Wall clock time and date at job start Sun Mar 7 2021 08:59:52 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42906 * 1 3 3 Si 1.86305 * 109.46705 * 2 1 4 4 C 1.50692 * 109.47428 * 120.00060 * 2 1 3 5 5 C 1.37819 * 119.93853 * 14.99859 * 4 2 1 6 6 C 1.39672 * 119.87642 * 179.97438 * 5 4 2 7 7 C 1.47723 * 120.11434 * 179.97438 * 6 5 4 8 8 O 1.21575 * 120.00312 * 0.02562 * 7 6 5 9 9 N 1.34776 * 120.00195 * 179.97438 * 7 6 5 10 10 C 1.46497 * 120.00286 * 174.64530 * 9 7 6 11 11 C 1.53002 * 112.84922 * 75.58336 * 10 9 7 12 12 O 1.42902 * 109.47192 * 55.34765 * 11 10 9 13 13 C 1.53784 * 113.61220 * 206.88351 * 10 9 7 14 14 C 1.53789 * 87.07807 * 89.11889 * 13 10 9 15 15 H 1.09005 * 113.61325 * 139.97600 * 14 13 10 16 16 O 1.42893 * 113.68927 * 270.87066 * 14 13 10 17 17 C 1.53778 * 113.61661 * 304.38230 * 10 9 7 18 18 C 1.39627 * 119.76610 * 0.02562 * 6 5 4 19 19 C 1.37859 * 119.87933 * 359.97438 * 18 6 5 20 20 C 1.38630 * 120.11952 * 359.97438 * 19 18 6 21 21 F 1.35102 * 119.88167 * 180.02562 * 20 19 18 22 22 H 0.96699 * 113.99963 * 300.00109 * 1 2 3 23 23 H 1.08995 * 109.46901 * 240.00651 * 2 1 3 24 24 H 1.48497 * 110.00336 * 299.99793 * 3 2 1 25 25 H 1.48505 * 110.00210 * 61.32387 * 3 2 1 26 26 H 1.08002 * 120.06009 * 359.70988 * 5 4 2 27 27 H 0.97002 * 119.99395 * 354.64722 * 9 7 6 28 28 H 1.09000 * 109.47144 * 175.35489 * 11 10 9 29 29 H 1.09002 * 109.46617 * 295.34901 * 11 10 9 30 30 H 0.96696 * 113.99600 * 180.02562 * 12 11 10 31 31 H 1.09002 * 113.61012 * 203.66373 * 13 10 9 32 32 H 1.08998 * 113.61954 * 334.57042 * 13 10 9 33 33 H 0.96704 * 113.99748 * 277.53265 * 16 14 13 34 34 H 1.09008 * 113.61186 * 25.43046 * 17 10 9 35 35 H 1.09004 * 113.61361 * 156.24583 * 17 10 9 36 36 H 1.07999 * 120.06139 * 179.97438 * 18 6 5 37 37 H 1.08003 * 119.93833 * 180.02562 * 19 18 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4291 0.0000 0.0000 3 14 2.0499 1.7565 0.0000 4 6 1.9314 -0.7104 1.2304 5 6 1.0731 -1.4946 1.9705 6 6 1.5403 -2.1528 3.1103 7 6 0.6248 -2.9943 3.9078 8 8 -0.5375 -3.1151 3.5721 9 7 1.0781 -3.6289 5.0070 10 6 0.1464 -4.3672 5.8632 11 6 -0.2823 -5.7058 5.2587 12 8 0.8767 -6.4851 4.9565 13 6 0.6043 -4.4690 7.3277 14 6 -0.1392 -3.1448 7.5699 15 1 -0.6753 -3.1122 8.5185 16 8 0.6657 -1.9854 7.3472 17 6 -1.0291 -3.5163 6.3720 18 6 2.8754 -2.0119 3.4940 19 6 3.7254 -1.2250 2.7464 20 6 3.2568 -0.5747 1.6153 21 9 4.0941 0.1949 0.8859 22 1 -0.3933 0.4417 0.7650 23 1 1.7923 -0.5137 -0.8900 24 1 1.5615 2.4680 -1.2085 25 1 1.5879 2.4586 1.2243 26 1 0.0402 -1.5965 1.6720 27 1 2.0213 -3.5966 5.2313 28 1 -0.9059 -6.2438 5.9727 29 1 -0.8484 -5.5269 4.3446 30 1 0.6798 -7.3488 4.5689 31 1 0.1734 -5.3158 7.8620 32 1 1.6843 -4.3928 7.4539 33 1 1.2276 -1.7467 8.0972 34 1 -1.2677 -2.6709 5.7266 35 1 -1.9070 -4.1025 6.6436 36 1 3.2416 -2.5184 4.3747 37 1 4.7584 -1.1156 3.0420 There are 54 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 54 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_18341542_12496548.mol2 37 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 08:59:52 Heat of formation + Delta-G solvation = -140.479358 kcal Electronic energy + Delta-G solvation = -24861.133917 eV Core-core repulsion = 20907.106722 eV Total energy + Delta-G solvation = -3954.027194 eV No. of doubly occupied orbitals = 54 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 298.109 amu Computer time = 0.65 seconds Orbital eigenvalues (eV) -50.30784 -41.93225 -40.60943 -39.07452 -37.72935 -37.56029 -35.95539 -34.16703 -32.57219 -31.79347 -28.69671 -27.09989 -27.03275 -25.22412 -23.31352 -23.19267 -21.62087 -20.34696 -19.37860 -18.58667 -18.39281 -18.23864 -17.88858 -17.68884 -17.03130 -16.78743 -16.54327 -16.17460 -15.80901 -15.74328 -15.58546 -15.15731 -15.05858 -14.81596 -14.34855 -14.13112 -13.90440 -13.69284 -13.51599 -13.34490 -13.20153 -12.77498 -12.69884 -12.37095 -12.21015 -11.85251 -11.52626 -11.17152 -11.06038 -10.98166 -10.64788 -10.07635 -9.94150 -9.70346 -4.74330 -0.44924 0.01634 1.24904 1.63686 1.73979 1.97038 2.05631 2.66480 2.89834 2.94728 2.99678 3.17769 3.34527 3.40055 3.51549 3.56625 3.62965 3.78543 3.93445 4.05721 4.12157 4.32910 4.38179 4.42439 4.50581 4.57100 4.60420 4.70554 4.74402 4.77562 4.86787 4.96418 5.01075 5.04314 5.11304 5.54724 5.62275 6.33462 6.52196 6.56558 6.61289 7.25099 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.527 6.527 2 C -0.073 4.073 3 Si 0.676 3.324 4 C -0.155 4.155 5 C -0.025 4.025 6 C -0.136 4.136 7 C 0.568 3.432 8 O -0.534 6.534 9 N -0.685 5.685 10 C 0.163 3.837 11 C 0.074 3.926 12 O -0.569 6.569 13 C -0.163 4.163 14 C 0.079 3.921 15 H 0.074 0.926 16 O -0.545 6.545 17 C -0.131 4.131 18 C -0.057 4.057 19 C -0.150 4.150 20 C 0.121 3.879 21 F -0.105 7.105 22 H 0.378 0.622 23 H 0.127 0.873 24 H -0.249 1.249 25 H -0.256 1.256 26 H 0.153 0.847 27 H 0.403 0.597 28 H 0.056 0.944 29 H 0.058 0.942 30 H 0.381 0.619 31 H 0.104 0.896 32 H 0.081 0.919 33 H 0.381 0.619 34 H 0.093 0.907 35 H 0.106 0.894 36 H 0.137 0.863 37 H 0.149 0.851 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.463 -2.107 5.161 6.562 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.333 6.333 2 C -0.182 4.182 3 Si 0.575 3.425 4 C -0.157 4.157 5 C -0.044 4.044 6 C -0.139 4.139 7 C 0.356 3.644 8 O -0.412 6.412 9 N -0.336 5.336 10 C 0.076 3.924 11 C -0.005 4.005 12 O -0.374 6.374 13 C -0.201 4.201 14 C 0.019 3.981 15 H 0.092 0.908 16 O -0.350 6.350 17 C -0.169 4.169 18 C -0.076 4.076 19 C -0.168 4.168 20 C 0.101 3.899 21 F -0.084 7.084 22 H 0.226 0.774 23 H 0.145 0.855 24 H -0.174 1.174 25 H -0.180 1.180 26 H 0.170 0.830 27 H 0.239 0.761 28 H 0.074 0.926 29 H 0.077 0.923 30 H 0.228 0.772 31 H 0.122 0.878 32 H 0.100 0.900 33 H 0.228 0.772 34 H 0.112 0.888 35 H 0.124 0.876 36 H 0.155 0.845 37 H 0.166 0.834 Dipole moment (debyes) X Y Z Total from point charges 2.521 -1.116 4.031 4.884 hybrid contribution -0.404 -0.719 0.893 1.215 sum 2.117 -1.835 4.924 5.665 Atomic orbital electron populations 1.86604 1.17086 1.80129 1.49505 1.24931 0.84521 1.11171 0.97589 0.94761 0.92761 0.73609 0.81372 1.20358 0.92949 1.02187 1.00180 1.20955 1.00873 0.91316 0.91237 1.19982 0.94303 1.01797 0.97847 1.18015 0.87337 0.79015 0.80059 1.90780 1.17901 1.63136 1.69358 1.45197 1.11201 1.52077 1.25101 1.21159 0.91646 0.90071 0.89550 1.22498 0.87709 0.90549 0.99774 1.86437 