Wall clock time and date at job start Sun Mar 7 2021 08:59:49 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42903 * 1 3 3 C 1.35647 * 117.00232 * 2 1 4 4 C 1.40134 * 120.15217 * 180.02562 * 3 2 1 5 5 C 1.47531 * 120.19178 * 359.97438 * 4 3 2 6 6 O 1.21588 * 119.99958 * 0.02562 * 5 4 3 7 7 N 1.34777 * 120.00067 * 180.02562 * 5 4 3 8 8 C 1.46503 * 120.00049 * 174.64628 * 7 5 4 9 9 C 1.52998 * 112.85159 * 75.57369 * 8 7 5 10 10 O 1.42907 * 109.46795 * 55.35333 * 9 8 7 11 11 C 1.53780 * 113.61644 * 206.88656 * 8 7 5 12 12 C 1.53781 * 87.08277 * 89.11429 * 11 8 7 13 13 H 1.09002 * 113.61029 * 139.98682 * 12 11 8 14 14 O 1.42892 * 113.61232 * 270.88257 * 12 11 8 15 15 C 1.53775 * 87.07973 * 25.43400 * 12 11 8 16 16 C 1.39710 * 119.61950 * 180.02562 * 4 3 2 17 17 C 1.37787 * 119.90673 * 359.97438 * 16 4 3 18 18 C 1.50701 * 119.84987 * 179.97438 * 17 16 4 19 19 O 1.42892 * 109.47086 * 65.00082 * 18 17 16 20 20 Si 1.86305 * 109.47032 * 185.00061 * 18 17 16 21 21 C 1.38548 * 120.30090 * 0.25707 * 17 16 4 22 22 C 1.38051 * 120.38750 * 359.48323 * 21 17 16 23 23 H 1.08995 * 109.47078 * 180.02562 * 1 2 3 24 24 H 1.09004 * 109.46911 * 299.99926 * 1 2 3 25 25 H 1.08995 * 109.46956 * 59.99558 * 1 2 3 26 26 H 0.96998 * 120.00184 * 354.64874 * 7 5 4 27 27 H 1.09002 * 109.47531 * 175.35257 * 9 8 7 28 28 H 1.08995 * 109.47594 * 295.35741 * 9 8 7 29 29 H 0.96697 * 113.99693 * 179.97438 * 10 9 8 30 30 H 1.09000 * 113.61620 * 203.66482 * 11 8 7 31 31 H 1.08999 * 113.61498 * 334.56251 * 11 8 7 32 32 H 0.96708 * 114.00624 * 277.49792 * 14 12 11 33 33 H 1.09004 * 113.61399 * 220.01819 * 15 12 11 34 34 H 1.09005 * 113.69274 * 89.12801 * 15 12 11 35 35 H 1.08001 * 120.04789 * 180.02562 * 16 4 3 36 36 H 1.09000 * 109.47255 * 304.99442 * 18 17 16 37 37 H 0.96701 * 114.00215 * 60.00339 * 19 18 17 38 38 H 1.48499 * 109.99909 * 58.68083 * 20 18 17 39 39 H 1.48500 * 109.99916 * 180.02562 * 20 18 17 40 40 H 1.08006 * 119.80598 * 179.74900 * 21 17 16 41 41 H 1.08011 * 119.96061 * 180.27939 * 22 21 17 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0449 1.2086 0.0000 4 6 3.4441 1.2856 -0.0005 5 6 4.2550 0.0531 -0.0005 6 8 3.7095 -1.0335 -0.0005 7 7 5.6005 0.1317 -0.0005 8 6 6.4054 -1.0867 0.1178 9 6 6.4457 -1.9003 -1.1773 10 8 6.9086 -1.0720 -2.2459 11 6 7.7904 -0.8517 0.7434 12 6 7.1273 -1.0932 2.1097 13 1 7.7405 -1.6781 2.7953 14 8 6.6011 0.0929 2.7081 15 6 6.0727 -1.9263 1.3626 16 6 4.0668 2.5362 0.0000 17 6 3.3039 3.6836 0.0005 18 6 3.9769 5.0320 0.0017 19 8 4.6995 5.2047 -1.2189 20 14 