Wall clock time and date at job start Sun Mar 7 2021 08:59:31 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50699 * 1 3 3 C 1.34854 * 125.89770 * 2 1 4 4 C 1.40936 * 107.46808 * 180.02562 * 3 2 1 5 5 C 1.50703 * 126.26653 * 180.02562 * 4 3 2 6 6 O 1.42900 * 109.46702 * 254.97236 * 5 4 3 7 7 Si 1.86302 * 109.47008 * 14.96915 * 5 4 3 8 8 C 1.34851 * 107.46620 * 359.75223 * 4 3 2 9 9 C 1.50698 * 125.89899 * 180.27743 * 8 4 3 10 10 N 1.36561 * 125.90239 * 179.97438 * 2 1 3 11 11 C 1.40226 * 125.66938 * 359.97438 * 10 2 1 12 12 C 1.38546 * 119.99328 * 295.26257 * 11 10 2 13 13 C 1.39504 * 119.77989 * 180.29464 * 12 11 10 14 14 C 1.47861 * 120.11525 * 179.71993 * 13 12 11 15 15 O 1.21551 * 119.99605 * 359.72577 * 14 13 12 16 16 N 1.34771 * 120.00542 * 179.72266 * 14 13 12 17 17 C 1.46496 * 120.00346 * 185.09443 * 16 14 13 18 18 C 1.53004 * 112.84917 * 64.95727 * 17 16 14 19 19 O 1.42903 * 109.46678 * 43.94112 * 18 17 16 20 20 C 1.53783 * 113.69175 * 196.22834 * 17 16 14 21 21 C 1.53780 * 87.08264 * 89.12601 * 20 17 16 22 22 H 1.08995 * 113.61552 * 139.97806 * 21 20 17 23 23 O 1.42893 * 113.61398 * 270.88591 * 21 20 17 24 24 C 1.53782 * 113.61645 * 293.76339 * 17 16 14 25 25 C 1.39578 * 119.77702 * 359.44542 * 13 12 11 26 26 C 1.38019 * 119.98290 * 0.27885 * 25 13 12 27 27 C 1.38226 * 120.21882 * 0.02562 * 26 25 13 28 28 H 1.09009 * 109.47116 * 270.00098 * 1 2 3 29 29 H 1.09000 * 109.47221 * 30.00229 * 1 2 3 30 30 H 1.08999 * 109.47084 * 150.00922 * 1 2 3 31 31 H 1.08008 * 126.26380 * 0.02562 * 3 2 1 32 32 H 1.09003 * 109.47229 * 134.97255 * 5 4 3 33 33 H 0.96706 * 113.99446 * 180.02562 * 6 5 4 34 34 H 1.48496 * 110.00150 * 300.00231 * 7 5 4 35 35 H 1.48504 * 110.00100 * 61.32319 * 7 5 4 36 36 H 1.09003 * 109.47068 * 270.14063 * 9 8 4 37 37 H 1.08998 * 109.47480 * 30.13576 * 9 8 4 38 38 H 1.08999 * 109.47550 * 150.13933 * 9 8 4 39 39 H 1.07994 * 120.11139 * 0.03947 * 12 11 10 40 40 H 0.97002 * 119.99607 * 5.09280 * 16 14 13 41 41 H 1.08997 * 109.47377 * 283.93938 * 18 17 16 42 42 H 1.09003 * 109.46836 * 163.93404 * 18 17 16 43 43 H 0.96702 * 113.99639 * 179.97438 * 19 18 17 44 44 H 1.08998 * 113.61236 * 203.67688 * 20 17 16 45 45 H 1.08997 * 113.61295 * 334.57585 * 20 17 16 46 46 H 0.96699 * 114.00369 * 277.49030 * 23 21 20 47 47 H 1.09007 * 113.61033 * 25.34917 * 24 17 16 48 48 H 1.09000 * 113.61718 * 156.16419 * 24 17 16 49 49 H 1.07999 * 120.00934 * 180.29821 * 25 13 12 50 50 H 1.08005 * 119.89180 * 179.97438 * 26 25 13 51 51 H 1.07991 * 119.88711 * 179.97438 * 27 26 25 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.2977 1.0924 0.0000 4 6 3.6348 0.6469 -0.0006 5 6 4.8647 1.5178 -0.0003 6 8 5.4549 1.5088 -1.3016 7 14 4.3909 3.2612 0.4547 8 6 3.6121 -0.7015 0.0046 9 6 4.8178 -1.6055 0.0119 10 7 2.3078 -1.1062 0.0005 11 6 1.8645 -2.4365 0.0016 12 6 1.1601 -2.9309 1.0874 13 6 0.7266 -4.2569 1.0864 14 6 -0.0203 -4.7940 2.2440 15 8 -0.2532 -4.0813 3.2007 16 7 -0.4430 -6.0737 2.2383 17 6 -1.2779 -6.5743 3.3331 18 6 -2.6456 -5.8914 3.3973 19 8 -3.1896 -5.7902 