1.32568 1.33039 1.85380 1.23949 1.02265 0.99408 0.94525 1.22711 0.92432 0.84807 0.98125 0.90796 1.86516 1.59229 1.45084 1.44220 1.23355 0.96241 1.00578 0.96690 1.21178 0.91900 0.96000 0.98522 1.21077 1.01805 0.99168 0.94776 1.17631 0.87246 0.93420 0.91606 1.91189 1.69801 1.71375 1.76013 0.77408 0.85532 1.17360 1.18018 0.82979 0.76122 0.92575 0.92334 0.77241 0.87755 0.90028 0.77179 0.88825 0.87584 0.84484 0.83364 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.53 -1.11 11.64 -35.23 -0.41 -1.52 16 2 C -0.07 -0.07 2.96 36.00 0.11 0.04 16 3 Si 0.68 0.53 29.58 -169.99 -5.03 -4.49 16 4 C -0.16 -0.17 5.13 -104.62 -0.54 -0.70 16 5 C -0.03 -0.05 8.78 -39.20 -0.34 -0.40 16 6 C -0.14 -0.22 5.87 -104.97 -0.62 -0.84 16 7 C 0.57 1.74 7.28 -12.39 -0.09 1.65 16 8 O -0.53 -3.23 14.26 5.30 0.08 -3.15 16 9 N -0.68 -0.50 4.45 -47.82 -0.21 -0.71 16 10 C 0.16 0.04 0.76 -131.01 -0.10 -0.06 16 11 C 0.07 0.02 6.42 37.16 0.24 0.26 16 12 O -0.57 -0.26 13.54 -35.23 -0.48 -0.74 16 13 C -0.16 0.32 7.23 -25.91 -0.19 0.13 16 14 C 0.08 -0.11 5.27 -25.92 -0.14 -0.25 16 15 H 0.07 -0.20 8.14 -51.93 -0.42 -0.63 16 16 O -0.55 0.38 13.09 -35.23 -0.46 -0.08 16 17 C -0.13 -0.05 6.71 -25.92 -0.17 -0.22 16 18 C -0.06 0.05 9.53 -39.20 -0.37 -0.32 16 19 C -0.15 0.17 10.01 -39.58 -0.40 -0.22 16 20 C 0.12 0.01 6.67 -39.27 -0.26 -0.25 16 21 F -0.11 0.05 13.71 2.25 0.03 0.08 16 22 H 0.38 -0.23 8.42 45.56 0.38 0.16 16 23 H 0.13 0.02 7.96 -51.93 -0.41 -0.39 16 24 H -0.25 -0.86 7.11 56.52 0.40 -0.46 16 25 H -0.26 -0.76 7.11 56.52 0.40 -0.36 16 26 H 0.15 0.42 6.66 -52.49 -0.35 0.07 16 27 H 0.40 -0.45 6.80 -40.82 -0.28 -0.72 16 28 H 0.06 -0.09 8.09 -51.93 -0.42 -0.51 16 29 H 0.06 0.13 7.52 -51.93 -0.39 -0.26 16 30 H 0.38 -1.20 9.12 45.56 0.42 -0.78 16 31 H 0.10 -0.31 8.06 -51.93 -0.42 -0.73 16 32 H 0.08 -0.18 8.13 -51.93 -0.42 -0.60 16 33 H 0.38 -1.79 9.12 45.56 0.42 -1.38 16 34 H 0.09 0.32 6.71 -51.92 -0.35 -0.03 16 35 H 0.11 -0.15 8.10 -51.93 -0.42 -0.57 16 36 H 0.14 -0.47 6.41 -52.49 -0.34 -0.80 16 37 H 0.15 -0.52 8.06 -52.48 -0.42 -0.94 16 LS Contribution 314.41 15.07 4.74 4.74 Total: 0.00 -8.77 314.41 -7.24 -16.01 By element: Atomic # 1 Polarization: -6.31 SS G_CDS: -2.63 Total: -8.94 kcal Atomic # 6 Polarization: 1.68 SS G_CDS: -2.87 Total: -1.19 kcal Atomic # 7 Polarization: -0.50 SS G_CDS: -0.21 Total: -0.71 kcal Atomic # 8 Polarization: -4.22 SS G_CDS: -1.27 Total: -5.50 kcal Atomic # 9 Polarization: 0.05 SS G_CDS: 0.03 Total: 0.08 kcal Atomic # 14 Polarization: 0.53 SS G_CDS: -5.03 Total: -4.49 kcal Total LS contribution 4.74 Total: 4.74 kcal Total: -8.77 -7.24 -16.01 kcal The number of atoms in the molecule is 37 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_18341542_12496548.mol2 37 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -124.471 kcal (2) G-P(sol) polarization free energy of solvation -8.768 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -133.239 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.240 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -16.009 kcal (6) G-S(sol) free energy of system = (1) + (5) -140.479 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.65 seconds