Wall clock time and date at job start Sun Mar 7 2021 08:59:55 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42901 * 1 3 3 Si 1.86291 * 109.47228 * 2 1 4 4 C 1.50698 * 109.46870 * 120.00402 * 2 1 3 5 5 C 1.35091 * 126.07418 * 255.34585 * 4 2 1 6 6 N 1.35040 * 107.98016 * 180.12441 * 5 4 2 7 7 C 1.46498 * 125.93235 * 179.83755 * 6 5 4 8 8 C 1.50696 * 109.47060 * 124.71774 * 7 6 5 9 9 O 1.21276 * 120.00504 * 0.02562 * 8 7 6 10 10 N 1.34782 * 119.99704 * 180.02562 * 8 7 6 11 11 C 1.46503 * 119.99764 * 184.94621 * 10 8 7 12 12 C 1.53001 * 112.84991 * 284.20924 * 11 10 8 13 13 O 1.42899 * 109.46920 * 312.72786 * 12 11 10 14 14 C 1.53784 * 113.61552 * 55.40716 * 11 10 8 15 15 C 1.53778 * 87.07989 * 139.98106 * 14 11 10 16 16 H 1.08993 * 113.61458 * 89.11827 * 15 14 11 17 17 O 1.42902 * 113.61068 * 220.02030 * 15 14 11 18 18 C 1.53777 * 113.61149 * 152.90176 * 11 10 8 19 19 N 1.40071 * 108.13837 * 359.57670 * 6 5 4 20 20 C 1.31628 * 108.10766 * 0.26151 * 19 6 5 21 21 C 1.48415 * 126.03720 * 179.97438 * 20 19 6 22 22 C 1.39322 * 120.12042 * 144.75114 * 21 20 19 23 23 C 1.38021 * 119.87814 * 179.72256 * 22 21 20 24 24 C 1.38314 * 120.12151 * 0.55069 * 23 22 21 25 25 C 1.38321 * 120.23936 * 359.72256 * 24 23 22 26 26 C 1.38014 * 120.12210 * 0.02562 * 25 24 23 27 27 H 0.96703 * 113.99826 * 59.99862 * 1 2 3 28 28 H 1.08999 * 109.46623 * 239.99847 * 2 1 3 29 29 H 1.48497 * 110.00307 * 298.67875 * 3 2 1 30 30 H 1.48501 * 110.00225 * 60.00179 * 3 2 1 31 31 H 1.08005 * 126.00919 * 0.02562 * 5 4 2 32 32 H 1.09004 * 109.46798 * 4.71833 * 7 6 5 33 33 H 1.09003 * 109.46992 * 244.72299 * 7 6 5 34 34 H 0.97001 * 119.99825 * 4.94321 * 10 8 7 35 35 H 1.08998 * 109.46692 * 72.72260 * 12 11 10 36 36 H 1.08991 * 109.47176 * 192.72445 * 12 11 10 37 37 H 0.96706 * 113.99955 * 180.02562 * 13 12 11 38 38 H 1.09002 * 113.61366 * 254.52823 * 14 11 10 39 39 H 1.09004 * 113.61199 * 25.43080 * 14 11 10 40 40 H 0.96699 * 113.99695 * 180.02562 * 17 15 14 41 41 H 1.08995 * 113.62102 * 334.56795 * 18 11 10 42 42 H 1.09009 * 113.61345 * 105.38983 * 18 11 10 43 43 H 1.08000 * 120.05675 * 359.97055 * 22 21 20 44 44 H 1.08005 * 119.93739 * 180.27504 * 23 22 21 45 45 H 1.08001 * 119.88167 * 179.74768 * 24 23 22 46 46 H 1.08004 * 119.93913 * 180.02562 * 25 24 23 47 47 H 1.08000 * 120.06790 * 180.02562 * 26 25 24 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9313 -0.7105 1.2304 5 6 2.4568 -0.1247 2.3284 6 7 2.7872 -1.0991 3.2030 7 6 3.3915 -0.9011 4.5228 8 6 2.5374 -1.5660 5.5713 9 8 1.5240 -2.1484 5.2480 10 7 2.8999 -1.5134 6.8684 11 6 2.1305 -2.2498 7.8743 12 6 0.8003 -1.5754 8.2159 13 8 1.0179 -0.1818 8.4451 14 6 1.9998 -3.7520 7.5719 15 6 2.2055 -3.9927 9.0767 16 1 1.2786 -3.9890 9.6502 17 8 3.0354 -5.1189 9.3680 18 6 2.9552 -2.6504 9.1089 19 7 2.4461 -2.3318 2.6318 20 