2.0797 20 6 -1.3516 -8.1088 3.4021 21 6 -0.1090 -8.0494 4.3061 22 1 -0.1398 -8.7537 5.1374 23 8 1.1248 -8.0916 3.5866 24 6 -0.5515 -6.6268 4.6875 25 6 0.9953 -5.0733 -0.0134 26 6 1.6928 -4.5693 -1.0924 27 6 2.1276 -3.2572 -1.0884 28 1 -0.3634 0.0000 1.0277 29 1 -0.3634 0.8900 -0.5139 30 1 -0.3633 -0.8901 -0.5137 31 1 1.9668 2.1206 0.0004 32 1 5.5811 1.1345 0.7263 33 1 6.2533 2.0495 -1.3751 34 1 3.4144 3.7951 -0.5283 35 1 3.8049 3.2887 1.8190 36 1 5.1132 -1.8254 -1.0140 37 1 5.6401 -1.1104 0.5285 38 1 4.5723 -2.5345 0.5264 39 1 0.9510 -2.2932 1.9334 40 1 -0.1943 -6.6634 1.5093 41 1 -2.5341 -4.8938 3.8220 42 1 -3.3165 -6.4800 4.0231 43 1 -4.0582 -5.3666 2.0444 44 1 -2.2424 -8.4808 3.9082 45 1 -1.1721 -8.5980 2.4448 46 1 1.4084 -8.9837 3.3440 47 1 0.2741 -5.9195 4.7678 48 1 -1.2234 -6.5921 5.5450 49 1 0.6572 -6.0990 -0.0201 50 1 1.9002 -5.2024 -1.9425 51 1 2.6733 -2.8685 -1.9354 There are 69 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 69 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_18341542_12335854.mol2 51 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 08:59:31 Heat of formation + Delta-G solvation = -45.609833 kcal Electronic energy + Delta-G solvation = -34874.371450 eV Core-core repulsion = 30321.657275 eV Total energy + Delta-G solvation = -4552.714176 eV No. of doubly occupied orbitals = 69 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 373.177 amu Computer time = 1.32 seconds Orbital eigenvalues (eV) -42.79012 -41.87084 -40.36473 -38.90571 -37.59178 -37.48493 -35.98604 -34.66271 -33.72970 -33.57826 -32.20674 -30.41371 -30.08693 -28.67377 -27.10837 -27.07015 -25.44070 -24.64667 -23.57687 -23.28543 -21.89258 -21.00012 -20.34724 -19.98075 -18.70121 -18.38946 -18.18852 -18.13292 -17.34183 -17.26797 -17.21764 -16.58961 -16.41311 -15.92270 -15.72514 -15.57741 -15.41457 -15.14424 -14.99518 -14.88284 -14.75189 -14.70731 -14.08203 -14.05552 -13.80071 -13.71305 -13.61391 -13.50020 -13.39169 -13.34159 -13.16987 -13.10603 -12.89702 -12.69535 -12.47319 -12.38099 -12.28538 -12.18940 -11.68066 -11.52557 -11.15911 -11.06949 -10.67048 -10.35781 -10.22643 -10.03403 -9.92010 -9.41679 -8.70022 -4.79270 -0.37576 -0.01543 1.22006 1.53453 1.76684 1.79184 1.83414 1.97191 2.07380 2.27377 2.66843 2.89767 2.99998 3.34146 3.45834 3.51270 3.66074 3.69794 3.71698 3.78769 3.89232 3.94407 4.04261 4.07653 4.18565 4.26144 4.30910 4.34059 4.37462 4.45010 4.47475 4.48852 4.57445 4.62944 4.65807 4.66940 4.70050 4.72844 4.76881 4.77731 4.91660 4.99228 5.00927 5.04114 5.06917 5.10556 5.11911 5.28196 5.45869 5.48587 5.57978 6.07681 6.26527 6.51114 6.54293 6.56671 6.59933 6.87486 7.24647 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.086 4.086 2 C 0.030 3.970 3 C -0.191 4.191 4 C -0.153 4.153 5 C -0.032 4.032 6 O -0.548 6.548 7 Si 0.688 3.312 8 C 0.056 3.944 9 C -0.082 4.082 10 N -0.402 5.402 11 C 0.110 3.890 12 C -0.051 4.051 13 C -0.117 4.117 14 C 0.569 3.431 15 O -0.534 6.534 16 N -0.681 5.681 17 C 0.164 3.836 18 C 0.074 3.926 19 O -0.567 6.567 20 C -0.166 4.166 21 C 0.079 3.921 22 H 0.075 0.925 23 O -0.546 6.546 24 C -0.132 4.132 25 C -0.075 4.075 26 C -0.111 4.111 27 C -0.084 4.084 28 H 0.073 0.927 29 H 0.082 0.918 30 H 0.065 0.935 31 H 0.137 0.863 32 H 0.064 0.936 33 H 0.376 0.624 34 H -0.255 1.255 35 H -0.260 1.260 36 H 0.075 0.925 37 H 0.082 0.918 38 H 0.062 0.938 39 H 0.142 0.858 40 H 0.402 0.598 41 H 0.060 0.940 42 H 0.056 0.944 43 H 0.380 0.620 44 H 0.105 0.895 45 H 0.081 0.919 46 H 0.381 0.619 47 H 0.091 0.909 48 H 0.106 0.894 49 H 0.133 0.867 50 H 0.141 0.859 51 H 0.135 0.865 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.369 -5.269 -0.143 5.284 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.144 4.144 2 C -0.078 4.078 3 C -0.214 4.214 4 C -0.159 4.159 5 C -0.143 4.143 6 O -0.354 6.354 7 Si 0.590 3.410 8 C -0.053 4.053 9 C -0.140 4.140 10 N -0.077 5.077 11 C 0.021 3.979 12 C -0.071 4.071 13 C -0.121 4.121 14 C 0.357 3.643 15 O -0.412 6.412 16 N -0.332 5.332 17 C 0.077 3.923 18 C -0.005 4.005 19 O -0.372 6.372 20 C -0.204 4.204 21 C 0.020 3.980 22 H 0.093 0.907 23 O -0.351 6.351 24 C -0.171 4.171 25 C -0.094 4.094 26 C -0.130 4.130 27 C -0.103 4.103 28 H 0.092 0.908 29 H 0.101 0.899 30 H 0.083 0.917 31 H 0.154 0.846 32 H 0.081 0.919 33 H 0.223 0.777 34 H -0.180 1.180 35 H -0.184 1.184 36 H 0.094 0.906 37 H 0.100 0.900 38 H 0.081 0.919 39 H 0.160 0.840 40 H 0.239 0.761 41 H 0.078 0.922 42 H 0.074 0.926 43 H 0.227 0.773 44 H 0.124 0.876 45 H 0.100 0.900 46 H 0.229 0.771 47 H 0.109 0.891 48 H 0.124 0.876 49 H 0.151 0.849 50 H 0.159 0.841 51 H 0.153 0.847 Dipole moment (debyes) X Y Z Total from point charges -0.572 -4.572 0.580 4.644 hybrid contribution -0.676 -1.180 -0.273 1.387 sum -1.248 -5.752 0.307 5.894 Atomic orbital electron populations 1.20353 0.87745 1.03354 1.02915 1.20352 0.93520 0.84722 1.09179 1.20496 0.92187 0.97389 1.11360 1.18514 0.93248 0.91675 1.12500 1.23944 0.94169 1.08335 0.87871 1.86531 1.45704 1.73444 1.29723 0.95874 0.87019 0.78472 0.79669 1.20235 0.83922 0.93769 1.07412 1.20320 0.93270 0.97445 1.02943 1.41354 1.05612 1.02810 1.57904 1.17515 1.01403 0.83692 0.95297 1.21247 0.94526 0.94517 0.96811 1.19776 1.02327 0.94348 0.95624 1.17993 0.78532 0.81637 0.86173 1.90770 1.57082 1.58352 1.34978 1.45136 1.51809 1.11326 1.24952 1.21180 0.88990 0.93816 0.88346 1.22494 0.92860 1.00403 0.84721 1.86456 1.38749 1.83883 1.28117 1.24021 1.00169 0.94301 1.01945 1.22697 0.83614 0.98071 0.93635 0.90694 1.86517 1.38260 1.33610 1.76732 1.23400 1.00930 0.96430 0.96298 1.21435 0.96011 0.99535 0.92411 1.21050 0.98129 0.94878 0.98927 1.21443 0.98321 0.93884 0.96672 0.90793 0.89949 0.91651 0.84565 0.91851 0.77707 1.17978 1.18443 0.90589 0.89969 0.91918 0.84047 0.76131 0.92215 0.92559 0.77319 0.87642 0.89988 0.77126 0.89081 0.87622 0.84931 0.84125 0.84682 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.09 -0.21 9.92 36.01 0.36 0.15 16 2 C 0.03 0.15 6.80 -81.69 -0.56 -0.41 16 3 C -0.19 -1.06 9.27 -39.76 -0.37 -1.43 16 4 C -0.15 -0.79 5.39 -104.80 -0.56 -1.36 16 5 C -0.03 -0.08 2.60 