Wall clock time and date at job start Sun Mar 7 2021 09:00:37 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50699 * 1 3 3 C 1.36418 * 125.80238 * 2 1 4 4 C 1.47377 * 127.19306 * 0.02562 * 3 2 1 5 5 O 1.21611 * 119.99704 * 359.69905 * 4 3 2 6 6 N 1.34773 * 119.99794 * 179.70818 * 4 3 2 7 7 C 1.46508 * 119.99857 * 184.98911 * 6 4 3 8 8 C 1.53002 * 112.90786 * 66.05984 * 7 6 4 9 9 O 1.42897 * 109.47104 * 47.37055 * 8 7 6 10 10 C 1.53773 * 113.61246 * 197.31553 * 7 6 4 11 11 C 1.53776 * 87.08440 * 89.11497 * 10 7 6 12 12 H 1.09004 * 113.61768 * 139.97693 * 11 10 7 13 13 O 1.42904 * 113.61417 * 270.88525 * 11 10 7 14 14 C 1.53782 * 113.61021 * 294.81309 * 7 6 4 15 15 C 1.47021 * 105.61269 * 179.75017 * 3 2 1 16 16 C 1.34179 * 105.95491 * 0.23068 * 15 3 2 17 17 C 1.50708 * 125.43558 * 179.97438 * 16 15 3 18 18 O 1.42904 * 109.46723 * 299.99563 * 17 16 15 19 19 Si 1.86297 * 109.47010 * 179.97438 * 17 16 15 20 20 O 1.33651 * 125.79967 * 180.14169 * 2 1 3 21 21 H 1.09001 * 109.47348 * 89.99363 * 1 2 3 22 22 H 1.08996 * 109.47533 * 209.99946 * 1 2 3 23 23 H 1.09002 * 109.46684 * 329.99820 * 1 2 3 24 24 H 0.97002 * 120.00322 * 4.98379 * 6 4 3 25 25 H 1.09003 * 109.46845 * 167.36849 * 8 7 6 26 26 H 1.09002 * 109.47004 * 287.37145 * 8 7 6 27 27 H 0.96696 * 114.00271 * 179.97438 * 9 8 7 28 28 H 1.09002 * 113.61185 * 203.66433 * 10 7 6 29 29 H 1.09005 * 113.61948 * 334.56169 * 10 7 6 30 30 H 0.96699 * 113.99403 * 277.49425 * 13 11 10 31 31 H 1.09003 * 113.61869 * 25.42864 * 14 7 6 32 32 H 1.09002 * 113.61438 * 156.34150 * 14 7 6 33 33 H 1.08000 * 127.02120 * 180.19958 * 15 3 2 34 34 H 1.08990 * 109.47220 * 59.99640 * 17 16 15 35 35 H 0.96701 * 113.99860 * 300.00119 * 18 17 16 36 36 H 1.48500 * 110.00074 * 179.97438 * 19 17 16 37 37 H 1.48500 * 109.99789 * 301.31687 * 19 17 16 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.3050 1.1064 0.0000 4 6 1.8740 2.5157 0.0005 5 8 0.6891 2.7892 -0.0045 6 7 2.7931 3.5014 0.0064 7 6 2.3677 4.8990 0.1173 8 6 1.7247 5.2204 1.4679 9 8 2.5392 4.6982 2.5195 10 6 3.4488 5.9074 -0.3060 11 6 2.8854 5.7934 -1.7323 12 1 2.8453 6.7445 -2.2632 13 8 3.4859 4.7508 -2.5033 14 6 1.5485 5.3909 -1.0876 15 6 3.6849 0.5990 0.0062 16 6 3.5858 -0.7391 0.0040 17 6 4.7459 -1.7012 0.0080 18 8 5.5477 -1.4853 -1.1550 19 14 4.1026 -3.4496 0.0037 20 8 2.2888 -1.0840 -0.0027 21 1 -0.3634 0.0001 -1.0277 22 1 -0.3634 -0.8899 0.5138 23 1 -0.3633 0.8900 0.5139 24 1 3.7363 3.2856 -0.0627 25 1 1.6355 6.3010 1.5798 26 1 0.7345 4.7672 1.5160 27 1 2.1918 4.8658 3.4062 28 1 3.3212 6.8955 0.1362 29 1 4.4650 5.5258 -0.2060 30 1 4.3270 4.9980 -2.9113 31 1 1.0305 4.5923 -1.6188 32 1 0.9015 6.2379 -0.8593 33 1 4.5928 1.1839 0.0109 34 1 5.3495 -1.5387 0.9008 35 1 5.0741 -1.6127 -1.9884 36 1 5.2368 -4.4081 0.0070 37 1 3.2415 -3.6768 1.1921 There are 52 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 52 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_18341542_13308374.mol2 37 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 09:00:37 Heat of formation + Delta-G solvation = -118.169245 