Wall clock time and date at job start Sun Mar 7 2021 09:00:09 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42902 * 1 3 3 Si 1.86306 * 109.46853 * 2 1 4 4 C 1.50698 * 109.46995 * 119.99353 * 2 1 3 5 5 C 1.38337 * 119.87447 * 245.28143 * 4 2 1 6 6 C 1.38004 * 120.12679 * 180.28215 * 5 4 2 7 7 C 1.39395 * 119.87310 * 359.44102 * 6 5 4 8 8 C 1.48278 * 120.12911 * 180.25331 * 7 6 5 9 9 C 1.39503 * 119.97415 * 359.73115 * 8 7 6 10 10 C 1.37667 * 120.02519 * 179.76009 * 9 8 7 11 11 C 1.39708 * 119.97315 * 0.48726 * 10 9 8 12 12 C 1.47718 * 120.02777 * 179.74154 * 11 10 9 13 13 O 1.21568 * 120.00478 * 180.02562 * 12 11 10 14 14 N 1.34778 * 119.99578 * 0.02562 * 12 11 10 15 15 C 1.46501 * 120.00030 * 174.96836 * 14 12 11 16 16 C 1.52999 * 112.84712 * 293.71186 * 15 14 12 17 17 O 1.42901 * 109.47310 * 305.09293 * 16 15 14 18 18 C 1.53776 * 113.61230 * 64.90281 * 15 14 12 19 19 C 1.53781 * 87.07894 * 139.98239 * 18 15 14 20 20 H 1.09005 * 113.61364 * 89.20547 * 19 18 15 21 21 O 1.42905 * 113.61712 * 220.01557 * 19 18 15 22 22 C 1.53778 * 87.08406 * 334.56990 * 19 18 15 23 23 C 1.39708 * 119.95022 * 359.76629 * 11 10 9 24 24 C 1.37668 * 119.98044 * 359.97438 * 23 11 10 25 25 C 1.39410 * 119.74553 * 0.28102 * 7 6 5 26 26 C 1.37999 * 119.86655 * 359.97438 * 25 7 6 27 27 H 0.96699 * 113.99838 * 60.00904 * 1 2 3 28 28 H 1.08996 * 109.47719 * 239.99839 * 2 1 3 29 29 H 1.48501 * 109.99696 * 298.67756 * 3 2 1 30 30 H 1.48496 * 110.00103 * 59.99339 * 3 2 1 31 31 H 1.08004 * 119.93490 * 0.02562 * 5 4 2 32 32 H 1.08003 * 120.06120 * 179.71790 * 6 5 4 33 33 H 1.07997 * 119.98791 * 0.02562 * 9 8 7 34 34 H 1.07993 * 120.01287 * 180.24651 * 10 9 8 35 35 H 0.96997 * 119.99962 * 354.97145 * 14 12 11 36 36 H 1.08998 * 109.47578 * 65.09342 * 16 15 14 37 37 H 1.09006 * 109.47142 * 185.09639 * 16 15 14 38 38 H 0.96703 * 114.00109 * 180.02562 * 17 16 15 39 39 H 1.09001 * 113.61845 * 254.52845 * 18 15 14 40 40 H 1.08999 * 113.61577 * 25.35265 * 18 15 14 41 41 H 0.96695 * 113.99652 * 179.97438 * 21 19 18 42 42 H 1.08998 * 113.60988 * 270.88856 * 22 19 18 43 43 H 1.08991 * 113.61759 * 139.97852 * 22 19 18 44 44 H 1.08010 * 120.01435 * 179.97438 * 23 11 10 45 45 H 1.07994 * 119.99326 * 180.02562 * 24 23 11 46 46 H 1.07999 * 120.06467 * 180.02562 * 25 7 6 47 47 H 1.08001 * 119.93166 * 180.02562 * 26 25 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9313 -0.7103 1.2305 5 6 2.6339 -0.0077 2.1931 6 6 3.1013 -0.6542 3.3192 7 6 2.8542 -2.0152 3.4913 8 6 3.3489 -2.7142 4.7018 9 6 4.0680 -2.0105 5.6681 10 6 4.5235 -2.6573 6.7947 11 6 4.2742 -4.0214 6.9652 12 6 4.7674 -4.7179 8.1709 13 8 4.5507 -5.9049 8.3187 14 7 5.4578 -4.0373 9.1073 15 6 5.8515 -4.7000 10.3531 16 6 4.6552 -5.0764 11.2295 17 8 3.8613 -3.9142 11.4767 18 6 6.8520 -5.8499 10.1496 19 6 7.5613 -5.3528 11.4202 20 1 7.1783 -5.8002 12.3375 21 