 49 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 49 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_18341542_10543058.mol2 35 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 08:59:03 Heat of formation + Delta-G solvation = -79.575524 kcal Electronic energy + Delta-G solvation = -21206.977240 eV Core-core repulsion = 17787.845239 eV Total energy + Delta-G solvation = -3419.132001 eV No. of doubly occupied orbitals = 49 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 269.114 amu Computer time = 0.54 seconds Orbital eigenvalues (eV) -42.45278 -41.48812 -39.16383 -37.69256 -37.53891 -35.97273 -34.01873 -32.37099 -30.60499 -28.64332 -27.06938 -26.46499 -24.53887 -23.02770 -21.19474 -20.87610 -20.20311 -19.95904 -18.37682 -18.23364 -17.55344 -16.96539 -16.85632 -16.55179 -16.23998 -15.76939 -15.63641 -15.34910 -15.09273 -14.71866 -14.38164 -14.31964 -13.81556 -13.71306 -13.46225 -13.39877 -13.29165 -12.68852 -12.34678 -12.26516 -11.75745 -11.50943 -11.22745 -11.09937 -10.65693 -10.42875 -9.98814 -9.85472 -9.20782 -4.91443 0.53180 1.36620 1.64284 1.64961 1.98577 2.07674 2.10326 2.50653 2.89119 2.98575 3.36146 3.52245 3.55614 3.65477 3.88532 3.96869 4.06788 4.11735 4.34469 4.38111 4.47646 4.49314 4.59581 4.71662 4.72736 4.80509 4.94241 4.97074 5.00218 5.15839 5.54342 5.69098 5.89343 6.30550 6.51951 6.56229 6.60756 6.63628 7.27964 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.531 6.531 2 C -0.040 4.040 3 Si 0.682 3.318 4 C -0.209 4.209 5 C 0.033 3.967 6 N -0.533 5.533 7 C -0.051 4.051 8 C 0.597 3.403 9 O -0.528 6.528 10 N -0.692 5.692 11 C 0.165 3.835 12 C 0.072 3.928 13 O -0.570 6.570 14 C -0.164 4.164 15 C 0.079 3.921 16 H 0.075 0.925 17 O -0.546 6.546 18 C -0.131 4.131 19 C -0.079 4.079 20 H 0.374 0.626 21 H 0.115 0.885 22 H -0.261 1.261 23 H -0.259 1.259 24 H 0.175 0.825 25 H 0.418 0.582 26 H 0.396 0.604 27 H 0.055 0.945 28 H 0.066 0.934 29 H 0.380 0.620 30 H 0.105 0.895 31 H 0.080 0.920 32 H 0.381 0.619 33 H 0.089 0.911 34 H 0.107 0.893 35 H 0.149 0.851 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 5.482 0.963 -5.085 7.539 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.337 6.337 2 C -0.150 4.150 3 Si 0.584 3.416 4 C -0.216 4.216 5 C -0.104 4.104 6 N -0.129 5.129 7 C -0.164 4.164 8 C 0.385 3.615 9 O -0.404 6.404 10 N -0.342 5.342 11 C 0.078 3.922 12 C -0.007 4.007 13 O -0.375 6.375 14 C -0.202 4.202 15 C 0.020 3.980 16 H 0.093 0.907 17 O -0.352 6.352 18 C -0.169 4.169 19 C -0.106 4.106 20 H 0.221 0.779 21 H 0.133 0.867 22 H -0.186 1.186 23 H -0.183 1.183 24 H 0.192 0.808 25 H 0.255 0.745 26 H 0.230 0.770 27 H 0.073 0.927 28 H 0.084 0.916 29 H 0.227 0.773 30 H 0.123 0.877 31 H 0.099 0.901 32 H 0.228 0.772 33 H 0.108 0.892 34 H 0.125 0.875 35 H 0.167 0.833 Dipole moment (debyes) X Y Z Total from point charges 5.078 0.966 -3.798 6.415 hybrid contribution -0.665 0.074 -1.720 1.846 sum 4.413 1.040 -5.518 7.142 Atomic orbital electron populations 1.86599 1.18107 1.79863 1.49091 1.24327 0.83329 1.09913 0.97453 0.95459 0.91287 0.74573 0.80329 1.19817 1.06505 0.95833 0.99481 1.21839 1.02818 0.94928 0.90777 1.41924 1.40321 