2.6886 6.3689 0.1553 21 6 1.9207 3.6033 0.0059 22 6 1.2926 2.3740 0.0000 23 1 -0.3633 -1.0276 0.0005 24 1 -0.3633 0.5138 0.8900 25 1 -0.3633 0.5139 -0.8899 26 1 6.0359 0.9949 -0.0789 27 1 7.1221 -2.7462 -1.0541 28 1 5.4452 -2.2658 -1.4082 29 1 6.9599 -1.5234 -3.0995 30 1 8.5254 -1.6104 0.4746 31 1 8.1622 0.1644 0.6119 32 1 7.2598 0.6213 3.1796 33 1 5.0576 -1.7776 1.7310 34 1 6.3367 -2.9791 1.2624 35 1 5.1447 2.6037 -0.0008 36 1 4.6662 5.0933 0.8439 37 1 4.1478 5.1619 -2.0120 38 1 1.9090 6.1819 1.4053 39 1 3.3395 7.7037 0.1570 40 1 1.3305 4.5078 0.0104 41 1 0.2138 2.3194 -0.0003 There are 57 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 57 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_18341542_12496546.mol2 41 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 08:59:49 Heat of formation + Delta-G solvation = -128.243344 kcal Electronic energy + Delta-G solvation = -27083.696628 eV Core-core repulsion = 23125.434191 eV Total energy + Delta-G solvation = -3958.262436 eV No. of doubly occupied orbitals = 57 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 310.134 amu Computer time = 0.76 seconds Orbital eigenvalues (eV) -41.89476 -41.09522 -39.14782 -38.95063 -37.47294 -37.08187 -35.80049 -33.95817 -32.22996 -31.73942 -28.70268 -28.38386 -26.91756 -26.14249 -25.27002 -23.42128 -22.50975 -21.37588 -20.14972 -19.43608 -18.40459 -18.24692 -18.12348 -17.85331 -17.22325 -16.76390 -16.56185 -16.38733 -16.16941 -15.83057 -15.79596 -15.50338 -15.28495 -14.84804 -14.59993 -14.50848 -14.28462 -13.64434 -13.63217 -13.48464 -13.26313 -13.18134 -13.04381 -12.57473 -12.36660 -12.11565 -12.09463 -12.01090 -11.77970 -11.37999 -11.00605 -10.90081 -10.57261 -10.27532 -10.11539 -9.72045 -9.19127 -5.06962 -0.14162 0.28289 1.27052 1.60592 1.95041 2.01084 2.23272 2.29696 2.85992 3.02612 3.11710 3.43694 3.52200 3.56951 3.64341 3.68118 3.74696 3.83038 4.05339 4.12957 4.19297 4.24544 4.26893 4.41548 4.43170 4.52149 4.55732 4.60894 4.61659 4.70587 4.74809 4.82311 4.87855 4.98313 5.09424 5.13794 5.16697 5.32582 5.58686 5.78007 6.37107 6.56537 6.66960 6.71591 6.77100 7.53460 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.019 3.981 2 O -0.279 6.279 3 C 0.191 3.809 4 C -0.169 4.169 5 C 0.569 3.431 6 O -0.520 6.520 7 N -0.690 5.690 8 C 0.166 3.834 9 C 0.074 3.926 10 O -0.568 6.568 11 C -0.165 4.165 12 C 0.079 3.921 13 H 0.073 0.927 14 O -0.544 6.544 15 C -0.130 4.130 16 C -0.016 4.016 17 C -0.170 4.170 18 C -0.062 4.062 19 O -0.540 6.540 20 Si 0.684 3.316 21 C -0.048 4.048 