Wall clock time and date at job start Sun Mar 7 2021 09:00:58 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50703 * 1 3 3 C 1.37865 * 126.45383 * 2 1 4 4 C 1.46679 * 126.23733 * 359.96415 * 3 2 1 5 5 O 1.21697 * 119.99810 * 359.72711 * 4 3 2 6 6 N 1.34777 * 119.99778 * 179.97438 * 4 3 2 7 7 C 1.46505 * 119.99692 * 174.35646 * 6 4 3 8 8 C 1.53008 * 112.84495 * 75.48838 * 7 6 4 9 9 O 1.42897 * 109.46789 * 55.35651 * 8 7 6 10 10 C 1.53781 * 113.61532 * 206.79198 * 7 6 4 11 11 C 1.53782 * 87.07684 * 89.11828 * 10 7 6 12 12 H 1.09003 * 113.61002 * 139.97701 * 11 10 7 13 13 O 1.42898 * 113.69321 * 270.86822 * 11 10 7 14 14 C 1.53771 * 113.61563 * 304.29456 * 7 6 4 15 15 N 1.37651 * 107.53097 * 180.22683 * 3 2 1 16 16 C 1.35535 * 108.64310 * 359.56742 * 15 3 2 17 17 C 1.50700 * 125.56591 * 180.17081 * 16 15 3 18 18 O 1.42895 * 109.47667 * 65.28581 * 17 16 15 19 19 Si 1.86298 * 109.47392 * 185.28941 * 17 16 15 20 20 C 1.35454 * 108.87292 * 0.43717 * 16 15 3 21 21 H 1.08994 * 109.47371 * 89.99784 * 1 2 3 22 22 H 1.09005 * 109.47191 * 210.00340 * 1 2 3 23 23 H 1.09006 * 109.47311 * 330.00203 * 1 2 3 24 24 H 0.96998 * 120.00104 * 354.36173 * 6 4 3 25 25 H 1.08998 * 109.46805 * 175.35159 * 8 7 6 26 26 H 1.08996 * 109.47208 * 295.35813 * 8 7 6 27 27 H 0.96706 * 113.99944 * 179.97438 * 9 8 7 28 28 H 1.08997 * 113.61379 * 203.66613 * 10 7 6 29 29 H 1.09000 * 113.61179 * 334.57483 * 10 7 6 30 30 H 0.96696 * 114.00074 * 277.54065 * 13 11 10 31 31 H 1.09003 * 113.61977 * 25.42895 * 14 7 6 32 32 H 1.09008 * 113.61349 * 156.33614 * 14 7 6 33 33 H 0.97006 * 125.68238 * 179.71757 * 15 3 2 34 34 H 1.09008 * 109.47135 * 305.28683 * 17 16 15 35 35 H 0.96702 * 113.99983 * 59.99935 * 18 17 16 36 36 H 1.48498 * 110.00475 * 179.97438 * 19 17 16 37 37 H 1.48504 * 109.99868 * 301.31755 * 19 17 16 38 38 H 1.07998 * 126.06954 * 179.75201 * 20 16 15 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.3262 1.1089 0.0000 4 6 1.8898 2.5093 -0.0007 5 8 0.7026 2.7766 -0.0065 6 7 2.8037 3.4999 -0.0001 7 6 2.3724 4.8944 -0.1256 8 6 1.7609 5.4454 1.1642 9 8 2.6885 5.2817 2.2388 10 6 3.4361 5.8145 -0.7475 11 6 2.8373 5.4504 -2.1164 12 1 2.7777 6.2933 -2.8050 13 8 3.4237 4.2900 -2.7093 14 6 1.5198 5.1653 -1.3763 15 7 3.6283 0.6625 -0.0052 16 6 3.6217 -0.6928 0.0013 17 6 4.8433 -1.5753 0.0023 18 8 5.5626 -1.3918 1.2234 19 14 4.3222 -3.3574 -0.1496 20 6 2.3379 -1.1247 0.0009 21 1 -0.3634 0.0000 -1.0276 22 1 -0.3634 -0.8900 0.5139 23 1 -0.3634 0.8900 0.5138 24 1 3.7469 3.2895 0.0833 25 1 1.5363 6.5043 1.0362 26 1 0.8426 4.9040 1.3912 27 1 2.3667 5.6103 3.0895 28 1 3.3135 6.8647 -0.4828 29 1 4.4567 5.4582 -0.6087 30 1 4.2526 4.4630 -3.1762 31 1 0.9935 4.2849 -1.7452 32 1 0.8734 6.0381 -1.2835 33 1 4.4191 1.2244 -0.0103 34 1 5.4833 -1.3108 -0.8396 35 1 5.0533 -1.6087 2.0163 36 1 5.5179 -4.2380 -0.1505 37 1 3.4235 -3.7215 0.9752 38 1 2.0136 -2.1549 0.0014 There are 52 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 52 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_18341542_13940406.mol2 38 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 09:00:58 Heat of formation + Delta-G solvation = -86.438609 kcal