1.09658 1.20957 1.20416 1.07903 0.87501 1.00579 1.16962 0.78425 0.86267 0.79840 1.90830 1.43578 1.37669 1.68368 1.45195 1.55029 1.10506 1.23451 1.21143 0.93108 0.84803 0.93125 1.22514 0.94137 0.90245 0.93820 1.86427 1.38566 1.44667 1.67833 1.24001 0.95653 1.03497 0.97020 1.22776 0.93476 0.89451 0.92325 0.90675 1.86511 1.45586 1.52026 1.51031 1.23382 0.92880 0.98606 1.02072 1.21180 0.99560 0.95715 0.94101 0.77871 0.86739 1.18552 1.18350 0.80820 0.74452 0.76956 0.92694 0.91625 0.77274 0.87675 0.90147 0.77187 0.89243 0.87484 0.83315 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.53 -1.37 12.88 -35.23 -0.45 -1.83 16 2 C -0.04 -0.03 3.02 36.01 0.11 0.08 16 3 Si 0.68 -0.67 30.59 -169.99 -5.20 -5.87 16 4 C -0.21 -0.24 5.44 -105.02 -0.57 -0.81 16 5 C 0.03 -0.03 10.45 -16.91 -0.18 -0.21 16 6 N -0.53 0.52 5.99 -9.39 -0.06 0.46 16 7 C -0.05 -0.13 7.05 -81.98 -0.58 -0.71 16 8 C 0.60 2.25 7.28 -12.85 -0.09 2.16 16 9 O -0.53 -3.69 14.87 5.19 0.08 -3.61 16 10 N -0.69 -0.66 4.53 -48.14 -0.22 -0.87 16 11 C 0.17 0.07 0.74 -131.01 -0.10 -0.02 16 12 C 0.07 0.06 6.24 37.16 0.23 0.29 16 13 O -0.57 -0.67 13.54 -35.23 -0.48 -1.14 16 14 C -0.16 0.32 7.22 -25.77 -0.19 0.13 16 15 C 0.08 -0.13 5.28 -25.78 -0.14 -0.26 16 16 H 0.08 -0.22 8.14 -51.93 -0.42 -0.65 16 17 O -0.55 0.61 13.09 -35.23 -0.46 0.15 16 18 C -0.13 -0.04 6.86 -25.92 -0.18 -0.22 16 19 C -0.08 -0.27 10.59 -39.12 -0.41 -0.68 16 20 H 0.37 -0.11 8.70 45.56 0.40 0.29 16 21 H 0.11 0.05 7.96 -51.93 -0.41 -0.36 16 22 H -0.26 -0.17 7.11 56.52 0.40 0.23 16 23 H -0.26 -0.69 7.11 56.52 0.40 -0.29 16 24 H 0.17 -0.71 6.19 -52.49 -0.32 -1.04 16 25 H 0.42 -1.66 8.20 -40.82 -0.33 -2.00 16 26 H 0.40 -0.45 7.80 -40.82 -0.32 -0.76 16 27 H 0.05 -0.07 8.08 -51.93 -0.42 -0.49 16 28 H 0.07 0.20 6.80 -51.93 -0.35 -0.16 16 29 H 0.38 -0.92 9.12 45.56 0.42 -0.50 16 30 H 0.10 -0.31 8.06 -51.93 -0.42 -0.72 16 31 H 0.08 -0.18 8.09 -51.93 -0.42 -0.60 16 32 H 0.38 -1.98 9.12 45.56 0.42 -1.56 16 33 H 0.09 0.28 7.54 -51.93 -0.39 -0.11 16 34 H 0.11 -0.16 8.10 -51.93 -0.42 -0.58 16 35 H 0.15 0.65 8.06 -52.49 -0.42 0.22 16 LS Contribution 299.83 15.07 4.52 4.52 Total: 0.00 -10.53 299.83 -6.99 -17.52 By element: Atomic # 1 Polarization: -6.44 SS G_CDS: -2.63 Total: -9.07 kcal Atomic # 6 Polarization: 1.83 SS G_CDS: -2.09 Total: -0.26 kcal Atomic # 7 Polarization: -0.14 SS G_CDS: -0.27 Total: -0.41 kcal Atomic # 8 Polarization: -5.12 SS G_CDS: -1.31 Total: -6.43 kcal Atomic # 14 Polarization: -0.67 SS G_CDS: -5.20 Total: -5.87 kcal Total LS contribution 4.52 Total: 4.52 kcal Total: -10.53 -6.99 -17.52 kcal The number of atoms in the molecule is 35 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_18341542_10543058.mol2 35 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -62.051 kcal (2) G-P(sol) polarization free energy of solvation -10.533 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -72.584 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.992 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -17.524 kcal (6) G-S(sol) free energy of system = (1) + (5) -79.576 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.54 seconds