Wall clock time and date at job start Sun Mar 7 2021 09:00:22 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42900 * 1 3 3 Si 1.86309 * 109.47202 * 2 1 4 4 C 1.50697 * 109.47548 * 120.00091 * 2 1 3 5 5 C 1.34189 * 126.53959 * 254.97983 * 4 2 1 6 6 N 1.36874 * 109.96569 * 180.02562 * 5 4 2 7 7 C 1.37408 * 109.97836 * 0.22595 * 6 5 4 8 8 C 1.39326 * 133.24909 * 179.74559 * 7 6 5 9 9 C 1.36358 * 120.23409 * 180.02562 * 8 7 6 10 10 C 1.40168 * 120.66876 * 0.02562 * 9 8 7 11 11 C 1.47658 * 119.97185 * 180.02562 * 10 9 8 12 12 O 1.21573 * 119.99947 * 180.02562 * 11 10 9 13 13 N 1.34773 * 119.99616 * 359.97438 * 11 10 9 14 14 C 1.46505 * 119.99580 * 174.65065 * 13 11 10 15 15 C 1.52992 * 112.85118 * 75.58255 * 14 13 11 16 16 O 1.42899 * 109.47135 * 55.35099 * 15 14 13 17 17 C 1.53781 * 113.61364 * 206.89311 * 14 13 11 18 18 C 1.53774 * 87.08524 * 89.11439 * 17 14 13 19 19 H 1.08999 * 113.61863 * 139.98517 * 18 17 14 20 20 O 1.42901 * 113.61405 * 270.88382 * 18 17 14 21 21 C 1.53782 * 87.08304 * 25.43040 * 18 17 14 22 22 C 1.39192 * 120.05245 * 359.56040 * 10 9 8 23 23 C 1.39230 * 119.39041 * 0.67719 * 22 10 9 24 24 H 0.96698 * 114.00081 * 59.99398 * 1 2 3 25 25 H 1.08997 * 109.47112 * 240.00278 * 2 1 3 26 26 H 1.48500 * 109.99747 * 298.68412 * 3 2 1 27 27 H 1.48498 * 109.99715 * 60.00118 * 3 2 1 28 28 H 1.07994 * 125.02057 * 0.04781 * 5 4 2 29 29 H 0.96994 * 125.00645 * 179.97438 * 6 5 4 30 30 H 1.07998 * 119.87969 * 0.05053 * 8 7 6 31 31 H 1.08002 * 119.66084 * 179.97438 * 9 8 7 32 32 H 0.97000 * 120.00575 * 354.65010 * 13 11 10 33 33 H 1.09001 * 109.47354 * 175.35367 * 15 14 13 34 34 H 1.09010 * 109.47442 * 295.35244 * 15 14 13 35 35 H 0.96705 * 113.99663 * 179.97438 * 16 15 14 36 36 H 1.09001 * 113.61219 * 203.66449 * 17 14 13 37 37 H 1.09002 * 113.61158 * 334.56130 * 17 14 13 38 38 H 0.96697 * 114.00213 * 277.49903 * 20 18 17 39 39 H 1.08999 * 113.61634 * 220.01940 * 21 18 17 40 40 H 1.09002 * 113.61234 * 89.11610 * 21 18 17 41 41 H 1.08005 * 120.30139 * 179.97438 * 22 10 9 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0501 1.7565 0.0000 4 6 1.9314 -0.7104 1.2304 5 6 2.4612 -0.1387 2.3227 6 7 2.8037 -1.1006 3.2342 7 6 2.5008 -2.3459 2.7388 8 6 2.6460 -3.6359 3.2449 9 6 2.2459 -4.7115 2.5085 10 6 1.6851 -4.5377 1.2357 11 6 1.2567 -5.7133 0.4516 12 8 0.7706 -5.5633 -0.6526 13 7 1.4054 -6.9527 0.9598 14 6 0.8749 -8.1101 0.2349 15 6 1.7285 -8.4959 -0.9747 16 8 3.0765 -8.7172 -0.5553 17 6 0.5206 -9.2977 1.1454 18 6 -0.8786 -8.6745 1.2818 19 1 -1.6861 -9.4064 1.2656 20 8 -0.9894 -7.7479 2.3640 21 6 -0.6269 -8.0045 -0.0793 22 6 1.5229 -3.2574 0.7142 23 6 1.9352 -2.1578 1.4621 24 1 -0.3933 0.4418 -0.7650 25 1 1.7923 -0.5138 -0.8900 26 1 1.5879 2.4586 -1.2242 27 1 1.5615 2.4679 1.2085 28 1 2.5970 0.9236 2.4622 29 1 3.2048 -0.9286 4.1005 30 1 3.0765 -3.7843 4.2242 31 1 2.3632 -5.7073 2.9096 32 1 1.8638 -7.0785 1.8053 33 1 1.3330 -9.4076 -1.4226 34 1 1.7040 -7.6903 -1.7086 35 1 3.6756 -8.9665 -1.2723 36 1 0.5224 -10.2583 0.6304 37 1 1.0836 -9.3155 2.0786 38 1 -1.1478 -8.1633 3.2228 39 1 -0.9903 -6.9784 -0.1348 40 1 -0.9388 -8.6116 -0.9292 41 1 1.0916 -3.1189 -0.2662 There are 58 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 58 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_18341542_13287722.mol2 41 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 09:00:22 Heat of formation + Delta-G solvation = -61.016867 kcal Electronic energy + Delta-G solvation = -27118.936816 eV Core-core repulsion = 23160.393538 eV Total energy + Delta-G solvation = -3958.543278 eV No. of doubly occupied orbitals = 58 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 319.130 amu Computer time = 0.79 seconds Orbital eigenvalues (eV) -42.36878 -41.59461 -39.49601 -37.81692 -37.51255 -37.24270 -35.80697 -33.77870 -33.24907 -30.71974 -30.34273 -28.47900 -26.91225 -26.36804 -24.94207 -23.35615 -23.09501 -21.53724 -20.50509 -20.11781 -18.98462 -18.49778 -18.36740 -18.23588 -17.96408 -17.28583 -16.68877 -16.41130 -16.06096 -15.78660 -15.61016 -15.27602 -15.06579 -14.91672 -14.82552 -14.66666 -14.49413 -14.06114 -13.74503 -13.63933 -13.32336 -13.28295 -13.14125 -12.67062 -12.59777 -12.40564 -12.09659 -12.03442 -11.69867 -11.37150 -11.00470 -10.89545 -10.65201 -10.44553 -10.29182 -9.75599 -9.18150 -8.70552 -4.93489 0.08820 0.33439 1.33265 1.55832 1.61736 1.97457 2.08602 2.16559 2.28373 3.03760 3.10920 3.12782 3.52876 3.56394 3.64486 3.70522 3.77685 3.82584 4.01485 4.03589 4.18091 4.23656 4.34371 4.43397 4.50038 4.53140 4.61168 4.61748 4.69950 4.73286 4.82209 4.87909 4.90709 5.10134 5.14014 5.17179 5.39565 5.51981 5.62382 5.71348 5.79464 6.10718 6.47337 6.60405 6.69189 6.71337 6.78787 7.53070 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.535 6.535 2 C -0.042 4.042 3 Si 0.683 3.317 4 C -0.146 4.146 5 C 0.063 3.937 6 N -0.585 5.585 7 C 0.118 3.882 8 C -0.135 4.135 9 C -0.063 4.063 10 C -0.163 4.163 11 C 0.573 3.427 12 O -0.543 6.543 13 N -0.688 5.688 14 C 0.165 3.835 15 C 0.074 3.926 16 O -0.568 6.568 17 C -0.164 4.164 18 C 0.079 3.921 19 H 0.073 0.927 20 O -0.543 6.543 21 C -0.131 4.131 22 C 0.006 3.994 23 C -0.102 4.102 24 H 0.377 0.623 25 H 0.074 0.926 26 H -0.260 1.260 27 H -0.255 1.255 28 H 0.176 0.824 29 H 0.421 0.579 30 H 0.127 0.873 31 H 0.127 0.873 32 H 0.402 0.598 33 H 0.054 0.946 34 H 0.058 0.942 35 H 0.379 0.621 36 H 0.102 0.898 37 H 0.080 0.920 38 H 0.379 0.621 39 H 0.094 0.906 40 H 0.104 0.896 41 H 0.136 0.864 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.623 -1.532 2.493 4.658 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.342 6.342 2 C -0.152 4.152 3 Si 0.584 3.416 4 C -0.153 4.153 5 C -0.064 4.064 6 N -0.188 5.188 7 C 0.010 3.990 8 C -0.155 4.155 9 C -0.083 4.083 10 C -0.168 4.168 11 C 0.362 3.638 12 O -0.422 6.422 13 N -0.339 5.339 14 C 0.077 3.923 15 C -0.005 4.005 16 O -0.373 6.373 17 C -0.202 4.202 18 C 0.019 3.981 19 H 0.091 0.909 20 O -0.348 6.348 21 C -0.169 4.169 22 C -0.014 4.014 23 C -0.107 4.107 24 H 0.225 0.775 25 H 0.092 0.908 26 H -0.185 1.185 27 H -0.179 1.179 28 H 0.193 0.807 29 H 0.259 0.741 30 H 0.145 0.855 31 H 0.145 0.855 32 H 0.238 0.762 33 H 0.072 0.928 34 H 0.077 0.923 35 H 0.226 0.774 36 H 0.121 0.879 37 H 0.099 0.901 38 H 0.227 0.773 39 H 0.112 0.888 40 H 0.122 0.878 41 H 0.154 0.846 Dipole moment (debyes) X Y Z Total from point charges 3.031 -0.260 2.482 3.926 hybrid contribution -0.545 -0.729 0.231 0.939 sum 2.487 -0.988 2.713 3.811 Atomic orbital electron populations 1.86642 1.18127 1.79997 1.49461 1.24080 0.84032 1.09977 0.97150 0.95274 0.91437 0.74355 0.80572 1.19508 1.07936 0.91246 0.96580 1.21653 1.01323 0.94314 0.89079 1.41694 1.54950 1.04113 1.18014 1.18409 1.00022 0.86477 0.94120 1.19648 1.05954 0.88810 1.01102 1.20581 0.96423 0.98291 0.92973 1.19540 1.07743 0.93199 0.96285 1.18058 0.77652 0.82659 0.85444 1.90742 1.45247 1.86174 1.20011 1.45192 1.58887 1.04591 1.25228 1.21104 0.92607 0.86555 0.92006 1.22504 0.82559 0.99443 0.95999 1.86449 1.19551 1.92396 1.38945 1.23943 0.97885 0.97609 1.00795 1.22704 0.95557 0.91278 0.88532 0.90936 1.86545 1.94875 1.35140 1.18279 1.23351 0.93726 1.04035 0.95798 1.20633 0.92726 0.89213 0.98781 1.18902 1.04443 0.92851 0.94473 0.77547 0.90844 1.18457 1.17929 0.80730 0.74127 0.85514 0.85495 0.76225 0.92764 0.92338 0.77404 0.87919 0.90113 0.77338 0.88755 0.87756 0.84641 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 -1.57 12.86 -35.23 -0.45 -2.02 16 2 C -0.04 -0.06 3.05 36.00 0.11 0.05 16 3 Si 0.68 -0.54 30.80 -169.99 -5.23 -5.77 16 4 C -0.15 -0.37 5.61 -102.69 -0.58 -0.95 16 5 C 0.06 0.02 10.43 -16.73 -0.17 -0.16 16 6 N -0.59 0.18 6.05 -10.61 -0.06 0.12 