Wall clock time and date at job start Sun Mar 7 2021 09:00:58 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50703 * 1 3 3 C 1.37865 * 126.45383 * 2 1 4 4 C 1.46679 * 126.23733 * 359.96415 * 3 2 1 5 5 O 1.21697 * 119.99810 * 359.72711 * 4 3 2 6 6 N 1.34777 * 119.99778 * 179.97438 * 4 3 2 7 7 C 1.46505 * 119.99692 * 174.35646 * 6 4 3 8 8 C 1.53008 * 112.84495 * 75.48838 * 7 6 4 9 9 O 1.42897 * 109.46789 * 55.35651 * 8 7 6 10 10 C 1.53781 * 113.61532 * 206.79198 * 7 6 4 11 11 C 1.53782 * 87.07684 * 89.11828 * 10 7 6 12 12 H 1.09003 * 113.61002 * 139.97701 * 11 10 7 13 13 O 1.42898 * 113.69321 * 270.86822 * 11 10 7 14 14 C 1.53771 * 113.61563 * 304.29456 * 7 6 4 15 15 N 1.37651 * 107.53097 * 180.22683 * 3 2 1 16 16 C 1.35535 * 108.64310 * 359.56742 * 15 3 2 17 17 C 1.50700 * 125.56591 * 180.17081 * 16 15 3 18 18 O 1.42895 * 109.47667 * 65.28581 * 17 16 15 19 19 Si 1.86298 * 109.47392 * 185.28941 * 17 16 15 20 20 C 1.35454 * 108.87292 * 0.43717 * 16 15 3 21 21 H 1.08994 * 109.47371 * 89.99784 * 1 2 3 22 22 H 1.09005 * 109.47191 * 210.00340 * 1 2 3 23 23 H 1.09006 * 109.47311 * 330.00203 * 1 2 3 24 24 H 0.96998 * 120.00104 * 354.36173 * 6 4 3 25 25 H 1.08998 * 109.46805 * 175.35159 * 8 7 6 26 26 H 1.08996 * 109.47208 * 295.35813 * 8 7 6 27 27 H 0.96706 * 113.99944 * 179.97438 * 9 8 7 28 28 H 1.08997 * 113.61379 * 203.66613 * 10 7 6 29 29 H 1.09000 * 113.61179 * 334.57483 * 10 7 6 30 30 H 0.96696 * 114.00074 * 277.54065 * 13 11 10 31 31 H 1.09003 * 113.61977 * 25.42895 * 14 7 6 32 32 H 1.09008 * 113.61349 * 156.33614 * 14 7 6 33 33 H 0.97006 * 125.68238 * 179.71757 * 15 3 2 34 34 H 1.09008 * 109.47135 * 305.28683 * 17 16 15 35 35 H 0.96702 * 113.99983 * 59.99935 * 18 17 16 36 36 H 1.48498 * 110.00475 * 179.97438 * 19 17 16 37 37 H 1.48504 * 109.99868 * 301.31755 * 19 17 16 38 38 H 1.07998 * 126.06954 * 179.75201 * 20 16 15 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.3262 1.1089 0.0000 4 6 1.8898 2.5093 -0.0007 5 8 0.7026 2.7766 -0.0065 6 7 2.8037 3.4999 -0.0001 7 6 2.3724 4.8944 -0.1256 8 6 1.7609 5.4454 1.1642 9 8 2.6885 5.2817 2.2388 10 6 3.4361 5.8145 -0.7475 11 6 2.8373 5.4504 -2.1164 12 1 2.7777 6.2933 -2.8050 13 8 3.4237 4.2900 -2.7093 14 6 1.5198 5.1653 -1.3763 15 7 3.6283 0.6625 -0.0052 16 6 3.6217 -0.6928 0.0013 17 6 4.8433 -1.5753 0.0023 18 8 5.5626 -1.3918 1.2234 19 14 4.3222 -3.3574 -0.1496 20 6 2.3379 -1.1247 0.0009 21 1 -0.3634 0.0000 -1.0276 22 1 -0.3634 -0.8900 0.5139 23 1 -0.3634 0.8900 0.5138 24 1 3.7469 3.2895 0.0833 25 1 1.5363 6.5043 1.0362 26 1 0.8426 4.9040 1.3912 27 1 2.3667 5.6103 3.0895 28 1 3.3135 6.8647 -0.4828 29 1 4.4567 5.4582 -0.6087 30 1 4.2526 4.4630 -3.1762 31 1 0.9935 4.2849 -1.7452 32 1 0.8734 6.0381 -1.2835 33 1 4.4191 1.2244 -0.0103 34 1 5.4833 -1.3108 -0.8396 35 1 5.0533 -1.6087 2.0163 36 1 5.5179 -4.2380 -0.1505 37 1 3.4235 -3.7215 0.9752 38 1 2.0136 -2.1549 0.0014 There are 52 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 52 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_18341542_13940406.mol2 38 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 09:00:58 Heat of formation + Delta-G