6 1.9299 -2.1028 1.4429 21 6 1.4344 -3.1304 0.4935 22 6 0.3291 -2.8635 -0.3116 23 6 -0.1240 -3.8206 -1.1968 24 6 0.5102 -5.0472 -1.2774 25 6 1.6045 -5.3196 -0.4764 26 6 2.0691 -4.3679 0.4086 27 1 -0.3933 0.4417 -0.7651 28 1 1.7923 -0.5139 -0.8900 29 1 1.5880 2.4585 -1.2242 30 1 1.5616 2.4678 1.2085 31 1 2.5909 0.9363 2.4794 32 1 3.4612 0.1661 4.7340 33 1 4.3893 -1.3397 4.5350 34 1 3.6702 -0.9880 7.1357 35 1 0.1048 -1.7030 7.3864 36 1 0.3823 -2.0304 9.1138 37 1 0.2156 0.3102 8.6676 38 1 1.0114 -4.0410 7.2145 39 1 2.8064 -4.1445 6.9526 40 1 3.1682 -5.2757 10.3130 41 1 4.0230 -2.7417 8.9100 42 1 2.7392 -2.0492 9.9922 43 1 -0.1698 -1.9079 -0.2459 44 1 -0.9780 -3.6131 -1.8245 45 1 0.1499 -5.7948 -1.9685 46 1 2.0962 -6.2788 -0.5436 47 1 2.9238 -4.5813 1.0333 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_18341542_12622748.mol2 47 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 08:59:55 Heat of formation + Delta-G solvation = -9.346511 kcal Electronic energy + Delta-G solvation = -32552.164295 eV Core-core repulsion = 28091.134322 eV Total energy + Delta-G solvation = -4461.029972 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 360.156 amu Computer time = 1.41 seconds Orbital eigenvalues (eV) -42.36776 -41.66406 -39.79018 -39.38915 -37.81458 -37.60877 -36.18180 -34.73368 -33.98981 -32.23238 -31.65883 -31.27100 -28.97600 -28.01255 -27.04011 -25.87038 -24.49464 -23.54242 -23.25371 -21.76265 -21.33417 -20.61464 -20.07900 -19.02933 -18.54404 -18.43033 -18.21451 -18.11564 -17.41007 -16.79994 -16.69578 -16.35768 -16.23987 -15.78305 -15.69698 -15.49633 -15.37760 -14.96931 -14.81510 -14.71447 -14.34811 -14.15875 -14.00443 -13.82332 -13.61214 -13.54651 -13.54137 -13.27049 -13.24073 -12.80119 -12.70385 -12.27864 -11.99259 -11.96728 -11.80311 -11.71569 -11.31837 -11.25830 -11.02711 -10.87015 -10.43712 -10.28613 -10.12678 -9.62997 -9.55862 -9.09722 -4.94886 0.31605 0.72289 0.88298 1.30587 1.37612 1.56021 1.60418 1.88783 1.99552 2.03117 2.85334 3.07501 3.12084 3.24822 3.37952 3.52397 3.54950 3.61648 3.66460 3.72080 3.85263 3.91537 3.93242 4.15301 4.17360 4.23976 4.26928 4.29026 4.42860 4.50221 4.51757 4.58432 4.66154 4.69707 4.81577 4.85713 4.94171 4.97370 4.97987 5.01916 5.21258 5.38899 5.43188 5.51212 5.81054 5.83985 5.86365 5.93669 6.27272 6.40713 6.50896 6.53948 6.59473 6.79866 7.17326 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.533 6.533 2 C -0.036 4.036 3 Si 0.683 3.317 4 C -0.205 4.205 5 C 0.066 3.934 6 N -0.357 5.357 7 C 0.117 3.883 8 C 0.502 3.498 9 O -0.501 6.501 10 N -0.706 5.706 11 C 0.160 3.840 12 C 0.084 3.916 13 O -0.567 6.567 14 C -0.115 4.115 15 C 0.077 3.923 16 H 0.087 0.913 17 O -0.554 6.554 18 C -0.164 4.164 19 N -0.248 5.248 20 C 0.131 3.869 21 C -0.017 4.017 22 C -0.103 4.103 23 C -0.126 4.126 24 C -0.113 4.113 