8 8.9871 -5.3974 11.3346 22 6 6.9688 -3.9671 11.1143 23 6 3.5586 -4.7263 5.9943 24 6 3.0993 -4.0763 4.8710 25 6 2.1406 -2.7168 2.5207 26 6 1.6827 -2.0609 1.3962 27 1 -0.3933 0.4416 -0.7651 28 1 1.7924 -0.5138 -0.8899 29 1 1.5878 2.4585 -1.2243 30 1 1.5613 2.4680 1.2084 31 1 2.8206 1.0478 2.0610 32 1 3.6537 -0.1056 4.0679 33 1 4.2637 -0.9568 5.5344 34 1 5.0767 -2.1114 7.5445 35 1 5.6939 -3.1087 8.9563 36 1 4.0518 -5.8264 10.7181 37 1 5.0117 -5.4810 12.1768 38 1 3.0839 -4.0787 12.0278 39 1 6.4076 -6.8394 10.2564 40 1 7.4528 -5.7511 9.2455 41 1 9.4388 -5.0856 12.1307 42 1 7.6025 -3.3529 10.4746 43 1 6.6186 -3.4368 11.9997 44 1 3.3656 -5.7810 6.1249 45 1 2.5457 -4.6210 4.1206 46 1 1.9458 -3.7713 2.6490 47 1 1.1294 -2.6033 0.6438 There are 65 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 65 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_18341542_13158362.mol2 47 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 09:00:09 Heat of formation + Delta-G solvation = -72.769447 kcal Electronic energy + Delta-G solvation = -30297.573607 eV Core-core repulsion = 25991.956710 eV Total energy + Delta-G solvation = -4305.616897 eV No. of doubly occupied orbitals = 65 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 356.150 amu Computer time = 1.02 seconds Orbital eigenvalues (eV) -41.83164 -41.02185 -40.06932 -38.88460 -37.66697 -37.52070 -36.15206 -34.47279 -33.68850 -32.55986 -31.56220 -30.82920 -28.25829 -27.05870 -26.92714 -24.89266 -24.63315 -23.61264 -22.57032 -22.10801 -21.15283 -20.07389 -19.19515 -18.95446 -18.57887 -18.20531 -18.00899 -17.11931 -16.93938 -16.61364 -16.48491 -16.22949 -15.80295 -15.65636 -15.43004 -15.28061 -14.97790 -14.87134 -14.83054 -14.68830 -14.30959 -14.09764 -13.95809 -13.77314 -13.71875 -13.50675 -13.24395 -13.19747 -12.96578 -12.80582 -12.50839 -12.07875 -11.91576 -11.87680 -11.76061 -11.61360 -11.19387 -10.99584 -10.71777 -10.63074 -10.49217 -10.05764 -10.04710 -9.96141 -9.04764 -5.01005 -0.64155 0.35931 0.39565 0.54963 1.22946 1.54996 1.89617 1.92067 2.07820 2.61892 2.87918 3.00955 3.18341 3.28209 3.30493 3.46535 3.58121 3.60185 3.67332 3.74146 3.82746 3.84766 3.93641 3.98844 4.02336 4.19618 4.24058 4.25308 4.31188 4.33798 4.39008 4.54557 4.63531 4.64593 4.68007 4.69662 4.87481 4.89799 4.90028 4.98238 5.04312 5.06351 5.14405 5.20437 5.30511 5.41378 5.50143 5.51216 5.65868 5.81115 5.90570 6.38483 6.52383 6.57625 6.61544 7.26552 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.536 6.536 2 C -0.078 4.078 3 Si 0.683 3.317 4 C -0.067 4.067 5 C -0.113 4.113 6 C -0.100 4.100 7 C -0.049 4.049 8 C -0.017 4.017 9 C -0.118 4.118 10 C -0.080 4.080 11 C -0.135 4.135 12 C 0.564 3.436 13 O -0.534 6.534 14 N -0.704 5.704 15 C 0.158 3.842 16 C 0.083 3.917 17 O -0.567 6.567 18 C -0.118 4.118 19 C 0.077 3.923 20 H 0.087 0.913 21 O -0.555 6.555 