solvation = -94.426231 kcal Electronic energy + Delta-G solvation = -23428.054405 eV Core-core repulsion = 19852.740810 eV Total energy + Delta-G solvation = -3575.313595 eV No. of doubly occupied orbitals = 52 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 283.130 amu Computer time = 0.63 seconds Orbital eigenvalues (eV) -42.65106 -41.53621 -39.31000 -37.85207 -37.58838 -35.97640 -34.30786 -33.34821 -31.53959 -28.77652 -28.20101 -27.01009 -26.79889 -23.78832 -22.52637 -21.62403 -20.52752 -20.33817 -19.54194 -18.34975 -18.31632 -18.05065 -17.05332 -16.75846 -16.46946 -16.42144 -15.89494 -15.56444 -15.39620 -15.12296 -14.97840 -14.52393 -14.33822 -13.95742 -13.71472 -13.61463 -13.56393 -13.42103 -13.16893 -13.01069 -12.73993 -12.26523 -12.16673 -11.86044 -11.52479 -11.20851 -11.00389 -10.90234 -10.68735 -10.07075 -9.83688 -9.19718 -4.84191 0.32761 1.21946 1.52777 1.68817 1.89025 1.99049 2.21453 2.29339 2.98219 3.10533 3.33717 3.48278 3.56121 3.59384 3.68799 3.87133 4.11478 4.15845 4.22642 4.38328 4.39052 4.47788 4.58934 4.63777 4.70190 4.78613 4.79356 4.82783 4.89187 4.97860 5.03386 5.14033 5.32204 5.51163 5.64053 5.85112 6.30397 6.38392 6.49074 6.73994 6.84943 7.11646 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.087 4.087 2 C -0.090 4.090 3 C -0.067 4.067 4 C 0.591 3.409 5 O -0.559 6.559 6 N -0.683 5.683 7 C 0.149 3.851 8 C 0.076 3.924 9 O -0.584 6.584 10 C -0.149 4.149 11 C 0.083 3.917 12 H 0.094 0.906 13 O -0.566 6.566 14 C -0.137 4.137 15 N -0.513 5.513 16 C 0.034 3.966 17 C -0.065 4.065 18 O -0.549 6.549 19 Si 0.795 3.205 20 C -0.208 4.208 21 H 0.069 0.931 22 H 0.078 0.922 23 H 0.059 0.941 24 H 0.402 0.598 25 H 0.080 0.920 26 H 0.034 0.966 27 H 0.394 0.606 28 H 0.122 0.878 29 H 0.083 0.917 30 H 0.396 0.604 31 H 0.059 0.941 32 H 0.122 0.878 33 H 0.425 0.575 34 H 0.133 0.867 35 H 0.389 0.611 36 H -0.295 1.295 37 H -0.281 1.281 38 H 0.166 0.834 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.782 2.584 -2.094 4.336 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.144 4.144 2 C -0.098 4.098 3 C -0.181 4.181 4 C 0.380 3.620 5 O -0.438 6.438 6 N -0.332 5.332 7 C 0.062 3.938 8 C -0.003 4.003 9 O -0.392 6.392 10 C -0.187 4.187 11 C 0.024 3.976 12 H 0.112 0.888 13 O -0.374 6.374 14 C -0.175 4.175 15 N -0.110 5.110 16 C -0.085 4.085 17 C -0.173 4.173 18 O -0.357 6.357 19 Si 0.698 3.302 20 C -0.232 4.232 21 H 0.087 0.913 22 H 0.097 0.903 23 H 0.078 0.922 24 H 0.238 0.762 25 H 0.098 0.902 26 H 0.052 0.948 27 H 0.244 0.756 28 H 0.140 0.860 29 H 0.102 0.898 30 H 0.246 0.754 31 H 0.078 0.922 32 H 0.140 0.860 33 H 0.264 0.736 34 H 0.151 0.849 35 H 0.239 0.761 36 H -0.223 1.223 37 H -0.207 1.207 38 H 0.183 0.817 Dipole moment (debyes) X Y Z Total from point charges 2.380 1.814 -2.371 3.819 hybrid contribution 0.901 1.130 1.538 2.110 sum 3.281 2.944 -0.833 4.486 Atomic orbital electron populations 1.20310 0.89108 1.02673 1.02358 1.20163 0.96353 0.91233 1.02096 1.20239 0.84498 0.93310 1.20009 1.17135 0.85644 0.83529 0.75672 1.90770 1.17244 1.83698 1.52100 1.45146 1.09439 1.04885 1.73769 1.21410 0.97760 0.81527 0.93107 1.22496 0.91228 0.99908 