kcal Electronic energy + Delta-G solvation = -23482.652883 eV Core-core repulsion = 19808.591052 eV Total energy + Delta-G solvation = -3674.061831 eV No. of doubly occupied orbitals = 52 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 284.118 amu Computer time = 0.57 seconds Orbital eigenvalues (eV) -43.77645 -41.65444 -39.41715 -38.01448 -37.56756 -35.91752 -34.46486 -33.59741 -32.97772 -29.46517 -28.61494 -26.94743 -25.98536 -24.56062 -23.23265 -22.21747 -20.72918 -20.26170 -18.96875 -18.35041 -18.17068 -17.85904 -17.67315 -17.07554 -16.69652 -16.39843 -16.05897 -15.83701 -15.59297 -15.31469 -14.88224 -14.73686 -14.28950 -14.25348 -14.00563 -13.83577 -13.64393 -13.42069 -13.17274 -12.88031 -12.78741 -12.66868 -12.25175 -12.17759 -11.46705 -11.18448 -10.96843 -10.93031 -10.71751 -10.60137 -9.96955 -9.57140 -5.01257 0.23820 0.82628 1.16644 1.39143 1.75368 1.89537 2.12323 2.29560 3.04278 3.14227 3.21242 3.46034 3.50511 3.61449 3.69792 3.77095 3.83362 4.10747 4.18696 4.29577 4.40127 4.40965 4.47441 4.58216 4.60526 4.64716 4.66506 4.78093 4.81469 4.87747 5.01022 5.05806 5.12729 5.19473 5.60884 5.88063 6.53245 6.60449 6.76477 6.88901 7.21831 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.082 4.082 2 C 0.081 3.919 3 C -0.267 4.267 4 C 0.593 3.407 5 O -0.572 6.572 6 N -0.674 5.674 7 C 0.148 3.852 8 C 0.076 3.924 9 O -0.584 6.584 10 C -0.153 4.153 11 C 0.083 3.917 12 H 0.095 0.905 13 O -0.567 6.567 14 C -0.137 4.137 15 C -0.150 4.150 16 C -0.059 4.059 17 C -0.026 4.026 18 O -0.539 6.539 19 Si 0.780 3.220 20 O -0.171 6.171 21 H 0.101 0.899 22 H 0.098 0.902 23 H 0.094 0.906 24 H 0.407 0.593 25 H 0.080 0.920 26 H 0.036 0.964 27 H 0.393 0.607 28 H 0.123 0.877 29 H 0.083 0.917 30 H 0.397 0.603 31 H 0.057 0.943 32 H 0.121 0.879 33 H 0.168 0.832 34 H 0.137 0.863 35 H 0.400 0.600 36 H -0.276 1.276 37 H -0.295 1.295 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.405 2.774 -1.668 3.528 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.137 4.137 2 C 0.028 3.972 3 C -0.272 4.272 4 C 0.382 3.618 5 O -0.454 6.454 6 N -0.323 5.323 7 C 0.061 3.939 8 C -0.003 4.003 9 O -0.391 6.391 10 C -0.191 4.191 11 C 0.024 3.976 12 H 0.112 0.888 13 O -0.375 6.375 14 C -0.175 4.175 15 C -0.169 4.169 16 C -0.107 4.107 17 C -0.136 4.136 18 O -0.347 6.347 19 Si 0.684 3.316 20 O -0.068 6.068 21 H 0.119 0.881 22 H 0.116 0.884 23 H 0.113 0.887 24 H 0.242 0.758 25 H 0.098 0.902 26 H 0.055 0.945 27 H 0.242 0.758 28 H 0.141 0.859 29 H 0.102 0.898 30 H 0.247 0.753 31 H 0.075 0.925 32 H 0.139 0.861 33 H 0.186 0.814 34 H 0.154 0.846 35 H 0.250 0.750 36 H -0.202 1.202 37 H -0.222 1.222 Dipole moment (debyes) X Y Z Total from point charges 0.778 1.536 -1.121 2.054 hybrid contribution 0.692 1.027 0.766 1.456 sum 1.469 2.563 -0.355 2.976 Atomic orbital electron populations 1.20680 0.82422 1.05339 1.05298 1.23216 0.94817 0.82897 0.96284 1.21292 0.94220 0.93798 1.17843 1.17263 0.85263 0.84208 0.75069 1.90702 1.17593 1.84464 1.52606 1.45044 1.09682 1.04435 1.73172 1.21433 0.97612 0.81750 0.93110 1.22511 0.93042 0.98320 0.86439 