22 C -0.164 4.164 23 C -0.054 4.054 24 C -0.119 4.119 25 C -0.105 4.105 26 C -0.089 4.089 27 H 0.380 0.620 28 H 0.077 0.923 29 H -0.261 1.261 30 H -0.255 1.255 31 H 0.130 0.870 32 H 0.132 0.868 33 H 0.134 0.866 34 H 0.128 0.872 35 H 0.402 0.598 36 H 0.064 0.936 37 H 0.058 0.942 38 H 0.383 0.617 39 H 0.085 0.915 40 H 0.099 0.901 41 H 0.381 0.619 42 H 0.099 0.901 43 H 0.084 0.916 44 H 0.139 0.861 45 H 0.134 0.866 46 H 0.130 0.870 47 H 0.128 0.872 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.197 2.865 0.624 3.664 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.343 6.343 2 C -0.188 4.188 3 Si 0.585 3.415 4 C -0.067 4.067 5 C -0.131 4.131 6 C -0.118 4.118 7 C -0.049 4.049 8 C -0.017 4.017 9 C -0.136 4.136 10 C -0.099 4.099 11 C -0.139 4.139 12 C 0.352 3.648 13 O -0.411 6.411 14 N -0.356 5.356 15 C 0.071 3.929 16 C 0.004 3.996 17 O -0.372 6.372 18 C -0.156 4.156 19 C 0.018 3.982 20 H 0.105 0.895 21 O -0.360 6.360 22 C -0.202 4.202 23 C -0.073 4.073 24 C -0.136 4.136 25 C -0.122 4.122 26 C -0.107 4.107 27 H 0.228 0.772 28 H 0.095 0.905 29 H -0.186 1.186 30 H -0.179 1.179 31 H 0.147 0.853 32 H 0.150 0.850 33 H 0.151 0.849 34 H 0.146 0.854 35 H 0.238 0.762 36 H 0.083 0.917 37 H 0.076 0.924 38 H 0.230 0.770 39 H 0.104 0.896 40 H 0.118 0.882 41 H 0.229 0.771 42 H 0.117 0.883 43 H 0.102 0.898 44 H 0.157 0.843 45 H 0.152 0.848 46 H 0.148 0.852 47 H 0.146 0.854 Dipole moment (debyes) X Y Z Total from point charges 2.244 2.588 0.346 3.443 hybrid contribution -1.427 0.318 0.292 1.491 sum 0.817 2.905 0.638 3.085 Atomic orbital electron populations 1.86596 1.17722 1.80183 1.49792 1.24832 0.84539 1.11063 0.98326 0.95031 0.91645 0.74599 0.80254 1.19349 0.98230 0.94130 0.95028 1.20938 0.98805 0.99541 0.93778 1.21176 0.99552 0.93544 0.97539 1.18812 0.98814 0.93482 0.93785 1.18983 0.96154 0.93314 0.93259 1.21160 0.98515 1.00357 0.93588 1.21205 0.98127 0.93243 0.97330 1.19972 1.03314 0.94302 0.96265 1.18245 0.77415 0.86552 0.82611 1.90768 1.57232 1.14797 1.78317 1.45663 1.57336 1.15569 1.16993 1.21347 0.91928 0.95232 0.84370 1.22249 0.91928 0.88100 0.97352 1.86435 1.41939 1.34062 1.74813 1.23357 0.95164 0.98712 0.98406 1.23239 0.81203 0.95324 0.98481 0.89500 1.86551 1.17632 1.88471 1.43386 1.23990 0.96513 0.98402 1.01295 1.21212 0.93788 1.00608 0.91710 1.21237 1.00651 0.93652 0.98105 1.21312 0.97317 1.00180 0.93427 1.20951 0.98324 0.93810 0.97655 0.77187 0.90466 1.18622 1.17949 0.85262 0.85032 0.84868 0.85442 0.76166 0.91734 0.92411 0.77005 0.89633 0.88218 0.77145 0.88305 0.89780 0.84313 0.84838 0.85209 0.85422 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 -0.63 12.81 -35.23 -0.45 -1.08 16 2 C -0.08 0.01 2.79 36.00 0.10 0.11 16 3 Si 0.68 -0.72 29.85 -169.99 -5.07 -5.79 16 4 C -0.07 -0.07 5.39 -104.55 -0.56 -0.64 16 5 C -0.11 -0.04 8.65 -39.63 -0.34 -0.39 16 6 C -0.10 -0.02 