0.86671 1.86396 1.45051 1.86674 1.21036 1.23917 0.98534 1.00585 0.95700 1.22727 0.93257 0.88332 0.93259 0.88818 1.86485 1.43617 1.33689 1.73651 1.23428 0.96788 1.03359 0.93902 1.41837 1.06804 1.06782 1.55556 1.21240 0.97066 0.83253 1.06950 1.25112 0.92445 1.09674 0.90055 1.86572 1.43178 1.89636 1.16265 0.93254 0.78486 0.69831 0.88609 1.20820 0.90886 0.99475 1.12009 0.91278 0.90339 0.92220 0.76241 0.90246 0.94804 0.75632 0.86017 0.89827 0.75375 0.92233 0.85969 0.73622 0.84920 0.76129 1.22251 1.20730 0.81679 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.09 -0.62 9.83 71.24 0.70 0.08 16 2 C -0.09 -0.69 6.21 -19.57 -0.12 -0.81 16 3 C -0.07 -0.51 7.05 40.35 0.28 -0.23 16 4 C 0.59 5.81 7.29 86.45 0.63 6.44 16 5 O -0.56 -8.66 12.72 -4.34 -0.06 -8.71 16 6 N -0.68 -2.76 4.50 -424.44 -1.91 -4.67 16 7 C 0.15 0.29 0.76 4.13 0.00 0.29 16 8 C 0.08 0.15 6.42 71.98 0.46 0.61 16 9 O -0.58 -1.28 13.54 -148.98 -2.02 -3.29 16 10 C -0.15 0.58 7.23 31.12 0.23 0.80 16 11 C 0.08 -0.20 5.27 31.12 0.16 -0.04 16 12 H 0.09 -0.59 8.14 -2.39 -0.02 -0.61 16 13 O -0.57 0.20 13.09 -148.98 -1.95 -1.75 16 14 C -0.14 -0.31 6.71 31.12 0.21 -0.10 16 15 N -0.51 -0.95 5.99 -171.93 -1.03 -1.98 16 16 C 0.03 0.03 6.47 41.34 0.27 0.30 16 17 C -0.06 0.15 3.08 71.24 0.22 0.37 16 18 O -0.55 -0.20 12.88 -148.98 -1.92 -2.12 16 19 Si 0.80 -2.65 30.56 68.60 2.10 -0.56 16 20 C -0.21 -0.59 9.27 22.01 0.20 -0.39 16 21 H 0.07 0.45 8.14 -2.39 -0.02 0.43 16 22 H 0.08 0.25 8.14 -2.38 -0.02 0.23 16 23 H 0.06 0.67 6.49 -2.38 -0.02 0.66 16 24 H 0.40 0.23 7.90 -92.71 -0.73 -0.50 16 25 H 0.08 -0.26 8.09 -2.39 -0.02 -0.27 16 26 H 0.03 0.23 7.51 -2.39 -0.02 0.21 16 27 H 0.39 -2.03 9.12 -74.05 -0.68 -2.71 16 28 H 0.12 -0.87 8.06 -2.39 -0.02 -0.89 16 29 H 0.08 -0.36 8.13 -2.39 -0.02 -0.38 16 30 H 0.40 -3.52 9.12 -74.06 -0.68 -4.19 16 31 H 0.06 0.59 6.72 -2.39 -0.02 0.58 16 32 H 0.12 -0.25 8.10 -2.38 -0.02 -0.27 16 33 H 0.42 -1.02 8.21 -92.70 -0.76 -1.78 16 34 H 0.13 -0.67 7.96 -2.38 -0.02 -0.69 16 35 H 0.39 -1.62 8.70 -74.06 -0.64 -2.26 16 36 H -0.29 -1.00 7.11 99.48 0.71 -0.30 16 37 H -0.28 -0.31 7.11 99.48 0.71 0.40 16 38 H 0.17 -0.24 6.19 -2.91 -0.02 -0.26 16 Total: 0.00 -22.51 317.80 -5.83 -28.34 By element: Atomic # 1 Polarization: -10.30 SS G_CDS: -2.30 Total: -12.59 kcal Atomic # 6 Polarization: 4.09 SS G_CDS: 3.25 Total: 7.33 kcal Atomic # 7 Polarization: -3.71 SS G_CDS: -2.94 Total: -6.65 kcal Atomic # 8 Polarization: -9.94 SS G_CDS: -5.94 Total: -15.88 kcal Atomic # 14 Polarization: -2.65 SS G_CDS: 2.10 Total: -0.56 kcal Total: -22.51 -5.83 -28.34 kcal The number of atoms in the molecule is 38 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_18341542_13940406.mol2 38 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -66.084 kcal (2) G-P(sol) polarization free energy of solvation -22.509 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -88.593 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -5.834 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -28.343 kcal (6) G-S(sol) free energy of system = (1) + (5) -94.426 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.63 seconds