1.86427 1.52104 1.82128 1.18471 1.23975 0.98493 0.99670 0.96913 1.22723 0.93198 0.90928 0.90730 0.88751 1.86492 1.41929 1.40265 1.68823 1.23451 0.96741 1.02094 0.95206 1.22725 0.96361 0.93795 1.04048 1.22920 0.82986 0.95863 1.08949 1.24509 0.89188 1.07235 0.92645 1.86526 1.38625 1.93392 1.16186 0.93221 0.78966 0.72143 0.87276 1.83656 1.16671 1.34900 1.71576 0.88070 0.88376 0.88712 0.75755 0.90156 0.94518 0.75805 0.85863 0.89848 0.75319 0.92451 0.86052 0.81403 0.84615 0.74965 1.20226 1.22172 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.08 -0.22 9.89 71.24 0.70 0.48 16 2 C 0.08 0.55 7.37 25.26 0.19 0.73 16 3 C -0.27 -2.24 6.31 -18.99 -0.12 -2.36 16 4 C 0.59 6.23 7.37 86.65 0.64 6.87 16 5 O -0.57 -8.46 12.87 -4.07 -0.05 -8.51 16 6 N -0.67 -3.81 4.38 -423.80 -1.86 -5.67 16 7 C 0.15 0.39 0.80 4.13 0.00 0.39 16 8 C 0.08 0.18 6.29 71.98 0.45 0.63 16 9 O -0.58 -2.09 13.39 -148.98 -2.00 -4.09 16 10 C -0.15 0.51 7.19 31.12 0.22 0.73 16 11 C 0.08 -0.17 5.28 31.12 0.16 -0.01 16 12 H 0.09 -0.58 8.14 -2.39 -0.02 -0.60 16 13 O -0.57 -0.20 13.09 -148.98 -1.95 -2.15 16 14 C -0.14 -0.33 6.78 31.12 0.21 -0.12 16 15 C -0.15 -0.68 10.46 23.65 0.25 -0.44 16 16 C -0.06 -0.19 6.20 24.76 0.15 -0.03 16 17 C -0.03 0.02 2.97 71.24 0.21 0.23 16 18 O -0.54 0.74 12.86 -148.98 -1.92 -1.18 16 19 Si 0.78 -0.93 32.09 68.60 2.20 1.27 16 20 O -0.17 -0.85 8.89 4.51 0.04 -0.81 16 21 H 0.10 0.06 8.14 -2.39 -0.02 0.04 16 22 H 0.10 -0.13 8.14 -2.39 -0.02 -0.15 16 23 H 0.09 0.59 6.49 -2.39 -0.02 0.57 16 24 H 0.41 1.31 7.85 -92.71 -0.73 0.58 16 25 H 0.08 -0.25 7.91 -2.39 -0.02 -0.27 16 26 H 0.04 0.25 7.39 -2.39 -0.02 0.23 16 27 H 0.39 -1.56 9.12 -74.06 -0.68 -2.23 16 28 H 0.12 -0.87 7.94 -2.39 -0.02 -0.89 16 29 H 0.08 -0.28 8.09 -2.38 -0.02 -0.30 16 30 H 0.40 -3.25 9.12 -74.06 -0.68 -3.93 16 31 H 0.06 0.56 7.19 -2.39 -0.02 0.55 16 32 H 0.12 -0.24 8.10 -2.39 -0.02 -0.26 16 33 H 0.17 0.19 7.75 -2.91 -0.02 0.17 16 34 H 0.14 -0.21 7.96 -2.39 -0.02 -0.23 16 35 H 0.40 -3.50 8.70 -74.06 -0.64 -4.15 16 36 H -0.28 -1.01 7.11 99.48 0.71 -0.30 16 37 H -0.29 -1.72 7.11 99.48 0.71 -1.01 16 Total: 0.00 -22.22 316.75 -3.99 -26.21 By element: Atomic # 1 Polarization: -10.66 SS G_CDS: -1.54 Total: -12.20 kcal Atomic # 6 Polarization: 4.04 SS G_CDS: 3.08 Total: 7.12 kcal Atomic # 7 Polarization: -3.81 SS G_CDS: -1.86 Total: -5.67 kcal Atomic # 8 Polarization: -10.86 SS G_CDS: -5.87 Total: -16.73 kcal Atomic # 14 Polarization: -0.93 SS G_CDS: 2.20 Total: 1.27 kcal Total: -22.22 -3.99 -26.21 kcal The number of atoms in the molecule is 37 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_18341542_13308374.mol2 37 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -91.958 kcal (2) G-P(sol) polarization free energy of solvation -22.224 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -114.183 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -3.987 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -26.211 kcal (6) G-S(sol) free energy of system = (1) + (5) -118.169 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.57 seconds