Electronic energy + Delta-G solvation = -23427.708036 eV Core-core repulsion = 19852.740810 eV Total energy + Delta-G solvation = -3574.967226 eV No. of doubly occupied orbitals = 52 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 283.130 amu Computer time = 0.52 seconds Orbital eigenvalues (eV) -42.53299 -41.50406 -39.15241 -37.83342 -37.56780 -35.95345 -34.18960 -33.18993 -31.45849 -28.75076 -28.06365 -27.03907 -26.72502 -23.74190 -22.48160 -21.54568 -20.39189 -20.27482 -19.42157 -18.36821 -18.30678 -18.02685 -16.98029 -16.70916 -16.47271 -16.33075 -15.79710 -15.49610 -15.32804 -15.10288 -14.89570 -14.41343 -14.23535 -13.90196 -13.66886 -13.49183 -13.42485 -13.37085 -13.24814 -12.85548 -12.68820 -12.22419 -12.16151 -11.81332 -11.49976 -11.12710 -11.03925 -10.90289 -10.54758 -9.94954 -9.72229 -9.04803 -4.93807 0.50035 1.16575 1.63310 1.64585 1.87894 2.07429 2.25275 2.51644 2.91979 3.00507 3.25901 3.40756 3.53213 3.60034 3.66062 3.95079 4.08612 4.24623 4.27156 4.33600 4.40783 4.47500 4.51593 4.60308 4.70673 4.76013 4.82970 4.93735 4.97840 5.05080 5.10541 5.30348 5.47749 5.60815 5.76439 6.00958 6.27310 6.36458 6.56803 6.59884 6.62239 7.31116 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.091 4.091 2 C -0.069 4.069 3 C -0.048 4.048 4 C 0.598 3.402 5 O -0.526 6.526 6 N -0.692 5.692 7 C 0.165 3.835 8 C 0.074 3.926 9 O -0.570 6.570 10 C -0.164 4.164 11 C 0.079 3.921 12 H 0.074 0.926 13 O -0.545 6.545 14 C -0.129 4.129 15 N -0.522 5.522 16 C 0.025 3.975 17 C -0.061 4.061 18 O -0.534 6.534 19 Si 0.717 3.283 20 C -0.200 4.200 21 H 0.069 0.931 22 H 0.063 0.937 23 H 0.080 0.920 24 H 0.396 0.604 25 H 0.056 0.944 26 H 0.059 0.941 27 H 0.380 0.620 28 H 0.104 0.896 29 H 0.079 0.921 30 H 0.380 0.620 31 H 0.095 0.905 32 H 0.106 0.894 33 H 0.416 0.584 34 H 0.118 0.882 35 H 0.380 0.620 36 H -0.256 1.256 37 H -0.255 1.255 38 H 0.149 0.851 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.559 2.119 -1.763 3.167 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.148 4.148 2 C -0.077 4.077 3 C -0.161 4.161 4 C 0.387 3.613 5 O -0.402 6.402 6 N -0.343 5.343 7 C 0.077 3.923 8 C -0.005 4.005 9 O -0.375 6.375 10 C -0.202 4.202 11 C 0.019 3.981 12 H 0.092 0.908 13 O -0.350 6.350 14 C -0.167 4.167 15 N -0.118 5.118 16 C -0.093 4.093 17 C -0.170 4.170 18 O -0.341 6.341 19 Si 0.616 3.384 20 C -0.225 4.225 21 H 0.088 0.912 22 H 0.082 0.918 23 H 0.099 0.901 24 H 0.230 0.770 25 H 0.074 0.926 26 H 0.078 0.922 27 H 0.227 0.773 28 H 0.123 0.877 29 H 0.098 0.902 30 H 0.227 0.773 31 H 0.113 0.887 32 H 0.124 0.876 33 H 0.253 0.747 34 H 0.136 0.864 35 H 0.228 0.772 36 H -0.181 1.181 37 H -0.179 1.179 38 H 0.166 0.834 Dipole moment (debyes) X Y Z Total from point charges 1.122 1.307 -2.041 2.671 hybrid contribution 1.252 1.302 1.398 2.285 sum 2.374 2.610 -0.643 3.586 Atomic orbital electron populations 1.20369 0.88940 1.03021 1.02506 1.19903 0.95984 0.90333 1.01478 1.20244 0.83495 0.93529 1.18827 1.16926 0.85751 0.82784 0.75879 1.90797 1.15926 1.83144 1.50372 1.45194 1.09480 1.04702 1.74881 1.21136 0.96498 0.81649 0.92968 1.22508 0.92350 0.98957 0.86704 1.86441 1.44709 1.86287 1.20072 1.23954 0.99202 1.00300 