22 C -0.215 4.215 23 H 0.104 0.896 24 H 0.057 0.943 25 H 0.058 0.942 26 H 0.401 0.599 27 H 0.054 0.946 28 H 0.058 0.942 29 H 0.379 0.621 30 H 0.103 0.897 31 H 0.080 0.920 32 H 0.380 0.620 33 H 0.094 0.906 34 H 0.104 0.896 35 H 0.134 0.866 36 H 0.114 0.886 37 H 0.379 0.621 38 H -0.257 1.257 39 H -0.254 1.254 40 H 0.133 0.867 41 H 0.140 0.860 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.305 0.757 -1.188 1.441 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.076 4.076 2 O -0.189 6.189 3 C 0.143 3.857 4 C -0.173 4.173 5 C 0.357 3.643 6 O -0.397 6.397 7 N -0.342 5.342 8 C 0.078 3.922 9 C -0.005 4.005 10 O -0.373 6.373 11 C -0.203 4.203 12 C 0.019 3.981 13 H 0.091 0.909 14 O -0.349 6.349 15 C -0.168 4.168 16 C -0.035 4.035 17 C -0.171 4.171 18 C -0.172 4.172 19 O -0.346 6.346 20 Si 0.586 3.414 21 C -0.066 4.066 22 C -0.234 4.234 23 H 0.122 0.878 24 H 0.076 0.924 25 H 0.077 0.923 26 H 0.237 0.763 27 H 0.072 0.928 28 H 0.076 0.924 29 H 0.226 0.774 30 H 0.121 0.879 31 H 0.099 0.901 32 H 0.227 0.773 33 H 0.112 0.888 34 H 0.123 0.877 35 H 0.152 0.848 36 H 0.131 0.869 37 H 0.227 0.773 38 H -0.182 1.182 39 H -0.179 1.179 40 H 0.150 0.850 41 H 0.158 0.842 Dipole moment (debyes) X Y Z Total from point charges -0.957 0.704 -0.051 1.190 hybrid contribution 0.835 -0.074 0.036 0.839 sum -0.123 0.631 -0.015 0.643 Atomic orbital electron populations 1.23218 0.78367 1.04637 1.01381 1.86381 1.21033 1.25225 1.86279 1.19078 0.90936 0.85005 0.90729 1.19352 0.90832 0.94024 1.13088 1.17820 0.81631 0.88571 0.76274 1.90800 1.71626 1.28482 1.48770 1.45205 1.05201 1.08886 1.74903 1.21090 0.91875 0.86425 0.92760 1.22499 0.98903 0.92153 0.86915 1.86456 1.89406 1.41417 1.20031 1.23947 0.95742 1.03833 0.96738 1.22703 0.95427 0.87331 0.92596 0.90919 1.86532 1.39063 1.36533 1.72815 1.23343 1.01585 0.98361 0.93559 1.20969 0.99873 0.89869 0.92751 1.20109 0.93528 0.96020 1.07397 1.24959 1.03064 0.99021 0.90205 1.86503 1.37942 1.95083 1.15050 0.94854 0.81209 0.77650 0.87709 1.20942 0.93587 0.97183 0.94873 1.21212 1.00654 0.91601 1.09938 0.87762 0.92424 0.92327 0.76339 0.92770 0.92352 0.77419 0.87880 0.90102 0.77326 0.88791 0.87741 0.84823 0.86903 0.77330 1.18214 1.17856 0.84975 0.84217 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 0.00 9.81 101.05 0.99 0.99 16 2 O -0.28 -1.21 8.57 -40.52 -0.35 -1.55 16 3 C 0.19 0.65 6.70 -38.70 -0.26 0.39 16 4 C -0.17 -0.63 5.89 -104.85 -0.62 -1.25 16 5 C 0.57 2.94 7.27 -12.47 -0.09 2.85 16 6 O -0.52 -4.16 13.08 -16.59 -0.22 -4.38 16 7 N -0.69 -1.89 4.44 -47.88 -0.21 -2.10 16 8 C 0.17 0.30 0.76 -131.01 -0.10 0.20 16 9 C 0.07 0.12 6.42 37.16 0.24 0.36 16 10 O -0.57 -0.99 13.54 -35.23 -0.48 -1.46 16 11 C -0.16 0.07 7.23 -25.92 -0.19 -0.11 16 12 C 0.08 0.00 5.28 -25.92 -0.14 -0.13 16 13 H 0.07 -0.11 8.14 -51.93 -0.42 -0.53 16 14 O -0.54 -0.50 13.08 -35.23 -0.46 -0.96 16 15 C -0.13 -0.24 6.71 -25.92 -0.17 -0.41 16 16 C -0.02 -0.02 9.16 -39.20 -0.36 -0.38 16 17 C -0.17 -0.05 5.35 -104.67 -0.56 -0.61 16 18 C -0.06 0.03 2.79 36.01 0.10 0.13 16 19 O -0.54 0.05 12.83 -35.23 -0.45 -0.40 16 20 Si 0.68 -0.90 29.78 -169.99 -5.06 -5.96 16 21 C -0.05 0.02 8.65 -39.54 -0.34 -0.32 16 22 C -0.22 -0.13 9.03 -39.47 -0.36 -0.48 16 23 H 0.10 -0.13 8.14 -51.93 -0.42 -0.55 16 24 H 0.06 -0.09 7.66 -51.93 -0.40 -0.49 16 25 H 0.06 -0.11 7.66 -51.93 -0.40 -0.51 16 26 H 0.40 0.55 6.80 -40.82 -0.28 0.27 16 27 H 0.05 -0.03 8.09 -51.93 -0.42 -0.45 16 28 H 0.06 0.20 7.52 -51.93 -0.39 -0.19 16 29 H 0.38 -0.79 9.12 45.56 0.42 -0.37 16 30 H 0.10 -0.17 8.06 -51.93 -0.42 -0.59 16 31 H 0.08 -0.04 8.13 -51.93 -0.42 -0.46 16 32 H 0.38 -1.20 9.12 45.56 0.42 -0.79 16 33 H 0.09 0.47 6.71 -51.93 -0.35 0.13 16 34 H 0.10 -0.02 8.10 -51.93 -0.42 -0.44 16 35 H 0.13 0.04 6.42 -52.49 -0.34 -0.30 16 36 H 0.11 -0.02 7.96 -51.93 -0.41 -0.44 16 37 H 0.38 -1.42 8.70 45.56 0.40 -1.03 16 38 H -0.26 -0.27 7.11 56.52 0.40 0.13 16 39 H -0.25 -0.50 7.11 56.52 0.40 -0.10 16 40 H 0.13 -0.37 4.88 -52.48 -0.26 -0.63 16 41 H 0.14 -0.25 6.30 -52.48 -0.33 -0.58 16 LS Contribution 338.09 15.07 5.09 5.09 Total: 0.00 -10.80 338.09 -7.63 -18.43 By element: Atomic # 1 Polarization: -4.26 SS G_CDS: -3.65 Total: -7.91 kcal Atomic # 6 Polarization: 3.06 SS G_CDS: -1.85 Total: 1.21 kcal Atomic # 7 Polarization: -1.89 SS G_CDS: -0.21 Total: -2.10 kcal Atomic # 8 Polarization: -6.81 SS G_CDS: -1.95 Total: -8.76 kcal Atomic # 14 Polarization: -0.90 SS G_CDS: -5.06 Total: -5.96 kcal Total LS contribution 5.09 Total: 5.09 kcal Total: -10.80 -7.63 -18.43 kcal The number of atoms in the molecule is 41 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_18341542_12496546.mol2 41 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -109.812 kcal (2) G-P(sol) polarization free energy of solvation -10.800 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -120.612 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.631 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.431 kcal (6) G-S(sol) free energy of system = (1) + (5) -128.243 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.76 seconds