25 C -0.126 4.126 26 C -0.091 4.091 27 H 0.377 0.623 28 H 0.075 0.925 29 H -0.259 1.259 30 H -0.255 1.255 31 H 0.178 0.822 32 H 0.128 0.872 33 H 0.119 0.881 34 H 0.404 0.596 35 H 0.061 0.939 36 H 0.057 0.943 37 H 0.383 0.617 38 H 0.085 0.915 39 H 0.099 0.901 40 H 0.381 0.619 41 H 0.100 0.900 42 H 0.082 0.918 43 H 0.151 0.849 44 H 0.123 0.877 45 H 0.122 0.878 46 H 0.124 0.876 47 H 0.124 0.876 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.516 3.909 2.508 5.825 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.341 6.341 2 C -0.147 4.147 3 Si 0.584 3.416 4 C -0.217 4.217 5 C -0.078 4.078 6 N -0.138 5.138 7 C -0.009 4.009 8 C 0.285 3.715 9 O -0.374 6.374 10 N -0.360 5.360 11 C 0.073 3.927 12 C 0.005 3.995 13 O -0.373 6.373 14 C -0.153 4.153 15 C 0.017 3.983 16 H 0.105 0.895 17 O -0.360 6.360 18 C -0.202 4.202 19 N -0.069 5.069 20 C -0.035 4.035 21 C -0.019 4.019 22 C -0.122 4.122 23 C -0.144 4.144 24 C -0.131 4.131 25 C -0.144 4.144 26 C -0.110 4.110 27 H 0.225 0.775 28 H 0.093 0.907 29 H -0.184 1.184 30 H -0.180 1.180 31 H 0.194 0.806 32 H 0.145 0.855 33 H 0.137 0.863 34 H 0.239 0.761 35 H 0.079 0.921 36 H 0.075 0.925 37 H 0.230 0.770 38 H 0.103 0.897 39 H 0.118 0.882 40 H 0.229 0.771 41 H 0.118 0.882 42 H 0.101 0.899 43 H 0.169 0.831 44 H 0.141 0.859 45 H 0.140 0.860 46 H 0.142 0.858 47 H 0.142 0.858 Dipole moment (debyes) X Y Z Total from point charges 3.708 2.959 3.074 5.653 hybrid contribution -1.558 1.002 -0.033 1.852 sum 2.150 3.961 3.041 5.436 Atomic orbital electron populations 1.86582 1.18645 1.79010 1.49814 1.23961 0.83595 1.10062 0.97034 0.95187 0.91465 0.74437 0.80529 1.19224 1.12085 0.92459 0.97882 1.22195 1.00321 0.95294 0.90026 1.47779 1.48641 1.04336 1.13068 1.21501 0.97140 1.03522 0.78714 1.20499 0.86497 0.81296 0.83189 1.90817 1.24376 1.41473 1.80689 1.45606 1.32781 1.51940 1.05629 1.21348 0.91594 0.90862 0.88906 1.22275 0.95352 0.82071 0.99844 1.86411 1.37778 1.19914 1.93153 1.23311 1.04455 0.92351 0.95178 1.23233 0.93187 0.84717 0.97144 0.89543 1.86559 1.70792 1.48617 1.29989 1.24019 1.01004 0.97722 0.97456 1.77781 1.19241 1.01798 1.08036 1.20617 0.98296 0.92344 0.92204 1.17778 0.96526 0.92015 0.95558 1.21885 0.95111 1.01006 0.94166 1.21117 1.00295 0.93777 0.99260 1.21279 0.95807 0.97069 0.98994 1.21083 0.97297 0.99344 0.96686 1.21227 0.99695 0.92288 0.97818 0.77533 0.90728 1.18417 1.17973 0.80552 0.85459 0.86331 0.76110 0.92109 0.92484 0.76998 0.89678 0.88226 0.77134 0.88194 0.89925 0.83142 0.85859 0.86031 0.85817 0.85815 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.53 -0.84 10.08 -35.23 -0.36 -1.19 16 2 C -0.04 -0.03 1.99 36.00 0.07 0.04 16 3 Si 0.68 -0.67 30.79 -169.99 -5.23 -5.91 16 4 C -0.21 -0.67 5.37 -104.76 -0.56 -1.23 16 5 C 0.07 0.12 9.96 -17.26 -0.17 -0.06 16 6 N -0.36 -1.02 3.40 -62.58 -0.21 -1.23 16 7 C 0.12 -0.12 6.99 -5.20 -0.04 -0.15 16 8 C 0.50 0.96 7.53 -10.98 -0.08 0.88 16 9 O -0.50 -3.33 14.38 5.56 0.08 -3.25 16 10 N -0.71 0.32 4.94 -46.85 -0.23 0.09 16 11 C 0.16 0.03 0.92 -131.00 -0.12 -0.09 16 12 C 0.08 0.02 6.35 37.16 0.24 0.25 16 13 O -0.57 0.00 13.39 -35.23 -0.47 -0.47 16 14 C -0.11 -0.19 6.03 -25.92 -0.16 -0.35 16 15 C 0.08 -0.03 4.87 -25.92 -0.13 -0.16 16 16 H 0.09 -0.17 7.67 -51.93 -0.40 -0.57 16 17 O -0.55 -0.33 13.67 -35.23 -0.48 -0.81 16 18 C -0.16 0.22 7.22 -25.92 -0.19 0.04 16 19 N -0.25 -1.53 11.63 33.43 0.39 -1.14 16 20 C 0.13 0.73 6.74 -82.78 -0.56 0.17 16 21 C -0.02 -0.09 5.80 -104.90 -0.61 -0.69 16 22 C -0.10 -0.42 8.94 -39.26 -0.35 -0.77 16 23 C -0.13 -0.34 10.03 -39.63 -0.40 -0.74 16 24 C -0.11 -0.27 10.04 -39.52 -0.40 -0.67 16 25 C -0.13 -0.37 10.03 -39.63 -0.40 -0.76 16 26 C -0.09 -0.39 9.75 -39.26 -0.38 -0.78 16 27 H 0.38 -0.99 8.74 45.56 0.40 -0.59 16 28 H 0.07 0.00 7.84 -51.93 -0.41 -0.40 16 29 H -0.26 -0.26 7.11 56.52 0.40 0.14 16 30 H -0.26 -0.37 7.03 56.52 0.40 0.03 16 31 H 0.18 -0.30 6.36 -52.48 -0.33 -0.63 16 32 H 0.13 -0.61 8.07 -51.93 -0.42 -1.03 16 33 H 0.12 -0.40 8.14 -51.93 -0.42 -0.82 16 34 H 0.40 -1.29 8.77 -40.82 -0.36 -1.65 16 35 H 0.06 0.14 7.72 -51.93 -0.40 -0.27 16 36 H 0.06 -0.09 7.36 -51.93 -0.38 -0.47 16 37 H 0.38 -1.33 9.12 45.56 0.42 -0.92 16 38 H 0.08 0.24 8.10 -51.93 -0.42 -0.18 16 39 H 0.10 0.33 8.14 -51.93 -0.42 -0.09 16 40 H 0.38 -1.42 9.12 45.56 0.42 -1.01 16 41 H 0.10 -0.14 8.14 -51.93 -0.42 -0.57 16 42 H 0.08 -0.16 8.10 -51.92 -0.42 -0.58 16 43 H 0.15 0.54 4.52 -52.49 -0.24 0.31 16 44 H 0.12 0.07 8.06 -52.48 -0.42 -0.35 16 45 H 0.12 0.04 8.06 -52.49 -0.42 -0.39 16 46 H 0.12 0.11 8.06 -52.48 -0.42 -0.31 16 47 H 0.12 0.48 8.06 -52.49 -0.42 0.06 16 LS Contribution 393.14 15.07 5.92 5.92 Total: 0.00 -13.83 393.14 -9.53 -23.36 By element: Atomic # 1 Polarization: -5.58 SS G_CDS: -4.71 Total: -10.30 kcal Atomic # 6 Polarization: -0.85 SS G_CDS: -4.23 Total: -5.07 kcal Atomic # 7 Polarization: -2.22 SS G_CDS: -0.06 Total: -2.28 kcal Atomic # 8 Polarization: -4.50 SS G_CDS: -1.23 Total: -5.73 kcal Atomic # 14 Polarization: -0.67 SS G_CDS: -5.23 Total: -5.91 kcal Total LS contribution 5.92 Total: 5.92 kcal Total: -13.83 -9.53 -23.36 kcal The number of atoms in the molecule is 47 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_18341542_12622748.mol2 47 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 14.011 kcal (2) G-P(sol) polarization free energy of solvation -13.827 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 0.184 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.531 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -23.358 kcal (6) G-S(sol) free energy of system = (1) + (5) -9.347 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.41 seconds