36.01 0.09 0.02 16 6 O -0.55 -1.17 12.86 -35.23 -0.45 -1.62 16 7 Si 0.69 0.88 30.84 -169.99 -5.24 -4.36 16 8 C 0.06 0.26 6.81 -81.69 -0.56 -0.30 16 9 C -0.08 -0.16 9.73 36.00 0.35 0.19 16 10 N -0.40 -1.78 2.79 -52.61 -0.15 -1.93 16 11 C 0.11 0.33 4.65 -83.64 -0.39 -0.06 16 12 C -0.05 -0.17 9.25 -39.00 -0.36 -0.54 16 13 C -0.12 -0.28 5.87 -104.99 -0.62 -0.89 16 14 C 0.57 2.08 7.33 -12.32 -0.09 1.99 16 15 O -0.53 -3.58 14.44 5.32 0.08 -3.50 16 16 N -0.68 -0.78 4.27 -47.78 -0.20 -0.98 16 17 C 0.16 0.07 0.83 -131.01 -0.11 -0.04 16 18 C 0.07 0.04 6.26 37.16 0.23 0.27 16 19 O -0.57 -0.52 13.32 -35.23 -0.47 -0.99 16 20 C -0.17 0.33 7.19 -25.92 -0.19 0.15 16 21 C 0.08 -0.11 5.28 -25.92 -0.14 -0.25 16 22 H 0.08 -0.21 8.14 -51.93 -0.42 -0.63 16 23 O -0.55 0.35 13.09 -35.23 -0.46 -0.11 16 24 C -0.13 -0.07 6.79 -25.92 -0.18 -0.25 16 25 C -0.08 0.02 9.54 -39.16 -0.37 -0.35 16 26 C -0.11 0.08 10.02 -39.67 -0.40 -0.32 16 27 C -0.08 -0.09 9.73 -39.32 -0.38 -0.47 16 28 H 0.07 0.15 8.14 -51.92 -0.42 -0.28 16 29 H 0.08 0.10 8.14 -51.93 -0.42 -0.32 16 30 H 0.06 0.14 7.83 -51.93 -0.41 -0.26 16 31 H 0.14 0.68 6.55 -52.48 -0.34 0.34 16 32 H 0.06 0.05 7.49 -51.93 -0.39 -0.34 16 33 H 0.38 -1.16 8.74 45.56 0.40 -0.76 16 34 H -0.26 -1.14 7.06 56.52 0.40 -0.74 16 35 H -0.26 -1.10 7.11 56.52 0.40 -0.70 16 36 H 0.08 0.10 8.14 -51.93 -0.42 -0.32 16 37 H 0.08 0.08 7.50 -51.93 -0.39 -0.31 16 38 H 0.06 0.10 7.83 -51.93 -0.41 -0.30 16 39 H 0.14 0.68 7.65 -52.49 -0.40 0.27 16 40 H 0.40 -0.28 6.71 -40.82 -0.27 -0.55 16 41 H 0.06 0.13 7.43 -51.93 -0.39 -0.25 16 42 H 0.06 -0.09 7.85 -51.93 -0.41 -0.50 16 43 H 0.38 -1.01 9.12 45.56 0.42 -0.60 16 44 H 0.11 -0.34 7.90 -51.93 -0.41 -0.75 16 45 H 0.08 -0.19 8.09 -51.93 -0.42 -0.61 16 46 H 0.38 -1.82 9.12 45.56 0.42 -1.40 16 47 H 0.09 0.33 7.28 -51.93 -0.38 -0.05 16 48 H 0.11 -0.14 8.10 -51.93 -0.42 -0.56 16 49 H 0.13 -0.36 6.41 -52.49 -0.34 -0.70 16 50 H 0.14 -0.46 8.06 -52.48 -0.42 -0.88 16 51 H 0.14 0.06 8.06 -52.49 -0.42 -0.36 16 LS Contribution 419.32 15.07 6.32 6.32 Total: 0.00 -11.96 419.32 -10.69 -22.65 By element: Atomic # 1 Polarization: -5.70 SS G_CDS: -5.88 Total: -11.57 kcal Atomic # 6 Polarization: 0.34 SS G_CDS: -4.23 Total: -3.89 kcal Atomic # 7 Polarization: -2.56 SS G_CDS: -0.35 Total: -2.91 kcal Atomic # 8 Polarization: -4.92 SS G_CDS: -1.31 Total: -6.23 kcal Atomic # 14 Polarization: 0.88 SS G_CDS: -5.24 Total: -4.36 kcal Total LS contribution 6.32 Total: 6.32 kcal Total: -11.96 -10.69 -22.65 kcal The number of atoms in the molecule is 51 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_18341542_12335854.mol2 51 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -22.959 kcal (2) G-P(sol) polarization free energy of solvation -11.964 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -34.923 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.687 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.651 kcal (6) G-S(sol) free energy of system = (1) + (5) -45.610 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.32 seconds