9.43 -39.24 -0.37 -0.39 16 7 C -0.05 -0.05 5.88 -104.90 -0.62 -0.66 16 8 C -0.02 -0.02 5.88 -104.82 -0.62 -0.63 16 9 C -0.12 0.01 9.41 -39.32 -0.37 -0.36 16 10 C -0.08 0.00 9.52 -39.24 -0.37 -0.37 16 11 C -0.14 -0.27 5.88 -104.93 -0.62 -0.89 16 12 C 0.56 1.80 7.42 -12.39 -0.09 1.71 16 13 O -0.53 -3.23 14.75 5.31 0.08 -3.15 16 14 N -0.70 -0.67 5.07 -47.83 -0.24 -0.91 16 15 C 0.16 0.10 0.85 -131.01 -0.11 -0.01 16 16 C 0.08 0.03 6.20 37.16 0.23 0.26 16 17 O -0.57 -0.31 13.53 -35.23 -0.48 -0.79 16 18 C -0.12 -0.16 6.40 -25.92 -0.17 -0.32 16 19 C 0.08 -0.04 4.86 -25.92 -0.13 -0.17 16 20 H 0.09 -0.19 7.61 -51.93 -0.40 -0.58 16 21 O -0.56 -0.25 13.67 -35.23 -0.48 -0.73 16 22 C -0.16 0.16 7.22 -25.92 -0.19 -0.03 16 23 C -0.05 -0.11 9.58 -39.24 -0.38 -0.48 16 24 C -0.12 -0.11 9.41 -39.32 -0.37 -0.48 16 25 C -0.10 -0.08 9.43 -39.23 -0.37 -0.45 16 26 C -0.09 -0.10 9.67 -39.63 -0.38 -0.48 16 27 H 0.38 -1.07 8.74 45.56 0.40 -0.67 16 28 H 0.08 -0.14 7.96 -51.93 -0.41 -0.56 16 29 H -0.26 -0.26 7.11 56.52 0.40 0.14 16 30 H -0.25 -0.51 7.04 56.52 0.40 -0.11 16 31 H 0.13 -0.17 4.85 -52.48 -0.25 -0.42 16 32 H 0.13 -0.27 6.19 -52.48 -0.33 -0.59 16 33 H 0.13 -0.30 6.19 -52.49 -0.32 -0.63 16 34 H 0.13 -0.32 6.40 -52.49 -0.34 -0.65 16 35 H 0.40 -0.44 6.74 -40.82 -0.28 -0.71 16 36 H 0.06 0.14 7.20 -51.93 -0.37 -0.24 16 37 H 0.06 -0.09 7.32 -51.93 -0.38 -0.47 16 38 H 0.38 -1.22 9.12 45.56 0.42 -0.80 16 39 H 0.09 0.15 8.10 -51.93 -0.42 -0.27 16 40 H 0.10 0.27 8.14 -51.93 -0.42 -0.15 16 41 H 0.38 -1.45 9.12 45.56 0.42 -1.04 16 42 H 0.10 -0.10 8.14 -51.93 -0.42 -0.52 16 43 H 0.08 -0.12 8.10 -51.93 -0.42 -0.54 16 44 H 0.14 0.27 7.64 -52.48 -0.40 -0.13 16 45 H 0.13 -0.12 6.19 -52.49 -0.32 -0.45 16 46 H 0.13 -0.13 6.19 -52.49 -0.33 -0.45 16 47 H 0.13 0.02 8.06 -52.49 -0.42 -0.41 16 LS Contribution 385.67 15.07 5.81 5.81 Total: 0.00 -10.78 385.67 -10.77 -21.54 By element: Atomic # 1 Polarization: -6.05 SS G_CDS: -4.21 Total: -10.26 kcal Atomic # 6 Polarization: 1.06 SS G_CDS: -5.72 Total: -4.66 kcal Atomic # 7 Polarization: -0.67 SS G_CDS: -0.24 Total: -0.91 kcal Atomic # 8 Polarization: -4.41 SS G_CDS: -1.33 Total: -5.74 kcal Atomic # 14 Polarization: -0.72 SS G_CDS: -5.07 Total: -5.79 kcal Total LS contribution 5.81 Total: 5.81 kcal Total: -10.78 -10.77 -21.54 kcal The number of atoms in the molecule is 47 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_18341542_13158362.mol2 47 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -51.225 kcal (2) G-P(sol) polarization free energy of solvation -10.779 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -62.004 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.765 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.545 kcal (6) G-S(sol) free energy of system = (1) + (5) -72.769 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.02 seconds