16 7 C 0.12 0.26 7.27 -83.95 -0.61 -0.35 16 8 C -0.13 -0.13 10.00 -39.85 -0.40 -0.53 16 9 C -0.06 -0.10 9.46 -39.53 -0.37 -0.47 16 10 C -0.16 -0.67 5.87 -104.97 -0.62 -1.29 16 11 C 0.57 2.91 7.27 -12.42 -0.09 2.82 16 12 O -0.54 -4.29 14.25 5.30 0.08 -4.22 16 13 N -0.69 -1.69 4.44 -47.84 -0.21 -1.90 16 14 C 0.16 0.26 0.76 -131.01 -0.10 0.16 16 15 C 0.07 0.10 6.42 37.15 0.24 0.34 16 16 O -0.57 -0.82 13.54 -35.23 -0.48 -1.29 16 17 C -0.16 0.12 7.23 -25.92 -0.19 -0.07 16 18 C 0.08 -0.01 5.28 -25.92 -0.14 -0.14 16 19 H 0.07 -0.12 8.14 -51.93 -0.42 -0.54 16 20 O -0.54 -0.45 13.09 -35.23 -0.46 -0.91 16 21 C -0.13 -0.23 6.71 -25.92 -0.17 -0.40 16 22 C 0.01 0.03 9.64 -38.86 -0.37 -0.35 16 23 C -0.10 -0.41 6.34 -105.16 -0.67 -1.08 16 24 H 0.38 -0.44 8.74 45.56 0.40 -0.04 16 25 H 0.07 0.03 7.96 -51.93 -0.41 -0.38 16 26 H -0.26 -0.38 7.11 56.52 0.40 0.02 16 27 H -0.25 -0.38 7.04 56.52 0.40 0.02 16 28 H 0.18 -0.45 6.30 -52.49 -0.33 -0.78 16 29 H 0.42 -1.52 8.96 -40.82 -0.37 -1.88 16 30 H 0.13 -0.21 8.06 -52.49 -0.42 -0.63 16 31 H 0.13 -0.12 6.38 -52.49 -0.33 -0.45 16 32 H 0.40 0.31 6.77 -40.82 -0.28 0.03 16 33 H 0.05 -0.04 8.09 -51.93 -0.42 -0.46 16 34 H 0.06 0.19 7.52 -51.92 -0.39 -0.20 16 35 H 0.38 -0.89 9.12 45.56 0.42 -0.47 16 36 H 0.10 -0.20 8.06 -51.93 -0.42 -0.62 16 37 H 0.08 -0.08 8.13 -51.93 -0.42 -0.50 16 38 H 0.38 -1.27 9.12 45.56 0.42 -0.85 16 39 H 0.09 0.48 6.71 -51.93 -0.35 0.13 16 40 H 0.10 -0.02 8.10 -51.93 -0.42 -0.44 16 41 H 0.14 0.75 7.64 -52.48 -0.40 0.35 16 LS Contribution 344.32 15.07 5.19 5.19 Total: 0.00 -11.79 344.32 -9.13 -20.92 By element: Atomic # 1 Polarization: -4.33 SS G_CDS: -3.36 Total: -7.69 kcal Atomic # 6 Polarization: 1.72 SS G_CDS: -4.13 Total: -2.41 kcal Atomic # 7 Polarization: -1.51 SS G_CDS: -0.28 Total: -1.79 kcal Atomic # 8 Polarization: -7.13 SS G_CDS: -1.32 Total: -8.44 kcal Atomic # 14 Polarization: -0.54 SS G_CDS: -5.23 Total: -5.77 kcal Total LS contribution 5.19 Total: 5.19 kcal Total: -11.79 -9.13 -20.92 kcal The number of atoms in the molecule is 41 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_18341542_13287722.mol2 41 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -40.099 kcal (2) G-P(sol) polarization free energy of solvation -11.789 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -51.888 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.129 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.918 kcal (6) G-S(sol) free energy of system = (1) + (5) -61.017 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.79 seconds