0.96791 1.22715 0.94539 0.88171 0.92643 0.90780 1.86523 1.42410 1.32832 1.73254 1.23351 0.95908 1.04207 0.93282 1.41861 1.07209 1.06508 1.56194 1.20999 0.96741 0.83319 1.08291 1.24886 0.92757 1.09494 0.89877 1.86592 1.42505 1.89459 1.15518 0.94217 0.81563 0.72263 0.90330 1.20599 0.90875 0.99081 1.11954 0.91204 0.91832 0.90148 0.76993 0.92590 0.92244 0.77270 0.87749 0.90226 0.77275 0.88661 0.87568 0.74662 0.86373 0.77177 1.18062 1.17921 0.83355 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.09 -0.24 9.83 36.01 0.35 0.11 16 2 C -0.07 -0.22 6.21 -104.16 -0.65 -0.87 16 3 C -0.05 -0.15 7.05 -81.98 -0.58 -0.73 16 4 C 0.60 2.34 7.29 -12.85 -0.09 2.24 16 5 O -0.53 -3.28 12.72 5.19 0.07 -3.21 16 6 N -0.69 -1.03 4.50 -48.14 -0.22 -1.25 16 7 C 0.16 0.12 0.76 -131.01 -0.10 0.02 16 8 C 0.07 0.05 6.42 37.16 0.24 0.29 16 9 O -0.57 -0.59 13.54 -35.23 -0.48 -1.07 16 10 C -0.16 0.23 7.23 -25.92 -0.19 0.04 16 11 C 0.08 -0.07 5.27 -25.92 -0.14 -0.21 16 12 H 0.07 -0.18 8.14 -51.93 -0.42 -0.60 16 13 O -0.55 0.07 13.09 -35.23 -0.46 -0.39 16 14 C -0.13 -0.09 6.71 -25.93 -0.17 -0.26 16 15 N -0.52 -0.42 5.99 -5.70 -0.03 -0.46 16 16 C 0.02 0.02 6.47 -81.95 -0.53 -0.51 16 17 C -0.06 0.04 3.08 36.01 0.11 0.15 16 18 O -0.53 -0.30 12.88 -35.23 -0.45 -0.75 16 19 Si 0.72 -0.99 30.56 -169.99 -5.19 -6.18 16 20 C -0.20 -0.29 9.27 -39.98 -0.37 -0.66 16 21 H 0.07 0.16 8.14 -51.93 -0.42 -0.26 16 22 H 0.06 0.07 8.14 -51.93 -0.42 -0.35 16 23 H 0.08 0.34 6.49 -51.93 -0.34 0.00 16 24 H 0.40 0.01 7.90 -40.82 -0.32 -0.31 16 25 H 0.06 -0.07 8.09 -51.93 -0.42 -0.49 16 26 H 0.06 0.14 7.51 -51.93 -0.39 -0.25 16 27 H 0.38 -1.01 9.12 45.56 0.42 -0.59 16 28 H 0.10 -0.26 8.06 -51.93 -0.42 -0.68 16 29 H 0.08 -0.12 8.13 -51.93 -0.42 -0.54 16 30 H 0.38 -1.56 9.12 45.56 0.42 -1.15 16 31 H 0.09 0.35 6.72 -51.93 -0.35 0.00 16 32 H 0.11 -0.13 8.10 -51.92 -0.42 -0.55 16 33 H 0.42 -0.48 8.21 -40.82 -0.33 -0.82 16 34 H 0.12 -0.20 7.96 -51.92 -0.41 -0.62 16 35 H 0.38 -0.69 8.70 45.56 0.40 -0.29 16 36 H -0.26 -0.41 7.11 56.52 0.40 0.00 16 37 H -0.26 -0.18 7.11 56.52 0.40 0.22 16 38 H 0.15 -0.06 6.19 -52.49 -0.32 -0.39 16 LS Contribution 317.80 15.07 4.79 4.79 Total: 0.00 -9.09 317.80 -7.49 -16.57 By element: Atomic # 1 Polarization: -4.27 SS G_CDS: -3.39 Total: -7.66 kcal Atomic # 6 Polarization: 1.73 SS G_CDS: -2.11 Total: -0.38 kcal Atomic # 7 Polarization: -1.45 SS G_CDS: -0.25 Total: -1.71 kcal Atomic # 8 Polarization: -4.10 SS G_CDS: -1.33 Total: -5.43 kcal Atomic # 14 Polarization: -0.99 SS G_CDS: -5.19 Total: -6.18 kcal Total LS contribution 4.79 Total: 4.79 kcal Total: -9.09 -7.49 -16.57 kcal The number of atoms in the molecule is 38 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_18341542_13940406.mol2 38 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -69.865 kcal (2) G-P(sol) polarization free energy of solvation -9.087 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -78.952 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.486 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -16.573 kcal (6) G-S(sol) free energy of system = (1) + (5) -86.439 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.52 seconds